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The map label for this gene is lafA [H]

Identifier: 126176145

GI number: 126176145

Start: 4649490

End: 4650293

Strand: Reverse

Name: lafA [H]

Synonym: Sbal_3957

Alternate gene names: 126176145

Gene position: 4650293-4649490 (Counterclockwise)

Preceding gene: 126176146

Following gene: 126176144

Centisome position: 90.7

GC content: 45.77

Gene sequence:

>804_bases
ATGTTAGGTGTTCACACTAATTACGCTTCAATTGTTGCTCAAGGTGCTGTTAACAAAAGTAATAACCTACTGACTAACGC
CATGGAGCGTTTGTCTACTGGTTTACGTATCAATAGCGCATCTGATGATGCTGCGGGTTTGCAAATTGCTAACCGCATGA
GCGCTAACGTGAAAGGTATGGAAACAGCTTCACGTAATATTTCTGATGCGACCTCTATGCTACAAACTGCTGATGGCGCG
TTAGAAGAGTTGACGACTATTGCCAACCGCCAGAAAGAATTGGCCACTCAAGCGGCGAACGGTGTGAACTCTGCTGATGA
TTTAACTGCTCTGAATGATGAGTTTACTCAATTAAACACTGAAATTACCCGTATTCTCGATAATACAACTTATGCCGGTA
ATAACCTATTCGCTAAGTTGGAGGCTGGCGTTACCTTCCAAATTGGTGCGGGTACGGGTGAAAAATTGGTTGTTACAACA
ACAGCCATAGATGATGCTGCGCTAGCAGCAGGTGATTTAACTACAGGCGCAAATGCTGCTATTGCCCTTGTTGATACTTT
CATCGCCGCAGTCGGTACTGAGCGTTCTACCTTAGGCGCGAACATTAACCGTCTTGGCCATACTGCGGCTAACCTTGCCA
GTGTGACTGAAAATACTAAAGCCGCCGCCGGCCGTATTATGGATGCCGATTTCGCGGTTGAATCTGCCAATATGACGCGC
AACCAATTATTAGTTCAAGCGGGTACAACGGTTCTGTCTTCAGCTAACCAAAATACAGGTTTAGTGATGGGTCTGCTGCG
CTAA

Upstream 100 bases:

>100_bases
TGAACATAGGTTTTAGTTATTTGTTTTTACTGTCGCCTTAGTTAGTTATACCTGAACTCAGGTCTAACCTAAATGCTCGT
TATTTAATGGAGAACTACAT

Downstream 100 bases:

>100_bases
TTACATTCAGTTCGTCAGTGTTAGTTTTAATGCCAGTGAGCTTAGCTTACTGGCATTTTTTATGGTGTTTGGCGAATACC
ATTTAAGTTTGGATTTTACA

Product: flagellin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGMETASRNISDATSMLQTADGA
LEELTTIANRQKELATQAANGVNSADDLTALNDEFTQLNTEITRILDNTTYAGNNLFAKLEAGVTFQIGAGTGEKLVVTT
TAIDDAALAAGDLTTGANAAIALVDTFIAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMTR
NQLLVQAGTTVLSSANQNTGLVMGLLR

Sequences:

>Translated_267_residues
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGMETASRNISDATSMLQTADGA
LEELTTIANRQKELATQAANGVNSADDLTALNDEFTQLNTEITRILDNTTYAGNNLFAKLEAGVTFQIGAGTGEKLVVTT
TAIDDAALAAGDLTTGANAAIALVDTFIAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMTR
NQLLVQAGTTVLSSANQNTGLVMGLLR
>Mature_267_residues
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGMETASRNISDATSMLQTADGA
LEELTTIANRQKELATQAANGVNSADDLTALNDEFTQLNTEITRILDNTTYAGNNLFAKLEAGVTFQIGAGTGEKLVVTT
TAIDDAALAAGDLTTGANAAIALVDTFIAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMTR
NQLLVQAGTTVLSSANQNTGLVMGLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. Essential for lateral flagellar synthesis and swarming motility [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=161, Percent_Identity=40.9937888198758, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 27549; Mature: 27549

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCH
ETASRNISDATSMLQTADGALEELTTIANRQKELATQAANGVNSADDLTALNDEFTQLNT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EITRILDNTTYAGNNLFAKLEAGVTFQIGAGTGEKLVVTTTAIDDAALAAGDLTTGANAA
HHHHHHCCCEECCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCHHHHCCCCCCCCCHH
IALVDTFIAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMTR
HHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCEECCCCEEECCCCHH
NQLLVQAGTTVLSSANQNTGLVMGLLR
HHHHHHHCHHHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MLGVHTNYASIVAQGAVNKSNNLLTNAMERLSTGLRINSASDDAAGLQIANRMSANVKGM
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCCH
ETASRNISDATSMLQTADGALEELTTIANRQKELATQAANGVNSADDLTALNDEFTQLNT
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EITRILDNTTYAGNNLFAKLEAGVTFQIGAGTGEKLVVTTTAIDDAALAAGDLTTGANAA
HHHHHHCCCEECCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCHHHHCCCCCCCCCHH
IALVDTFIAAVGTERSTLGANINRLGHTAANLASVTENTKAAAGRIMDADFAVESANMTR
HHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCHHHHHCCEECCCCEEECCCCHH
NQLLVQAGTTVLSSANQNTGLVMGLLR
HHHHHHHCHHHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]