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The map label for this gene is yniC [H]

Identifier: 126176096

GI number: 126176096

Start: 4591096

End: 4591755

Strand: Direct

Name: yniC [H]

Synonym: Sbal_3906

Alternate gene names: 126176096

Gene position: 4591096-4591755 (Clockwise)

Preceding gene: 126176094

Following gene: 126176097

Centisome position: 89.54

GC content: 47.73

Gene sequence:

>660_bases
ATGACATCCCTTAGCATTCAAGCCGTTATTTTTGATATGGATGGCGTTTTAATCGATTCAGAACCCCTATGGCAGCAGGT
CGAGTATGAAGTGTTATCCGCACTTGGCGTGCCCGTGACCATAGAAACGATTCAACAAACCACAGGTTTACGCATCGACC
AATGCGTGGATTATTGGTACCACAAGGCTCCTTGGCCTCACTACGACAATGCCAAGGTCAGCCAAGCGATTGTTGATAAG
GTCGCGAGTGAAATTCTGATTAGCGGCGAAGCTATGCTGGGCGTTCACGAAGCAATTGATCACTGCCAAACGCTGGGTCT
TAAAATCGGCTTAGCGACTTCATCCCCAAATACTATTATCCAAGCAGTATTAACTAAGTTAGATCTCAGTGAAAAGTTTA
TGGCGATAGAATCGGCTGAACACCTGATCTACGGCAAGCCACACCCTGAAGTATATTTGAATTGCGCTAAGGCGTTAGAT
GTCGATCCCCGCTATTGCCTTGCGATCGAAGATTCTTTTAACGGCTTAATTGCCGCCCGAGCGGCCAATATGCAAACGCT
TGCGATCCCCGCACCAGAGCAAAGAGGCGAAGCTAAGTGGGTTATCGCCCACCATCAGGCTGAGAACTTATTGGCCTTGC
CGACACTCTTAGCTCAATAA

Upstream 100 bases:

>100_bases
ATCTTGCGGCATTTTGGCTTTTAAGATGCGGTGCGAGAACTTACACTCAGGCTTAATTTACTGCATATCTCAGTTATTTC
CCCAGTCCATCGGAGTACCA

Downstream 100 bases:

>100_bases
CGCCATAACACGCCTAGCCTTAGCTGGGCGGATAAGCTGAATTTTGGCCATATGGATAATGAGTTTTTACCATTTGGATG
AATAGCAGAATGATGTATGT

Product: 2-deoxyglucose-6-phosphatase

Products: glycerol; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTSLSIQAVIFDMDGVLIDSEPLWQQVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWYHKAPWPHYDNAKVSQAIVDK
VASEILISGEAMLGVHEAIDHCQTLGLKIGLATSSPNTIIQAVLTKLDLSEKFMAIESAEHLIYGKPHPEVYLNCAKALD
VDPRYCLAIEDSFNGLIAARAANMQTLAIPAPEQRGEAKWVIAHHQAENLLALPTLLAQ

Sequences:

>Translated_219_residues
MTSLSIQAVIFDMDGVLIDSEPLWQQVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWYHKAPWPHYDNAKVSQAIVDK
VASEILISGEAMLGVHEAIDHCQTLGLKIGLATSSPNTIIQAVLTKLDLSEKFMAIESAEHLIYGKPHPEVYLNCAKALD
VDPRYCLAIEDSFNGLIAARAANMQTLAIPAPEQRGEAKWVIAHHQAENLLALPTLLAQ
>Mature_218_residues
TSLSIQAVIFDMDGVLIDSEPLWQQVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWYHKAPWPHYDNAKVSQAIVDKV
ASEILISGEAMLGVHEAIDHCQTLGLKIGLATSSPNTIIQAVLTKLDLSEKFMAIESAEHLIYGKPHPEVYLNCAKALDV
DPRYCLAIEDSFNGLIAARAANMQTLAIPAPEQRGEAKWVIAHHQAENLLALPTLLAQ

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates 2-deoxyglucose 6-phosphate and mannose 6- phosphate [H]

COG id: COG0637

COG function: function code R; Predicted phosphatase/phosphohexomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Homo sapiens, GI197382691, Length=192, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=8e-11,
Organism=Escherichia coli, GI1788021, Length=213, Percent_Identity=43.6619718309859, Blast_Score=191, Evalue=3e-50,
Organism=Escherichia coli, GI1789046, Length=185, Percent_Identity=30.2702702702703, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1787576, Length=198, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17554716, Length=196, Percent_Identity=25.5102040816327, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17137324, Length=209, Percent_Identity=27.7511961722488, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116008157, Length=213, Percent_Identity=27.2300469483568, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI20129151, Length=197, Percent_Identity=28.9340101522843, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: 3.1.3.21

Molecular weight: Translated: 24069; Mature: 23938

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSIQAVIFDMDGVLIDSEPLWQQVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWY
CCCCEEEEEEEECCCEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCHHHHHHHHH
HKAPWPHYDNAKVSQAIVDKVASEILISGEAMLGVHEAIDHCQTLGLKIGLATSSPNTII
HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHH
QAVLTKLDLSEKFMAIESAEHLIYGKPHPEVYLNCAKALDVDPRYCLAIEDSFNGLIAAR
HHHHHHHCCHHHHHHHHCCCCEEECCCCCHHEEEHHHHCCCCCCEEEEEECCCCCEEEEE
AANMQTLAIPAPEQRGEAKWVIAHHQAENLLALPTLLAQ
CCCCEEEEECCCCCCCCEEEEEEECCCCCEEHHHHHHCC
>Mature Secondary Structure 
TSLSIQAVIFDMDGVLIDSEPLWQQVEYEVLSALGVPVTIETIQQTTGLRIDQCVDYWY
CCCEEEEEEEECCCEEECCCHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCHHHHHHHHH
HKAPWPHYDNAKVSQAIVDKVASEILISGEAMLGVHEAIDHCQTLGLKIGLATSSPNTII
HCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEEECCCCHHHH
QAVLTKLDLSEKFMAIESAEHLIYGKPHPEVYLNCAKALDVDPRYCLAIEDSFNGLIAAR
HHHHHHHCCHHHHHHHHCCCCEEECCCCCHHEEEHHHHCCCCCCEEEEEECCCCCEEEEE
AANMQTLAIPAPEQRGEAKWVIAHHQAENLLALPTLLAQ
CCCCEEEEECCCCCCCCEEEEEEECCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: glycerol 1-phosphate; H2O

Specific reaction: glycerol 1-phosphate + H2O = glycerol + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]