| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yigP [H]
Identifier: 126176086
GI number: 126176086
Start: 4573802
End: 4574422
Strand: Direct
Name: yigP [H]
Synonym: Sbal_3896
Alternate gene names: 126176086
Gene position: 4573802-4574422 (Clockwise)
Preceding gene: 126176085
Following gene: 126176087
Centisome position: 89.2
GC content: 48.95
Gene sequence:
>621_bases ATGATGCCGCAAGAAGTTGTGCTGCTTGTCTGCGCCGCAATTGAAACGGGCCTGAAAAAACTTCAGGCTCAAGCGGGTGA CGACTATTCACGCCAGCGCCAGTTGCATGGCAAAGTGTTTCGCATCCAATTATCGCAGCTCAGCTGGCCACTCTATTTGG TGTTTGCCAAAGAGATCCAAGTACTGAGCCGCTATGAAGGTGATATCGATGTCAGTCTGCATGCCGATGCGACCACGCTT TATCGCGTGTCCGAAGGTGCAAACCTGACTGAACTTATCAAGCAAGATAAGCTCAAGCTTGAGGGCGATCTCAATTTATT ACAAAGCTTTAGCCAATATCTACGCGGCATCGAGTTTGACTTTGCCGAGCCAATTTCGCGTTATTTAGGCGATGGTCCCA CCCACAAGCTCATCAGCACAAGCCATCAGGCAAAAGGTTTTGCACTCGAAGTGTTGCGTAAAACGCGCTCCCATTTAGGG CAACTCGCCGTTGAAGAGTATCGCCTCGCACCGCACCCAATTGAGTTACTTCATTTTCGCGATCAAATGGATGATTTAGT TGCCGATACCCGCGCGATTGAACAACGGATTGCCCAATTAAGAGACCAAATTAAGCCATGA
Upstream 100 bases:
>100_bases ACACATTAAAACAAATGATGGTGGATGCAGGCTTCGAACAAGTCGACTACACCAACATGACCGACGGCATTGTCGCATTG CACCGTGGTTATAAATTCTA
Downstream 100 bases:
>100_bases CCCTTGCCAGTATCCGCCGCGGTTACCATGTCATCAAGACCTTGCTTCAGTACGGGTTAGATGACGTATTGCCGCCAAAG ATGACACCTTGGTACTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MMPQEVVLLVCAAIETGLKKLQAQAGDDYSRQRQLHGKVFRIQLSQLSWPLYLVFAKEIQVLSRYEGDIDVSLHADATTL YRVSEGANLTELIKQDKLKLEGDLNLLQSFSQYLRGIEFDFAEPISRYLGDGPTHKLISTSHQAKGFALEVLRKTRSHLG QLAVEEYRLAPHPIELLHFRDQMDDLVADTRAIEQRIAQLRDQIKP
Sequences:
>Translated_206_residues MMPQEVVLLVCAAIETGLKKLQAQAGDDYSRQRQLHGKVFRIQLSQLSWPLYLVFAKEIQVLSRYEGDIDVSLHADATTL YRVSEGANLTELIKQDKLKLEGDLNLLQSFSQYLRGIEFDFAEPISRYLGDGPTHKLISTSHQAKGFALEVLRKTRSHLG QLAVEEYRLAPHPIELLHFRDQMDDLVADTRAIEQRIAQLRDQIKP >Mature_206_residues MMPQEVVLLVCAAIETGLKKLQAQAGDDYSRQRQLHGKVFRIQLSQLSWPLYLVFAKEIQVLSRYEGDIDVSLHADATTL YRVSEGANLTELIKQDKLKLEGDLNLLQSFSQYLRGIEFDFAEPISRYLGDGPTHKLISTSHQAKGFALEVLRKTRSHLG QLAVEEYRLAPHPIELLHFRDQMDDLVADTRAIEQRIAQLRDQIKP
Specific function: Unknown
COG id: COG3165
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367308, Length=193, Percent_Identity=27.4611398963731, Blast_Score=86, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003033 [H]
Pfam domain/function: PF02036 SCP2 [H]
EC number: NA
Molecular weight: Translated: 23510; Mature: 23510
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPQEVVLLVCAAIETGLKKLQAQAGDDYSRQRQLHGKVFRIQLSQLSWPLYLVFAKEIQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHEEEHHHCCCHHHHHHHHHHH VLSRYEGDIDVSLHADATTLYRVSEGANLTELIKQDKLKLEGDLNLLQSFSQYLRGIEFD HHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC FAEPISRYLGDGPTHKLISTSHQAKGFALEVLRKTRSHLGQLAVEEYRLAPHPIELLHFR HHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DQMDDLVADTRAIEQRIAQLRDQIKP HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMPQEVVLLVCAAIETGLKKLQAQAGDDYSRQRQLHGKVFRIQLSQLSWPLYLVFAKEIQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHEEEHHHCCCHHHHHHHHHHH VLSRYEGDIDVSLHADATTLYRVSEGANLTELIKQDKLKLEGDLNLLQSFSQYLRGIEFD HHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC FAEPISRYLGDGPTHKLISTSHQAKGFALEVLRKTRSHLGQLAVEEYRLAPHPIELLHFR HHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DQMDDLVADTRAIEQRIAQLRDQIKP HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]