Click here to switch to the map view.

The map label for this gene is hslV [H]

Identifier: 126176058

GI number: 126176058

Start: 4541720

End: 4542244

Strand: Direct

Name: hslV [H]

Synonym: Sbal_3867

Alternate gene names: 126176058

Gene position: 4541720-4542244 (Clockwise)

Preceding gene: 126176057

Following gene: 126176059

Centisome position: 88.58

GC content: 51.43

Gene sequence:

>525_bases
GTGACCACTATCGTATCAGTACGCCGTAATAATCAAGTTGTCATCGCCGGCGATGGCCAAGTCTCCCTAGGCAATACCGT
GATGAAAGGTAACGCCAAAAAAGTGCGTCGCTTATATCACAACAAGGTACTGGCAGGTTTTGCAGGCGGCACCGCCGATG
CTTTCACCCTATTCGAGCGTTTTGAGGCCAAACTCGAAATGCACCAAGGCCATTTATTGCGCTCGGCCGTTGAGCTCGCC
AAAGATTGGCGTACCGACCGTATGCTGCGCAAACTCGAAGCCCTACTCGTCGTGGCCGATGCCGAAACCTCGCTGATCAT
CACAGGTAATGGTGATGTCGTTCAGCCAGAACACGACTTAGTCGCCATTGGTTCAGGCGGCAACTATGCCCAAGCGGCGG
CCCTTGCGTTATTGCAAAATACCGAGCTGTCGGCCCTAGAAATCGCTGAAAAATCCCTGACCATTGCCGCGGATATCTGC
GTATTCACCAATCAATTCAAGACGATTGAAGAACTCAATTACTAA

Upstream 100 bases:

>100_bases
GCTTTTCTCGCTATAACTTGAATTATTGTCATCTATCCCCATATCTACTCCATCATCCACCGCATGATTTGTCATTGCGG
GCCAGAGAAGAGGATTCATT

Downstream 100 bases:

>100_bases
ACAGCCCGTGAGGAATATTATGTCTGAAATGACCCCCCGTGAGATTGTCCACGAGCTGGATGCACACATTATTGGCCAAC
AAAAGGCCAAACGTTCTGTT

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERFEAKLEMHQGHLLRSAVELA
KDWRTDRMLRKLEALLVVADAETSLIITGNGDVVQPEHDLVAIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAADIC
VFTNQFKTIEELNY

Sequences:

>Translated_174_residues
MTTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERFEAKLEMHQGHLLRSAVELA
KDWRTDRMLRKLEALLVVADAETSLIITGNGDVVQPEHDLVAIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAADIC
VFTNQFKTIEELNY
>Mature_173_residues
TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFERFEAKLEMHQGHLLRSAVELAK
DWRTDRMLRKLEALLVVADAETSLIITGNGDVVQPEHDLVAIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAADICV
FTNQFKTIEELNY

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=174, Percent_Identity=82.183908045977, Blast_Score=295, Evalue=1e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 18928; Mature: 18797

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFER
CCEEEEEECCCEEEEEECCCEEECCEEEECCHHHHHHHHHHHHEEECCCCCHHHHHHHHH
FEAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEALLVVADAETSLIITGNGDVVQPEHDL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCEEEEECCCCEECCCCCE
VAIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAADICVFTNQFKTIEELNY
EEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure 
TTIVSVRRNNQVVIAGDGQVSLGNTVMKGNAKKVRRLYHNKVLAGFAGGTADAFTLFER
CEEEEEECCCEEEEEECCCEEECCEEEECCHHHHHHHHHHHHEEECCCCCHHHHHHHHH
FEAKLEMHQGHLLRSAVELAKDWRTDRMLRKLEALLVVADAETSLIITGNGDVVQPEHDL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCEEEEECCCCEECCCCCE
VAIGSGGNYAQAAALALLQNTELSALEIAEKSLTIAADICVFTNQFKTIEELNY
EEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEEEHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA