| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176046
Identifier: 126176046
GI number: 126176046
Start: 4529441
End: 4529920
Strand: Reverse
Name: 126176046
Synonym: Sbal_3855
Alternate gene names: NA
Gene position: 4529920-4529441 (Counterclockwise)
Preceding gene: 126176052
Following gene: 126176045
Centisome position: 88.35
GC content: 42.92
Gene sequence:
>480_bases ATGAAAACGCTGTTGTTATGTCTGTCTTGTCTATTAACCCCCATGTGGGCGTATGCTGCGAGTTATGTTGCTGGCGATGC GATTAATCCTATTTCACTTCTCGATCAAAATGATCAAACGATAAGTGTGACAGATGAAACTCAAGTTTTACTCTTTAGCC GCAGCATGAAAGGCGGCGATGTGATTAAAGAAGCACTCACGCCTCTGAGTATGACTCAAATGCCTGCTGGGTTAGTTTAT GTCGCGGATATCAGTGGCATGCCTTCTTTAATCGCTAAGTTTGTTGCTGTGCCACAAATGCAAGATTTACCCTTTGCGAT TGGGTTAGATAGGGAAGGTGAGATCAGTCGTTTATTACCCGATACCAAAGATATGGCCACTATGATATTGCTCAATCAGC GTAATATTTTAGATATCGCCTATTTTGATTCCAGTGAAGCCTTGGGCCAAGCACTCGCAAAATTGAATCAGCCGCAGTAA
Upstream 100 bases:
>100_bases TGCATGTGTGAAGCGTATCATGTAATCGCGGTTGGTTTAATGAGTCGATAGGGGGAGTCAGGTATGCTGTCCGCCTATCC AATAATGGAGTCGAGTGTTT
Downstream 100 bases:
>100_bases CGATTCAATTTACTTGAACTATTTTAAGGCATCAGATTAGCTTTCTTTCGTGGCGCTCGCCCCCTCAAGTTTATCGCTTT GGGATGGAAATGTTGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTISVTDETQVLLFSRSMKGGDVIKEALTPLSMTQMPAGLVY VADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLPDTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ
Sequences:
>Translated_159_residues MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTISVTDETQVLLFSRSMKGGDVIKEALTPLSMTQMPAGLVY VADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLPDTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ >Mature_159_residues MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTISVTDETQVLLFSRSMKGGDVIKEALTPLSMTQMPAGLVY VADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLPDTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17281; Mature: 17281
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTISVTDETQVLLFSRSMKGGD CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCEEEEEECCCCCHH VIKEALTPLSMTQMPAGLVYVADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLP HHHHHHCCCCHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCC DTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ CCHHHHHHEEECCCCEEEEEEECCHHHHHHHHHHCCCCC >Mature Secondary Structure MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTISVTDETQVLLFSRSMKGGD CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCEEEEEECCCCCHH VIKEALTPLSMTQMPAGLVYVADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLP HHHHHHCCCCHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCC DTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ CCHHHHHHEEECCCCEEEEEEECCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA