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The map label for this gene is 126176024

Identifier: 126176024

GI number: 126176024

Start: 4505057

End: 4506397

Strand: Reverse

Name: 126176024

Synonym: Sbal_3833

Alternate gene names: NA

Gene position: 4506397-4505057 (Counterclockwise)

Preceding gene: 126176025

Following gene: 126176023

Centisome position: 87.89

GC content: 52.57

Gene sequence:

>1341_bases
ATGAGCGTGATCAACAAGATGCTGCAGGATCTCGACAAACGTCAGCAGGGGCACGAACTTAGTAACGTCACTCAACCGCA
GGTGCAATATTTAGCTCGCAGGCGTTCATCATCTCACTGGCTGCCGCTCTGTGGTTTGTCACTGCTACTCGGTGGCGGCG
CGGTTTATGGCTGGCAATTTTTCATGGCAGAGCCTGCAGAAGCGACAGCTTCAGCTCAAGCGCAGGAACAACATACATTA
ACCGCCCAAAATGAGCCTGTGCGGATGGAGAGTCTTGTCTCAAAAGAGTCTTCACCTAGCGTCGATGCCGCTGCTGAACC
ATTGAAGCTTGCGACTGCGCAGAAGATTGCGGCAGCGATGACAGCGAATAGTGAAGAGTTTGAACCAAGTGCCAGCGACG
TGGCATCGAGTCAGGCACCAGAATTGGGAACCGCAAAAGAGGCTGAACCTGAGCGACAAGCGCAGCCACAACAAAAACCA
CAAGCAGATGTGAGCCTTGCACTCGCAGCGGACAAGGTCGATACGGTAAGCGAGCCAAGCCATTCACAGCCAAATCGTGC
GACATCGAGTGTGCGTAGCGCCGAGGTCACTGTAGCCGCGCCCTCTGCATTAATGATGTCGGAGCGGGCCAGTGTTGCCG
CCGATAATGAAGGTAACGCGAGCAATGGGCTTAACGTACAAGAAGTTAAAGCAGATGCAGGCACTCATCAACTCGCGCCC
AAAGAACAAGGGCAAATGGCGATTACTGAGGTTAAGTTAACGCCAAAGCAGCTGGCAAAGAAGCGGTTCACGTTAGCGAG
CGAGGCCGAAAGGGATGGCAAGCTCAAAGAGGCCATTAGTTATTATGAGCAAACCTTGGCGCTTGAACCCAGCATGCACG
AAGCGCGCAAGCAATTGGCTGCACTGCATTATGGCCAAGGTCAATTAGCCAAAGCCAGTGAAGTGTTACAGCAAGGTATG
CTGTTATTCCCGCAGCAATTAGACTTCGCCTTATTGCTCGCTCGGGTTCAGCAAGCCGCTGGTCAGGCTGATCTCGCATT
AGCGACGTTAGCCAACATACCTGATACGCATCCGCTGGCGAGACAAAAGTGGATGGCACAATCGGATTTGGCACAAAAGC
TAGGGCAGTTTTCAGTGTCGGAACAAGCCTACAGGCAGTTATTACAACAAGAACCTCAACAGGCTAAATGGTGGATGGGA
CTGGCTTATGCGCTTGATTCGCAGCAGCAATTTCTCCAAGCACGCCAAGCCTATCGGACTGCGTTAGGCCACAGAGGCTT
ATCGGCGCAGGCGAGTGCCTTTATCGAACAACGTTTGACTCAGCTAGGAGATAGCCAATGA

Upstream 100 bases:

>100_bases
CGAGCGTGCGCCGATTATTGTCGTGGAAATGGCTGCCTTTTTTCACTCTGATAACTGTGGTGTTCGGTTTGGGATTACAA
CACGTTTTGAGGAGTGTTGT

Downstream 100 bases:

>100_bases
AACCCAGATTAAAAATGCGTTTGGGCGATCTGTTAGTTCAAGAAGCCATTATTACCGAAGCGCAGTTGCAACAGGCGTTA
GGCGAGCAGCGTAATACGGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: MSHA Biogenesis Protein MshN; MshA Biogenesis Protein MshN-Like; TPR Domain-Containing Protein; Type IV Pilus Mannose-Sensitive Hemagglutinin D; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MSVINKMLQDLDKRQQGHELSNVTQPQVQYLARRRSSSHWLPLCGLSLLLGGGAVYGWQFFMAEPAEATASAQAQEQHTL
TAQNEPVRMESLVSKESSPSVDAAAEPLKLATAQKIAAAMTANSEEFEPSASDVASSQAPELGTAKEAEPERQAQPQQKP
QADVSLALAADKVDTVSEPSHSQPNRATSSVRSAEVTVAAPSALMMSERASVAADNEGNASNGLNVQEVKADAGTHQLAP
KEQGQMAITEVKLTPKQLAKKRFTLASEAERDGKLKEAISYYEQTLALEPSMHEARKQLAALHYGQGQLAKASEVLQQGM
LLFPQQLDFALLLARVQQAAGQADLALATLANIPDTHPLARQKWMAQSDLAQKLGQFSVSEQAYRQLLQQEPQQAKWWMG
LAYALDSQQQFLQARQAYRTALGHRGLSAQASAFIEQRLTQLGDSQ

Sequences:

>Translated_446_residues
MSVINKMLQDLDKRQQGHELSNVTQPQVQYLARRRSSSHWLPLCGLSLLLGGGAVYGWQFFMAEPAEATASAQAQEQHTL
TAQNEPVRMESLVSKESSPSVDAAAEPLKLATAQKIAAAMTANSEEFEPSASDVASSQAPELGTAKEAEPERQAQPQQKP
QADVSLALAADKVDTVSEPSHSQPNRATSSVRSAEVTVAAPSALMMSERASVAADNEGNASNGLNVQEVKADAGTHQLAP
KEQGQMAITEVKLTPKQLAKKRFTLASEAERDGKLKEAISYYEQTLALEPSMHEARKQLAALHYGQGQLAKASEVLQQGM
LLFPQQLDFALLLARVQQAAGQADLALATLANIPDTHPLARQKWMAQSDLAQKLGQFSVSEQAYRQLLQQEPQQAKWWMG
LAYALDSQQQFLQARQAYRTALGHRGLSAQASAFIEQRLTQLGDSQ
>Mature_445_residues
SVINKMLQDLDKRQQGHELSNVTQPQVQYLARRRSSSHWLPLCGLSLLLGGGAVYGWQFFMAEPAEATASAQAQEQHTLT
AQNEPVRMESLVSKESSPSVDAAAEPLKLATAQKIAAAMTANSEEFEPSASDVASSQAPELGTAKEAEPERQAQPQQKPQ
ADVSLALAADKVDTVSEPSHSQPNRATSSVRSAEVTVAAPSALMMSERASVAADNEGNASNGLNVQEVKADAGTHQLAPK
EQGQMAITEVKLTPKQLAKKRFTLASEAERDGKLKEAISYYEQTLALEPSMHEARKQLAALHYGQGQLAKASEVLQQGML
LFPQQLDFALLLARVQQAAGQADLALATLANIPDTHPLARQKWMAQSDLAQKLGQFSVSEQAYRQLLQQEPQQAKWWMGL
AYALDSQQQFLQARQAYRTALGHRGLSAQASAFIEQRLTQLGDSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48388; Mature: 48257

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVINKMLQDLDKRQQGHELSNVTQPQVQYLARRRSSSHWLPLCGLSLLLGGGAVYGWQF
CHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHH
FMAEPAEATASAQAQEQHTLTAQNEPVRMESLVSKESSPSVDAAAEPLKLATAQKIAAAM
HHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHH
TANSEEFEPSASDVASSQAPELGTAKEAEPERQAQPQQKPQADVSLALAADKVDTVSEPS
HCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEHHHHHCCCCCC
HSQPNRATSSVRSAEVTVAAPSALMMSERASVAADNEGNASNGLNVQEVKADAGTHQLAP
CCCCCHHHHHHHHCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCC
KEQGQMAITEVKLTPKQLAKKRFTLASEAERDGKLKEAISYYEQTLALEPSMHEARKQLA
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
ALHYGQGQLAKASEVLQQGMLLFPQQLDFALLLARVQQAAGQADLALATLANIPDTHPLA
HHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
RQKWMAQSDLAQKLGQFSVSEQAYRQLLQQEPQQAKWWMGLAYALDSQQQFLQARQAYRT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGHRGLSAQASAFIEQRLTQLGDSQ
HHHCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVINKMLQDLDKRQQGHELSNVTQPQVQYLARRRSSSHWLPLCGLSLLLGGGAVYGWQF
HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHH
FMAEPAEATASAQAQEQHTLTAQNEPVRMESLVSKESSPSVDAAAEPLKLATAQKIAAAM
HHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHCHHHHHHHHHHHHHH
TANSEEFEPSASDVASSQAPELGTAKEAEPERQAQPQQKPQADVSLALAADKVDTVSEPS
HCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEEHHHHHCCCCCC
HSQPNRATSSVRSAEVTVAAPSALMMSERASVAADNEGNASNGLNVQEVKADAGTHQLAP
CCCCCHHHHHHHHCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCC
KEQGQMAITEVKLTPKQLAKKRFTLASEAERDGKLKEAISYYEQTLALEPSMHEARKQLA
CCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
ALHYGQGQLAKASEVLQQGMLLFPQQLDFALLLARVQQAAGQADLALATLANIPDTHPLA
HHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
RQKWMAQSDLAQKLGQFSVSEQAYRQLLQQEPQQAKWWMGLAYALDSQQQFLQARQAYRT
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGHRGLSAQASAFIEQRLTQLGDSQ
HHHCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA