| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yhbJ [C]
Identifier: 126175866
GI number: 126175866
Start: 4290122
End: 4290976
Strand: Direct
Name: yhbJ [C]
Synonym: Sbal_3671
Alternate gene names: 126175866
Gene position: 4290122-4290976 (Clockwise)
Preceding gene: 126175865
Following gene: 126175867
Centisome position: 83.67
GC content: 46.32
Gene sequence:
>855_bases ATGAAACTGGTCATAGTGTCGGGCCGCTCAGGCTCAGGCAAATCTGTCGCCCTAAGGGTACTCGAAGATCTCGGCTATTA TTGTGTCGATAATCTTCCCTTGCCATTAATTGGCAGTTTGCTTGAGCAACTCAAAGGCAGTAACGATCTCGTCGCCATCA GTGTCGACGTGCGTAATATGCCTGAGCAGGATAAAGTCTTAGTGAAGCAACTCGCAAGCCTGCCTCCTGATACTGAGTTA ACGAGTTTTTTCCTCAATTCCAGCGATAAAATTCTGCTCAAGCGTTACAGCGAAACCCGCCGTTTGCACCCTTTGTCGAA GAGCCAAGTCTCTTTGCAAGAAGCAATAAAACTGGAAGGGAAACTGCTCGAGCCTATGTCAAAACTGGTCGATCACTACA TAGATACGTCGAATTTGAATATCTATGATTTAAGCGATCAAGTGAGACAAATTCTACTCGGCAGCGTCGATAAAGAGTTA GTGATCAACTTCGAGTCCTTTGGCTTTAAGCACGGTATGCCAACCGAAGCCGACTTTATGTTCGATGTACGCTTCCTGCC TAACCCACACTGGGAACTGGCGCTGCGTCCATTGACAGGCTTAGATGAACCCGTGGCTGAGTTCTTAAATCGTCAACCAC TCGTGAATAAGTTCATCTGGCAAATCGAAAATTTACTGGAAACTTGGCTGCCGCATCTCGAACGCAACAATCGCAGTTAT TTAACTGTGGCGATTGGCTGCACAGGTGGACAACACAGATCGGTTTACGTCGCAGAGCAATTGGCTAAACGCTTTAGTAA CGGTAAACATAAAGTTTATGCCCGCCATCGAGAGCTAAATAATGCCAAAGCTTGA
Upstream 100 bases:
>100_bases GTACCTTGTCTTGCATGGCCGAAAAGCTGAGCGACAAGCAAATATTAAAGCAATTACGCAAGACGCATGATGAAACGGAA CTCTATCAGGTAATCACTGG
Downstream 100 bases:
>100_bases ACGTCAGATCACCATCTGTAACAAACTGGGATTACATGCCCGTGCCGCCACTAAGTTGGTGGTACTGGCATCCGAGTTTG ATGCGACTATCACCTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNMPEQDKVLVKQLASLPPDTEL TSFFLNSSDKILLKRYSETRRLHPLSKSQVSLQEAIKLEGKLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILLGSVDKEL VINFESFGFKHGMPTEADFMFDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY LTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRELNNAKA
Sequences:
>Translated_284_residues MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNMPEQDKVLVKQLASLPPDTEL TSFFLNSSDKILLKRYSETRRLHPLSKSQVSLQEAIKLEGKLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILLGSVDKEL VINFESFGFKHGMPTEADFMFDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY LTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRELNNAKA >Mature_284_residues MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNMPEQDKVLVKQLASLPPDTEL TSFFLNSSDKILLKRYSETRRLHPLSKSQVSLQEAIKLEGKLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILLGSVDKEL VINFESFGFKHGMPTEADFMFDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY LTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRELNNAKA
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=283, Percent_Identity=54.7703180212014, Blast_Score=325, Evalue=2e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 32252; Mature: 32252
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNM CEEEEEECCCCCCHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCC PEQDKVLVKQLASLPPDTELTSFFLNSSDKILLKRYSETRRLHPLSKSQVSLQEAIKLEG CHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC KLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM HHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCHHHEEEHHHHCCCCCCCCCCCEE FDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY EEEEECCCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE LTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRELNNAKA EEEEEECCCCCCCEEHHHHHHHHHHCCCCEEEHHHHHHHCCCCC >Mature Secondary Structure MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNM CEEEEEECCCCCCHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCC PEQDKVLVKQLASLPPDTELTSFFLNSSDKILLKRYSETRRLHPLSKSQVSLQEAIKLEG CHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC KLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM HHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHCCCCHHHEEEHHHHCCCCCCCCCCCEE FDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY EEEEECCCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE LTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRELNNAKA EEEEEECCCCCCCEEHHHHHHHHHHCCCCEEEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA