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The map label for this gene is ydiY [C]

Identifier: 126175839

GI number: 126175839

Start: 4265568

End: 4266311

Strand: Direct

Name: ydiY [C]

Synonym: Sbal_3644

Alternate gene names: 126175839

Gene position: 4265568-4266311 (Clockwise)

Preceding gene: 126175834

Following gene: 126175840

Centisome position: 83.19

GC content: 43.68

Gene sequence:

>744_bases
ATGCTAAAAGTTATTGCGCCAATCTTTTTATTTTCCCTTTCATTTCCTGCGCTTGCGCTTGTTCCACCTGATTATCAGGA
ACCGCCCAGCGATTTTACCGCAGAAATCGAAGCGGGTTTGCAACTGAATACAGGCAATACCGAATCCAGCAGTTTTAACG
GTCGAACCCAACTGATTTACGACACTAAGCAAACCAAGCAAGAAGCCACGCTCAAAGCCTACTTTGCCTCAGAAAAAAGC
AAGACGACTTCCGAAAAATACGAACTCCAACTCCAGTCGAACTATAAACTCACTAAGGGTTATATCTTCGGACGCGGTGA
TTTTACCTGGGATCAATTCGGTAGTTACACGCAAATATCAACTATTTCGAGTGGTTACGGTTTTAATGCCATCAGTAGCT
ACAAGACCAAACTCAGTCTCGAAGTCGGCCCCGGTTATCGATATAACTTACCGGCCGAATCTGTCGATATTCCCAATCCT
GATGCTGAGAAAGATGTCATTCTGCGTACCGCGGCAAAGTTTTCTCAAAAACTGCAGGAATACAGCAGTCTCAATGCCGA
TTTAACTGCGGAAATGGGCGAGAACAACAATACCCTTACCTTAGACATGAACTACAAGAATCTGGTGTTCCAAGATTGGG
CTTTTAAAATCGGCATGAACATCAAATACACTGAAGTAGTTCCAGAAGGTAGCCAGCAGACAGATACCATCACCACCTTC
AACCTGCTTTATACCTTTAGATAA

Upstream 100 bases:

>100_bases
GAAACTCAAGCAATAACTTTGCCTCGCCAATCAATACAGGTATGATGGCGCTTCATCTATATTCGGACGTCTGACATCAG
CTAACCAAGAATAAAACATA

Downstream 100 bases:

>100_bases
CCGCTTTTAGATAATCCGTAGCAATATAAGCAAGCACACGGCGCCAATGTCATCTTCGGCTGGCGTCAATGTTAAAGTTA
CTCAGCCCCCTCTCAAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLKVIAPIFLFSLSFPALALVPPDYQEPPSDFTAEIEAGLQLNTGNTESSSFNGRTQLIYDTKQTKQEATLKAYFASEKS
KTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSYTQISTISSGYGFNAISSYKTKLSLEVGPGYRYNLPAESVDIPNP
DAEKDVILRTAAKFSQKLQEYSSLNADLTAEMGENNNTLTLDMNYKNLVFQDWAFKIGMNIKYTEVVPEGSQQTDTITTF
NLLYTFR

Sequences:

>Translated_247_residues
MLKVIAPIFLFSLSFPALALVPPDYQEPPSDFTAEIEAGLQLNTGNTESSSFNGRTQLIYDTKQTKQEATLKAYFASEKS
KTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSYTQISTISSGYGFNAISSYKTKLSLEVGPGYRYNLPAESVDIPNP
DAEKDVILRTAAKFSQKLQEYSSLNADLTAEMGENNNTLTLDMNYKNLVFQDWAFKIGMNIKYTEVVPEGSQQTDTITTF
NLLYTFR
>Mature_247_residues
MLKVIAPIFLFSLSFPALALVPPDYQEPPSDFTAEIEAGLQLNTGNTESSSFNGRTQLIYDTKQTKQEATLKAYFASEKS
KTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSYTQISTISSGYGFNAISSYKTKLSLEVGPGYRYNLPAESVDIPNP
DAEKDVILRTAAKFSQKLQEYSSLNADLTAEMGENNNTLTLDMNYKNLVFQDWAFKIGMNIKYTEVVPEGSQQTDTITTF
NLLYTFR

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=231, Percent_Identity=24.2424242424242, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27809; Mature: 27809

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVIAPIFLFSLSFPALALVPPDYQEPPSDFTAEIEAGLQLNTGNTESSSFNGRTQLIY
CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCEEEEE
DTKQTKQEATLKAYFASEKSKTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSYTQIS
ECCHHHHHHHEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHCCCEEEEE
TISSGYGFNAISSYKTKLSLEVGPGYRYNLPAESVDIPNPDAEKDVILRTAAKFSQKLQE
EECCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YSSLNADLTAEMGENNNTLTLDMNYKNLVFQDWAFKIGMNIKYTEVVPEGSQQTDTITTF
HHHCCCCEEEECCCCCCEEEEEECCCCEEEECEEEEECCCEEEEEECCCCCCCCCEEEEE
NLLYTFR
EEEEEEC
>Mature Secondary Structure
MLKVIAPIFLFSLSFPALALVPPDYQEPPSDFTAEIEAGLQLNTGNTESSSFNGRTQLIY
CCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCEEEEE
DTKQTKQEATLKAYFASEKSKTTSEKYELQLQSNYKLTKGYIFGRGDFTWDQFGSYTQIS
ECCHHHHHHHEEEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHCCCEEEEE
TISSGYGFNAISSYKTKLSLEVGPGYRYNLPAESVDIPNPDAEKDVILRTAAKFSQKLQE
EECCCCCCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YSSLNADLTAEMGENNNTLTLDMNYKNLVFQDWAFKIGMNIKYTEVVPEGSQQTDTITTF
HHHCCCCEEEECCCCCCEEEEEECCCCEEEECEEEEECCCEEEEEECCCCCCCCCEEEEE
NLLYTFR
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA