| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175834
Identifier: 126175834
GI number: 126175834
Start: 4261464
End: 4263662
Strand: Direct
Name: 126175834
Synonym: Sbal_3639
Alternate gene names: NA
Gene position: 4261464-4263662 (Clockwise)
Preceding gene: 126175831
Following gene: 126175839
Centisome position: 83.11
GC content: 46.79
Gene sequence:
>2199_bases ATGCGTATTGCATTGGTTGCGGCCTTAGTAATGACATCCGGCATAGCAACTGCCGACGAAGGACAATGGCAACCTTATCA AATGCCTTCTATTGCAGACAAACTCAGTGAACGCGGAATCGATATTCCTGCAGAAAAACTGGCCGATCTTACAAGTTATC CAATGAACGCCGTTGTAGGGCTGGGCTATTGTACCGCCAGTTTTGTCTCCCCCCAAGGGCTAGTTGTGACAAACCACCAT TGTGCCTTCAAGGCGATACAATATAACACTAAGAAAGAACATAACTATCTCGAACAAGGCTTTTTAGCGACATCAATGGA CAAGGAACCCACTGCCGGTCCTAACGAACGTTTATACATCACAGAGGCAGTAACCGATGTCACCGCCCAAATCAATCAAG GCCTAAGCCAAGACCCGCTGAGCCGTTACGAAGACATTCAAAATCACAGCAAAGAACTGATCAAGAGCTGTGAAGCCGAT GCGAATTATCGCTGTAATGTCCGCAGTTTCCATAACGGCCTAGAATACTACCTAATCAAGCAATTGATGATCCGCGATGT ACGCTTAGTGTATGCACCTCCGGAAAGTGTCGGTGCCTACGGCGGCGACATCGATAACTATGAATATCCACGCCACTCGG GTGATTTTGCCTTCTTACGGGCTTATGTAGGTAAAGACGGCCAACCCGCTGCCTATAGCGACGATAACATCCCTTACAAG CCAAAGAGTTACCTTAAAATAAACGCCGATGGCGTGAAAGCCGGTGACGGCGTGTTCGTCGCAGGCTATCCGGGCTCAAC CAGTCGCTATAACCTCACTAGTGAACTTAAGTTTGCCAGTGACTGGCTGTATCCCACCCAAGCTAAACGCTATCAATTAC AGATTGATACTATCGAAGCTATGGGACAAAAAGATGCAGACATCGCCATTAAATACGCTGGTAATATGGCTTCAATGGCC AACCGAATGAAAAAACTCAACGGCCTGTTAGCGGGTTTTAAAGCCACGGATATCGTGGGTATTAAACAAAGCCGTGAGGA TAACTTTTTAGCTTGGCTTAAACAAAATCCTAAGCTAAATCAAAACCTCATCGCTGAGTTAGAAGTGCTACTTGCCGAGC AACAACAGGCGTTCCAAAGTAATTACTACTTTACTAATGCCCAATCGAGCACCCTGTTAACCGCAGCAAACAGCTTGTAT CGTCTTGCGAAAGAAAAACAAAAGCCCGATGCCGAACGTGAACAAGGCTATCAAGAGCGTGATTTAGCGATGCTGAGCTC GCGCCTTAAACGTATCGATTCGAGTTTCGATGTCAAAGTCGATAAGACATTGTGGTTACAGGATTTAAATGCTTACCTAG GTCAATCGAATCGCGTGGCAGCGCTCGATAAAATGTTAAGTGTAAACAGTAAAGACGTAGATCTGGCGGCTAAGCTCGAT GGTTTGTATTCACTCACTACGCTCACAGACCAAGCCCAACGTCTGGCGTGGATGAATGCCGATGTTAACGCCTTCGAAAC CAGTGCCGATCCCTTTATTCGTTTAGCCGTAGCACTTTACGACACCAATATGGCGCAGGAAAAAACGGAAAAAATCTTAG ACGGCAAGTTATCCACTGCTCGCCCAGACTATATGGCCGCAGTGATCGAATACTATAAAGCCAACAACTGGCCAGTCTAC CCTGACGCCAACGGTACTCTGCGTATCAGCTACGGTATGGTCGATGGTTATCAATCACGTGATGCACTCTACAAACAGCC GTTTACTCGTCTGGATGGCATAGTCGCGAAACACACAGGCGTAGAGCCCTACAATGCACCGAAAAAGCTCCTCGATGCGA TTAACGAGCAGCGTTTTGGCAATCATTTAGTGAAGTCGGTGTATCAAGATCCCCGCGGCTGGATTTGCAAACTCTTTTCT TGCTTAGACAAACCCGAAGAATTTAACTCAGTGCCAGTTAATTTCTTATCGAGCGTGGACACCACAGGCGGTAACTCCGG CTCACCAGTCTTCAACGGTAAAGGTGAGTTAGTGGGTCTTAACTTCGACTCCACCTATGAGGCCATTACTAAAGATTGGT TCTTCAACCCAACCATCACCCGCGCAGTACACGTGGATATCCGCTATATCCTGTGGATGATGGACGAAGTCGACCATGCC GAGAACATAATCCAAGAACTGGATTTAGTCAGAAATTAA
Upstream 100 bases:
>100_bases AACAAAATATGATATAAAACCCGCGTCAAGCAAACAGGATGTTTACACTCGCCTGTTATCTCATTCCAACGGACACTCTA ATAATCAATAAGGAAAGAAC
Downstream 100 bases:
>100_bases TACTTTGAGCTAAATCCGCTGCTCTAAACAAAAAGCCGCTCGCTGTTCTGCAGTAAGCGGCTTTTATTTGGGCTCGTATT TTAGCAGTGAATGCACTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 732; Mature: 732
Protein sequence:
>732_residues MRIALVAALVMTSGIATADEGQWQPYQMPSIADKLSERGIDIPAEKLADLTSYPMNAVVGLGYCTASFVSPQGLVVTNHH CAFKAIQYNTKKEHNYLEQGFLATSMDKEPTAGPNERLYITEAVTDVTAQINQGLSQDPLSRYEDIQNHSKELIKSCEAD ANYRCNVRSFHNGLEYYLIKQLMIRDVRLVYAPPESVGAYGGDIDNYEYPRHSGDFAFLRAYVGKDGQPAAYSDDNIPYK PKSYLKINADGVKAGDGVFVAGYPGSTSRYNLTSELKFASDWLYPTQAKRYQLQIDTIEAMGQKDADIAIKYAGNMASMA NRMKKLNGLLAGFKATDIVGIKQSREDNFLAWLKQNPKLNQNLIAELEVLLAEQQQAFQSNYYFTNAQSSTLLTAANSLY RLAKEKQKPDAEREQGYQERDLAMLSSRLKRIDSSFDVKVDKTLWLQDLNAYLGQSNRVAALDKMLSVNSKDVDLAAKLD GLYSLTTLTDQAQRLAWMNADVNAFETSADPFIRLAVALYDTNMAQEKTEKILDGKLSTARPDYMAAVIEYYKANNWPVY PDANGTLRISYGMVDGYQSRDALYKQPFTRLDGIVAKHTGVEPYNAPKKLLDAINEQRFGNHLVKSVYQDPRGWICKLFS CLDKPEEFNSVPVNFLSSVDTTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRYILWMMDEVDHA ENIIQELDLVRN
Sequences:
>Translated_732_residues MRIALVAALVMTSGIATADEGQWQPYQMPSIADKLSERGIDIPAEKLADLTSYPMNAVVGLGYCTASFVSPQGLVVTNHH CAFKAIQYNTKKEHNYLEQGFLATSMDKEPTAGPNERLYITEAVTDVTAQINQGLSQDPLSRYEDIQNHSKELIKSCEAD ANYRCNVRSFHNGLEYYLIKQLMIRDVRLVYAPPESVGAYGGDIDNYEYPRHSGDFAFLRAYVGKDGQPAAYSDDNIPYK PKSYLKINADGVKAGDGVFVAGYPGSTSRYNLTSELKFASDWLYPTQAKRYQLQIDTIEAMGQKDADIAIKYAGNMASMA NRMKKLNGLLAGFKATDIVGIKQSREDNFLAWLKQNPKLNQNLIAELEVLLAEQQQAFQSNYYFTNAQSSTLLTAANSLY RLAKEKQKPDAEREQGYQERDLAMLSSRLKRIDSSFDVKVDKTLWLQDLNAYLGQSNRVAALDKMLSVNSKDVDLAAKLD GLYSLTTLTDQAQRLAWMNADVNAFETSADPFIRLAVALYDTNMAQEKTEKILDGKLSTARPDYMAAVIEYYKANNWPVY PDANGTLRISYGMVDGYQSRDALYKQPFTRLDGIVAKHTGVEPYNAPKKLLDAINEQRFGNHLVKSVYQDPRGWICKLFS CLDKPEEFNSVPVNFLSSVDTTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRYILWMMDEVDHA ENIIQELDLVRN >Mature_732_residues MRIALVAALVMTSGIATADEGQWQPYQMPSIADKLSERGIDIPAEKLADLTSYPMNAVVGLGYCTASFVSPQGLVVTNHH CAFKAIQYNTKKEHNYLEQGFLATSMDKEPTAGPNERLYITEAVTDVTAQINQGLSQDPLSRYEDIQNHSKELIKSCEAD ANYRCNVRSFHNGLEYYLIKQLMIRDVRLVYAPPESVGAYGGDIDNYEYPRHSGDFAFLRAYVGKDGQPAAYSDDNIPYK PKSYLKINADGVKAGDGVFVAGYPGSTSRYNLTSELKFASDWLYPTQAKRYQLQIDTIEAMGQKDADIAIKYAGNMASMA NRMKKLNGLLAGFKATDIVGIKQSREDNFLAWLKQNPKLNQNLIAELEVLLAEQQQAFQSNYYFTNAQSSTLLTAANSLY RLAKEKQKPDAEREQGYQERDLAMLSSRLKRIDSSFDVKVDKTLWLQDLNAYLGQSNRVAALDKMLSVNSKDVDLAAKLD GLYSLTTLTDQAQRLAWMNADVNAFETSADPFIRLAVALYDTNMAQEKTEKILDGKLSTARPDYMAAVIEYYKANNWPVY PDANGTLRISYGMVDGYQSRDALYKQPFTRLDGIVAKHTGVEPYNAPKKLLDAINEQRFGNHLVKSVYQDPRGWICKLFS CLDKPEEFNSVPVNFLSSVDTTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRYILWMMDEVDHA ENIIQELDLVRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82048; Mature: 82048
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00673 V8_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALVAALVMTSGIATADEGQWQPYQMPSIADKLSERGIDIPAEKLADLTSYPMNAVVG CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH LGYCTASFVSPQGLVVTNHHCAFKAIQYNTKKEHNYLEQGFLATSMDKEPTAGPNERLYI HHHHHHHHCCCCCEEEECCCCEEEEEECCCCHHHHHHHHCCEEECCCCCCCCCCCCEEEE TEAVTDVTAQINQGLSQDPLSRYEDIQNHSKELIKSCEADANYRCNVRSFHNGLEYYLIK EHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHCCHHHHHHH QLMIRDVRLVYAPPESVGAYGGDIDNYEYPRHSGDFAFLRAYVGKDGQPAAYSDDNIPYK HHHHHCCEEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC PKSYLKINADGVKAGDGVFVAGYPGSTSRYNLTSELKFASDWLYPTQAKRYQLQIDTIEA CCCEEEEECCCEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHH MGQKDADIAIKYAGNMASMANRMKKLNGLLAGFKATDIVGIKQSREDNFLAWLKQNPKLN CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCEEEEECCCCCCC QNLIAELEVLLAEQQQAFQSNYYFTNAQSSTLLTAANSLYRLAKEKQKPDAEREQGYQER HHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCHHH DLAMLSSRLKRIDSSFDVKVDKTLWLQDLNAYLGQSNRVAALDKMLSVNSKDVDLAAKLD HHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHC GLYSLTTLTDQAQRLAWMNADVNAFETSADPFIRLAVALYDTNMAQEKTEKILDGKLSTA CHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHEEEHHHHCCCHHHHHHHHHHCCCCCCC RPDYMAAVIEYYKANNWPVYPDANGTLRISYGMVDGYQSRDALYKQPFTRLDGIVAKHTG CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHCHHHHCCC VEPYNAPKKLLDAINEQRFGNHLVKSVYQDPRGWICKLFSCLDKPEEFNSVPVNFLSSVD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCHHHHHHCC TTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRYILWMMDEVDHA CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH ENIIQELDLVRN HHHHHHHHHHCC >Mature Secondary Structure MRIALVAALVMTSGIATADEGQWQPYQMPSIADKLSERGIDIPAEKLADLTSYPMNAVVG CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHH LGYCTASFVSPQGLVVTNHHCAFKAIQYNTKKEHNYLEQGFLATSMDKEPTAGPNERLYI HHHHHHHHCCCCCEEEECCCCEEEEEECCCCHHHHHHHHCCEEECCCCCCCCCCCCEEEE TEAVTDVTAQINQGLSQDPLSRYEDIQNHSKELIKSCEADANYRCNVRSFHNGLEYYLIK EHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHCCHHHHHHH QLMIRDVRLVYAPPESVGAYGGDIDNYEYPRHSGDFAFLRAYVGKDGQPAAYSDDNIPYK HHHHHCCEEEECCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC PKSYLKINADGVKAGDGVFVAGYPGSTSRYNLTSELKFASDWLYPTQAKRYQLQIDTIEA CCCEEEEECCCEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEHHHH MGQKDADIAIKYAGNMASMANRMKKLNGLLAGFKATDIVGIKQSREDNFLAWLKQNPKLN CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCCEEEEECCCCCCC QNLIAELEVLLAEQQQAFQSNYYFTNAQSSTLLTAANSLYRLAKEKQKPDAEREQGYQER HHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCHHH DLAMLSSRLKRIDSSFDVKVDKTLWLQDLNAYLGQSNRVAALDKMLSVNSKDVDLAAKLD HHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHC GLYSLTTLTDQAQRLAWMNADVNAFETSADPFIRLAVALYDTNMAQEKTEKILDGKLSTA CHHHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHEEEHHHHCCCHHHHHHHHHHCCCCCCC RPDYMAAVIEYYKANNWPVYPDANGTLRISYGMVDGYQSRDALYKQPFTRLDGIVAKHTG CHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHCHHHHCCC VEPYNAPKKLLDAINEQRFGNHLVKSVYQDPRGWICKLFSCLDKPEEFNSVPVNFLSSVD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHCCCCCHHHHHHCC TTGGNSGSPVFNGKGELVGLNFDSTYEAITKDWFFNPTITRAVHVDIRYILWMMDEVDHA CCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHH ENIIQELDLVRN HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA