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The map label for this gene is bfrD [H]

Identifier: 126175830

GI number: 126175830

Start: 4254727

End: 4256919

Strand: Reverse

Name: bfrD [H]

Synonym: Sbal_3635

Alternate gene names: 126175830

Gene position: 4256919-4254727 (Counterclockwise)

Preceding gene: 126175832

Following gene: 126175829

Centisome position: 83.02

GC content: 46.42

Gene sequence:

>2193_bases
ATGAAATTTGCAAAACGCCGCAATGGCCGAGTCGCACTCGGCGCCCATGTTTTAGGTTCATTAACTATAGGTATGGCTGT
ATCAGCTACCCCTGCGATAGCAGCGGAGCAGGCACAAGTCGCTGGTAAGAAAGTCGAACATATTGAGGTTAACGGCGAAT
ATTTGGGTTACAACACGCGCAAAGTACAGTCTGGTAAATTTACTGATGATCTGCTCAATAGCGCTAAAACGGTCACTGTG
ATTAATCAAGATCTGATCAAAGACATGGGGGCACAAAGTTTTACTGATGCTCTGCGTGCAACACCTGGTATTACGCTTGG
TACGGGTGAAGGTGGTAATCCCTATGGTGACAGGCCGTTTATTCGTGGTTATGACGCTCAATCTTCAACGTTTATTAACG
GTATACGGGATGTGGGCTCCCAGAGCCGTGAGACTTTTAATATCGAACAAATTGAGGTGCTAAAGGGGCCGAGTTCTGTT
TATAACGGCCGTGGTGCAGTTGGCGGTAGTATCAATATCGTGACTAAAAAAGCCCAAGCCGAAGATTTTATTAATGCGGA
TGTGGCGATTGGTACTGATGCTTTAAAACGCGCCAGCCTTGACGTTAACCATGTAATTGCAGATGAAGCTGCTGTGCGGG
TGAATCTAATGGCGCACGATGCCAATACGCCGGGTCGTGATGAAGTCTCTGGTAATCGCTGGGGCATTGCACCCTCGGTG
ACCTTTGGCTTGACGACACCCACTAAGGTGACGTTGGAATACTATCATTTTGAAAACCATGACATACCTGACTATGGGAT
CCCCTATGATCAAGCGACAGGTAGGCCTGCCGATGTTGATCCCAATAACTTCTATGGCTTATTGTCGCGGGATTTTCGCG
ATAATAATGACGACACAGCTTCAGTGCTGATAAGCCATGACTTTAACAATGACATGCAATTTACGTCGACCTCAGTGTAT
AGCCGTAATACCAATTATTACATTGTGACTAACCCCGATGACACGACAGGCAACGTCGCCAATGGTTATGTATGGCGTAA
CACTAAATCGCGTCATTCAGTCACTAAAACACTCGCGACCCAATTACAACTGGCGGGTGAGGCCAAGCTGGCCGGATTCA
CCAACCGTTTTGCGATTGGCACTGAATTTAGCAACGAGCGCACCAGTAACTTAAGTTATACGGTCGATACGGGTAATGGT
CGTAATGCGGGTTGTAATGATGCACTACTGGCTAATTACAATTGTACTTTGCTATCGAAGCCTAATCCTCACGCCCCTTG
GGTCGGCAGCGTGACGCTAGGGACAGATGCCACTGTGACTGAAACGGACACTCGCTCAGTTTATGCCTTTAATACCATAG
AGTTGAATGAGTCTTGGATGATTAACGGCGGCGTGCGCTGGGATGATTACAGCACTGCTGCACAGAACTCGACTTCGTCA
CTATCCAACGACGATGACTTTTTAAACTACCAATTATCAATGCTGTACAAACCTGCGGTCAACGGCAGTATCTATGCGGC
GTGGGGCACATCCTCGAATCCGCCAGGAACATCTAATGGCGATGGTTCAGATCGTCTTGGTAGTAACAATGAAGATTTAA
AGCCTGAAGATACTGAAAGTTACGAGCTAGGTACTAAGTGGGATTTCTTCAGTGGCCGCTTATCGCTTAATGGTTCAGTA
TTCCAAATCGAGAAGAACAACGCTCGCGTTGCGACTTCTGCCGATCGCAATTCACCGCAAGAAAATGTCGGTGAGCAGAA
AGTGAAGGGCTTTGAAATTGGTTTTTCAGGTGATATTACTGAGCATTGGCATGGATTTGGTGGATACACCTATCTTGATG
CTAGCCTAGAAAGTAACGGATTTAATGCCGCTTATGATGGCAATCGTTTCCCTAATACGGCCAAAAACAGCATAAGCCTG
TTTACCACTTACGACATCACGGAACAGTTAAATGTCGGAACTGGTGCGTATTACATGGGGCAGGTTTACGGTAATACCGC
CAATACCTTATCGATTCCTTCATACTGGCGTTTTGATGTGGTTTCATCTTACAAGATGAATGACTTTCTGACGCTGCGCT
TGAATGTGCAAAACCTCACTGACGAGCGTTATTACGATAAAGCCTACACTGCGCATTTTGCTAACATGGCGCCCGGACGT
TTGATCATGCTCAGTGCCGATATGCATTTTTAA

Upstream 100 bases:

>100_bases
ATAGTTATTGATCAGTTTGTGCGATTTCCTTATATTAGCGGGCGATTAACAGGTGGGGGACATCTGTTACAGGGTTTAGT
CCGCAACAGGAATGCTTTTA

Downstream 100 bases:

>100_bases
TGTCAGTCATTAGCTAATGTGAGGGCAGCCCTCGGGCTGCCTTTTATGTTTTATAAACGGTATTACTCATGCCGTATTTT
TTGCCCTATGGAACCCAGAG

Product: TonB-dependent siderophore receptor

Products: NA

Alternate protein names: Virulence-associated outer membrane protein Vir-90 [H]

Number of amino acids: Translated: 730; Mature: 730

Protein sequence:

>730_residues
MKFAKRRNGRVALGAHVLGSLTIGMAVSATPAIAAEQAQVAGKKVEHIEVNGEYLGYNTRKVQSGKFTDDLLNSAKTVTV
INQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPFIRGYDAQSSTFINGIRDVGSQSRETFNIEQIEVLKGPSSV
YNGRGAVGGSINIVTKKAQAEDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
TFGLTTPTKVTLEYYHFENHDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTASVLISHDFNNDMQFTSTSVY
SRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLATQLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNG
RNAGCNDALLANYNCTLLSKPNPHAPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAAQNSTSS
LSNDDDFLNYQLSMLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTESYELGTKWDFFSGRLSLNGSV
FQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDITEHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISL
FTTYDITEQLNVGTGAYYMGQVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
LIMLSADMHF

Sequences:

>Translated_730_residues
MKFAKRRNGRVALGAHVLGSLTIGMAVSATPAIAAEQAQVAGKKVEHIEVNGEYLGYNTRKVQSGKFTDDLLNSAKTVTV
INQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPFIRGYDAQSSTFINGIRDVGSQSRETFNIEQIEVLKGPSSV
YNGRGAVGGSINIVTKKAQAEDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
TFGLTTPTKVTLEYYHFENHDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTASVLISHDFNNDMQFTSTSVY
SRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLATQLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNG
RNAGCNDALLANYNCTLLSKPNPHAPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAAQNSTSS
LSNDDDFLNYQLSMLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTESYELGTKWDFFSGRLSLNGSV
FQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDITEHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISL
FTTYDITEQLNVGTGAYYMGQVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
LIMLSADMHF
>Mature_730_residues
MKFAKRRNGRVALGAHVLGSLTIGMAVSATPAIAAEQAQVAGKKVEHIEVNGEYLGYNTRKVQSGKFTDDLLNSAKTVTV
INQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPFIRGYDAQSSTFINGIRDVGSQSRETFNIEQIEVLKGPSSV
YNGRGAVGGSINIVTKKAQAEDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
TFGLTTPTKVTLEYYHFENHDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTASVLISHDFNNDMQFTSTSVY
SRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLATQLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNG
RNAGCNDALLANYNCTLLSKPNPHAPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAAQNSTSS
LSNDDDFLNYQLSMLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTESYELGTKWDFFSGRLSLNGSV
FQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDITEHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISL
FTTYDITEQLNVGTGAYYMGQVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
LIMLSADMHF

Specific function: Probably involved in iron transport [H]

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787024, Length=783, Percent_Identity=32.183908045977, Blast_Score=334, Evalue=1e-92,
Organism=Escherichia coli, GI1786344, Length=764, Percent_Identity=21.7277486910995, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1787344, Length=677, Percent_Identity=22.3042836041359, Blast_Score=80, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 79757; Mature: 79757

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAKRRNGRVALGAHVLGSLTIGMAVSATPAIAAEQAQVAGKKVEHIEVNGEYLGYNTR
CCCCCCCCCCEEEEHHHHHHEEECEEEECCCCHHHHHHHHCCCEEEEEEECCEEECCCCE
KVQSGKFTDDLLNSAKTVTVINQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPF
EECCCCCHHHHHCCCEEEEEECHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCE
IRGYDAQSSTFINGIRDVGSQSRETFNIEQIEVLKGPSSVYNGRGAVGGSINIVTKKAQA
EECCCCCCHHHHHHHHHHCCCCCCEECCEEEEEECCCHHHCCCCCCCCCEEEEEEECCHH
EDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
HHHCCCCEEECHHHHHHCCCCHHEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCE
TFGLTTPTKVTLEYYHFENHDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTA
EEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEE
SVLISHDFNNDMQFTSTSVYSRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLAT
EEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHH
QLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNGRNAGCNDALLANYNCTLLSK
HHHHCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCEEEECC
PNPHAPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAAQNSTSS
CCCCCCEEEEEEECCCCEEEECCCCEEEEEEEEEECCCEEEECCEEECCCCHHHCCCCCC
LSNDDDFLNYQLSMLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTES
CCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YELGTKWDFFSGRLSLNGSVFQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDIT
EECCCEEEEECCEEEECCCEEEEECCCCEEEECCCCCCCHHHHCHHHCCEEEECCCCCCH
EHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISLFTTYDITEQLNVGTGAYYMG
HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCEEEEE
QVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
EEECCCCCEEECCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCE
LIMLSADMHF
EEEEECCCCC
>Mature Secondary Structure
MKFAKRRNGRVALGAHVLGSLTIGMAVSATPAIAAEQAQVAGKKVEHIEVNGEYLGYNTR
CCCCCCCCCCEEEEHHHHHHEEECEEEECCCCHHHHHHHHCCCEEEEEEECCEEECCCCE
KVQSGKFTDDLLNSAKTVTVINQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGDRPF
EECCCCCHHHHHCCCEEEEEECHHHHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCE
IRGYDAQSSTFINGIRDVGSQSRETFNIEQIEVLKGPSSVYNGRGAVGGSINIVTKKAQA
EECCCCCCHHHHHHHHHHCCCCCCEECCEEEEEECCCHHHCCCCCCCCCEEEEEEECCHH
EDFINADVAIGTDALKRASLDVNHVIADEAAVRVNLMAHDANTPGRDEVSGNRWGIAPSV
HHHCCCCEEECHHHHHHCCCCHHEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCE
TFGLTTPTKVTLEYYHFENHDIPDYGIPYDQATGRPADVDPNNFYGLLSRDFRDNNDDTA
EEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEE
SVLISHDFNNDMQFTSTSVYSRNTNYYIVTNPDDTTGNVANGYVWRNTKSRHSVTKTLAT
EEEEEECCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHH
QLQLAGEAKLAGFTNRFAIGTEFSNERTSNLSYTVDTGNGRNAGCNDALLANYNCTLLSK
HHHHCCCEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCEEEECC
PNPHAPWVGSVTLGTDATVTETDTRSVYAFNTIELNESWMINGGVRWDDYSTAAQNSTSS
CCCCCCEEEEEEECCCCEEEECCCCEEEEEEEEEECCCEEEECCEEECCCCHHHCCCCCC
LSNDDDFLNYQLSMLYKPAVNGSIYAAWGTSSNPPGTSNGDGSDRLGSNNEDLKPEDTES
CCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YELGTKWDFFSGRLSLNGSVFQIEKNNARVATSADRNSPQENVGEQKVKGFEIGFSGDIT
EECCCEEEEECCEEEECCCEEEEECCCCEEEECCCCCCCHHHHCHHHCCEEEECCCCCCH
EHWHGFGGYTYLDASLESNGFNAAYDGNRFPNTAKNSISLFTTYDITEQLNVGTGAYYMG
HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCEEEEE
QVYGNTANTLSIPSYWRFDVVSSYKMNDFLTLRLNVQNLTDERYYDKAYTAHFANMAPGR
EEECCCCCEEECCCEEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCE
LIMLSADMHF
EEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12910271; 10079522 [H]