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The map label for this gene is arrD [H]

Identifier: 126175800

GI number: 126175800

Start: 4232836

End: 4233369

Strand: Reverse

Name: arrD [H]

Synonym: Sbal_3605

Alternate gene names: 126175800

Gene position: 4233369-4232836 (Counterclockwise)

Preceding gene: 126175801

Following gene: 126175799

Centisome position: 82.56

GC content: 51.5

Gene sequence:

>534_bases
ATGTCATTAAAGCAAAAGCTCGTGGCACTGGGGCTTTCTTCTGCTGTCGCACTGGCGGGGGCTAATTTGATTGCCCCCGC
TGAAGCGCCGAACGGCGAGCCCGTTCTGCACACCTATCTTGATCCGGTGGAAGTTATCACAGCTTGCTTAGGGCACACTG
GGCCCGAGCTTGAGATCAACCAGTTTTTTAGCGAGCAGCAATGCATTGAAATGTTCGCCAAGGATTTAGGTAAAGCCGAT
CGGCAGCTGCGGCGGCTAACGTATCCGGTGCAACTTACCGAAGGTGAGCACGCTGCTTATCTCAGTCTGATTTATAACTT
TGGTGCGGGTAACTTTCAAACCTCCACCTTGCGCAAGCTGTTACTGCGCGGCGAACGGGTGGCCGCTTGTCACCAGCTCA
CCGATGCATGCGGTAAACACGGCTGTACTGGTTTTGTCTATGCCGCTGACATCAAGCTGCCTGGCTTAGTCGAACGCCGC
AAAGAAGAACGTAAAATCTGCTTAAAGGATTTATATGTGGAACAAAATCATTAA

Upstream 100 bases:

>100_bases
AAAGACACTAAAAACATCAGCTGTTAGAGGCGGCTTACCTCACCGTTGATCTAACCGTTGGCCGCGCTAAGGCTAACCTC
ATTTTAAAGGAGACTGATCT

Downstream 100 bases:

>100_bases
TGCCACGGGCTCGCTGCACCTGTATTTAATCGCAGCGCTCATCATAGTGATAACGCTACTTGGCCTTAGCCTTACCGCCG
TTAAAGCTGATCTCGCGTTA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSLKQKLVALGLSSAVALAGANLIAPAEAPNGEPVLHTYLDPVEVITACLGHTGPELEINQFFSEQQCIEMFAKDLGKAD
RQLRRLTYPVQLTEGEHAAYLSLIYNFGAGNFQTSTLRKLLLRGERVAACHQLTDACGKHGCTGFVYAADIKLPGLVERR
KEERKICLKDLYVEQNH

Sequences:

>Translated_177_residues
MSLKQKLVALGLSSAVALAGANLIAPAEAPNGEPVLHTYLDPVEVITACLGHTGPELEINQFFSEQQCIEMFAKDLGKAD
RQLRRLTYPVQLTEGEHAAYLSLIYNFGAGNFQTSTLRKLLLRGERVAACHQLTDACGKHGCTGFVYAADIKLPGLVERR
KEERKICLKDLYVEQNH
>Mature_176_residues
SLKQKLVALGLSSAVALAGANLIAPAEAPNGEPVLHTYLDPVEVITACLGHTGPELEINQFFSEQQCIEMFAKDLGKADR
QLRRLTYPVQLTEGEHAAYLSLIYNFGAGNFQTSTLRKLLLRGERVAACHQLTDACGKHGCTGFVYAADIKLPGLVERRK
EERKICLKDLYVEQNH

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=130, Percent_Identity=35.3846153846154, Blast_Score=83, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 19482; Mature: 19350

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKQKLVALGLSSAVALAGANLIAPAEAPNGEPVLHTYLDPVEVITACLGHTGPELEIN
CCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCHHH
QFFSEQQCIEMFAKDLGKADRQLRRLTYPVQLTEGEHAAYLSLIYNFGAGNFQTSTLRKL
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHH
LLRGERVAACHQLTDACGKHGCTGFVYAADIKLPGLVERRKEERKICLKDLYVEQNH
HHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLKQKLVALGLSSAVALAGANLIAPAEAPNGEPVLHTYLDPVEVITACLGHTGPELEIN
CHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHCCHHHHHHHHHCCCCCCCHHH
QFFSEQQCIEMFAKDLGKADRQLRRLTYPVQLTEGEHAAYLSLIYNFGAGNFQTSTLRKL
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHH
LLRGERVAACHQLTDACGKHGCTGFVYAADIKLPGLVERRKEERKICLKDLYVEQNH
HHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]