| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175801
Identifier: 126175801
GI number: 126175801
Start: 4233845
End: 4234492
Strand: Reverse
Name: 126175801
Synonym: Sbal_3606
Alternate gene names: NA
Gene position: 4234492-4233845 (Counterclockwise)
Preceding gene: 126175802
Following gene: 126175800
Centisome position: 82.59
GC content: 33.49
Gene sequence:
>648_bases ATGCCAAGTGTTGCGACAACAGAGGCCATTACTTGGCCAAGTTTAGCGATTATAACCGCTACTTTTACGGTATTGATCGG TTTTATTAAGTTGATGTTTGACTTTCATTTTGAGAAGAACAAGTTTCGTCATAAAAATATTGAAATAGTTCAGTCTACTT TGAGTGGCAATCTACATAAACCAAGCTTAAAGCAACGGTACCTTACTGAGCAGGTTTTTAGTTTGATGTACCGATTCAGA CTCACATATGACGAGATCAACGTTTTGCTAAGGTATTCAAATCCAAGTCGTGCATTCGAACTGTTTGTAAAAGGGAATGA GTATCTAAATTTATCTAATAAGTTGAATTCAATAGTTTTAAAAAAAAACTACATGAAAAAATCAATAGGAAATCTGATTT TTTTTCCAAGGGACATAATTTTCTTCATTGTGTATGGAATTTGGGGATTTTTAGGAACCTTTAGCTTTGCTATTGCAATT TACGTGAGTGAAACAGATAGTTGGTATTCTGTGCCTAAAATTCTTGAACAGTTTGAAATGATTGGAATTATTTGGTTTTT TTATGCATATTTATCGGGTGTGTATTTTGGATATTTGCAGGGAAATCAATTAATCGGATCGGAAATATTAGAGCCGCTTT CACACTAG
Upstream 100 bases:
>100_bases TTGTTTGTAATGCATGTGCTGTTATTAGCAGATCGACAGGGATCTAATATACCAACTTTTGATCCTATAAGTGCGTAGAA CAAACATACAGAGGTTTTGA
Downstream 100 bases:
>100_bases TGGAGATGGGTGATAAATCACTTAAGCGATAAGTAAAACAATAAATCCTCTGTGATTAAGTTTTCACGTATCACATATTT ACAAATTCCGAAACGACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPSVATTEAITWPSLAIITATFTVLIGFIKLMFDFHFEKNKFRHKNIEIVQSTLSGNLHKPSLKQRYLTEQVFSLMYRFR LTYDEINVLLRYSNPSRAFELFVKGNEYLNLSNKLNSIVLKKNYMKKSIGNLIFFPRDIIFFIVYGIWGFLGTFSFAIAI YVSETDSWYSVPKILEQFEMIGIIWFFYAYLSGVYFGYLQGNQLIGSEILEPLSH
Sequences:
>Translated_215_residues MPSVATTEAITWPSLAIITATFTVLIGFIKLMFDFHFEKNKFRHKNIEIVQSTLSGNLHKPSLKQRYLTEQVFSLMYRFR LTYDEINVLLRYSNPSRAFELFVKGNEYLNLSNKLNSIVLKKNYMKKSIGNLIFFPRDIIFFIVYGIWGFLGTFSFAIAI YVSETDSWYSVPKILEQFEMIGIIWFFYAYLSGVYFGYLQGNQLIGSEILEPLSH >Mature_214_residues PSVATTEAITWPSLAIITATFTVLIGFIKLMFDFHFEKNKFRHKNIEIVQSTLSGNLHKPSLKQRYLTEQVFSLMYRFRL TYDEINVLLRYSNPSRAFELFVKGNEYLNLSNKLNSIVLKKNYMKKSIGNLIFFPRDIIFFIVYGIWGFLGTFSFAIAIY VSETDSWYSVPKILEQFEMIGIIWFFYAYLSGVYFGYLQGNQLIGSEILEPLSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25109; Mature: 24977
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVATTEAITWPSLAIITATFTVLIGFIKLMFDFHFEKNKFRHKNIEIVQSTLSGNLHK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHCCCCCC PSLKQRYLTEQVFSLMYRFRLTYDEINVLLRYSNPSRAFELFVKGNEYLNLSNKLNSIVL CHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCEEEEEECCCCEEEHHHHHHHHHH KKNYMKKSIGNLIFFPRDIIFFIVYGIWGFLGTFSFAIAIYVSETDSWYSVPKILEQFEM HHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH IGIIWFFYAYLSGVYFGYLQGNQLIGSEILEPLSH HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCC >Mature Secondary Structure PSVATTEAITWPSLAIITATFTVLIGFIKLMFDFHFEKNKFRHKNIEIVQSTLSGNLHK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHCCCCCC PSLKQRYLTEQVFSLMYRFRLTYDEINVLLRYSNPSRAFELFVKGNEYLNLSNKLNSIVL CHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCEEEEEECCCCEEEHHHHHHHHHH KKNYMKKSIGNLIFFPRDIIFFIVYGIWGFLGTFSFAIAIYVSETDSWYSVPKILEQFEM HHHHHHHHHCCEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHH IGIIWFFYAYLSGVYFGYLQGNQLIGSEILEPLSH HHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA