| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175783
Identifier: 126175783
GI number: 126175783
Start: 4212840
End: 4214600
Strand: Reverse
Name: 126175783
Synonym: Sbal_3588
Alternate gene names: NA
Gene position: 4214600-4212840 (Counterclockwise)
Preceding gene: 126175784
Following gene: 126175782
Centisome position: 82.2
GC content: 49.18
Gene sequence:
>1761_bases ATGACAGCAATAATTCTAAGGTTCGATACACCTTGGTTGAATGCAGTTAGCCCGATAACGCTCAGGTTTATCGATACCCC CGTAATTGTTGATAACAGCTTTGGTATTGAGTGCGGGTTCATCTGGTCAATGTTGAGCGATATCGAGCAGTCATTGATGC TTGCGGAGTTCGCCAGTGATATTGAATCAAAAATCGAGTCACCATGGCTAAACTACAACTCTAGTGAAGTTGTTATCAGT TCAGCATGGACTTCAAATGTAGCCAATGATTCGCTGTCGCAGATTCATTGGCTAAATAATGATGAAGTTCGAACTGACAG CAGCATTAATTGGTCGCTGCCAATCGATCATCAAGTCACATTAAGCGTTAACTGGGTTGTGCCCGATGAGCATCAAATAC AATCATCAATTAACTGGCTGGATATTGCTGCGCACCAGTTGCAGACTGCAGTCGTGTGGATAGACGGTCAAGACCAAGAA AGCCTATTGATTATTCAGTACCGTGGTTTTGTGGTCGATGATGAAAAGTCGATTAAATGGGGCTTCCACGAACCGCGCTG GGTATGTTCTACCAAGTATCGCCCACCCGTTGGCAAGGTCACACTTCGATTCAATGAACCATTATCTACACAACCAAACC CGATTGTTTTACGGTTCACGGCCTCACCGAACTATTGCTACTGGGACGATGGCGGCGGCCTCATCGATGCCAACCCACCA TTACCGAATATCGATTTTAAAATTCCGATTGAACCACAAATCCGTAGGTACTACTTAATGCAGCCAACGATCACATGCGT GCGAGTATCAGACAGTTTACCGATTGTGATCGTAAGTTGTAGCATTAGCCAAAGCCGTGGACAGTGGGCGAGGTCGGTTA GCCTTGAGTTCTCAAGCCGTATCGATGCGCAGCGTGCCCACAATGAGCTATTGCTGATCACCATTAACGGTTATGAGTTT TATGCCATTGCCGAGCAACCAAGCTCCAGCAAAGCCTTTGGGATTGAAACCCACAGCAGCACAGGCCGTTCACGCGCCGC TGAGCTGTCATCGTCTTATCGTTTGCCAATAAGTTACACCAACACTGTCTTGCGCAGCCTTGGCGGTATTATCGGTGATC TGTTGCAAAACACAGGCTGGACTGCAGAGCTAAGCGGGATACCAGATTTTAGCGTCCCTGCAGGCGCGTTCAGCGTGGGT AACAAGTCACCGATCGACGCGATTAATGAAGCAGCAAGCCAATTGGGCTGCATGATCTTAGCGGATGATGCCACCCGCAA ATTGACTATCATTCCCCGCTGGCCAACAGTGCCATGGGAAATGGCAACAGCGGTACCAGACCTAACAGTGCACGATGCCG TGATCACCAATTACAGCGAGTCAGTCTCCCGCAATCCATTGTGTGATGTGGTTTGGTTGCGGGGCGAACAACAGGGGATT AGCGCTAAGGTGAAACGCACCGGCAGCGCGGGCAATATTCCTGCTGCTGACATTAGCGCCCAGTTGATCGTAGATAACCA AGCGGCGCGCATCGCTGGCACCAATGCGCTGGCAGATACAGGCGACAAGCTGAATGTCACTCTATCCTTGCCCGTTATGG TTGATTTGCCACCCGCAACACCTGGCATGTTGATTGGTATCCGCGAAGGTGCCGAAGTCTTTAAAGGAACGTGTGACAGT TGGAGTATTCGCGCCAGCGTCAGTGATCGCGGTGATATCGATATCGAACAATCCATTACAGTGATCCGCTCAATCGCGTA A
Upstream 100 bases:
>100_bases CTAACGATACATTGTTGGTTGGCATATTAGATAACGACAGGGTATACAACTGTAAATTTGCAGATGGTGTACGGGCTGAA TCTGTCAATGTGAATGCAAT
Downstream 100 bases:
>100_bases CCCTGCTAACAGTCAGCGAGGCACCATGCTTAAACAACTTCAAACAGCGTTAGTATTGCCACGGATGATTATGACAGTAG CTGCCGTAAACGCCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MTAIILRFDTPWLNAVSPITLRFIDTPVIVDNSFGIECGFIWSMLSDIEQSLMLAEFASDIESKIESPWLNYNSSEVVIS SAWTSNVANDSLSQIHWLNNDEVRTDSSINWSLPIDHQVTLSVNWVVPDEHQIQSSINWLDIAAHQLQTAVVWIDGQDQE SLLIIQYRGFVVDDEKSIKWGFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNYCYWDDGGGLIDANPP LPNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVIVSCSISQSRGQWARSVSLEFSSRIDAQRAHNELLLITINGYEF YAIAEQPSSSKAFGIETHSSTGRSRAAELSSSYRLPISYTNTVLRSLGGIIGDLLQNTGWTAELSGIPDFSVPAGAFSVG NKSPIDAINEAASQLGCMILADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGI SAKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPATPGMLIGIREGAEVFKGTCDS WSIRASVSDRGDIDIEQSITVIRSIA
Sequences:
>Translated_586_residues MTAIILRFDTPWLNAVSPITLRFIDTPVIVDNSFGIECGFIWSMLSDIEQSLMLAEFASDIESKIESPWLNYNSSEVVIS SAWTSNVANDSLSQIHWLNNDEVRTDSSINWSLPIDHQVTLSVNWVVPDEHQIQSSINWLDIAAHQLQTAVVWIDGQDQE SLLIIQYRGFVVDDEKSIKWGFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNYCYWDDGGGLIDANPP LPNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVIVSCSISQSRGQWARSVSLEFSSRIDAQRAHNELLLITINGYEF YAIAEQPSSSKAFGIETHSSTGRSRAAELSSSYRLPISYTNTVLRSLGGIIGDLLQNTGWTAELSGIPDFSVPAGAFSVG NKSPIDAINEAASQLGCMILADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGI SAKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPATPGMLIGIREGAEVFKGTCDS WSIRASVSDRGDIDIEQSITVIRSIA >Mature_585_residues TAIILRFDTPWLNAVSPITLRFIDTPVIVDNSFGIECGFIWSMLSDIEQSLMLAEFASDIESKIESPWLNYNSSEVVISS AWTSNVANDSLSQIHWLNNDEVRTDSSINWSLPIDHQVTLSVNWVVPDEHQIQSSINWLDIAAHQLQTAVVWIDGQDQES LLIIQYRGFVVDDEKSIKWGFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNYCYWDDGGGLIDANPPL PNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVIVSCSISQSRGQWARSVSLEFSSRIDAQRAHNELLLITINGYEFY AIAEQPSSSKAFGIETHSSTGRSRAAELSSSYRLPISYTNTVLRSLGGIIGDLLQNTGWTAELSGIPDFSVPAGAFSVGN KSPIDAINEAASQLGCMILADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGIS AKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPATPGMLIGIREGAEVFKGTCDSW SIRASVSDRGDIDIEQSITVIRSIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64475; Mature: 64344
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIILRFDTPWLNAVSPITLRFIDTPVIVDNSFGIECGFIWSMLSDIEQSLMLAEFASD CEEEEEEECCCCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH IESKIESPWLNYNSSEVVISSAWTSNVANDSLSQIHWLNNDEVRTDSSINWSLPIDHQVT HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHEEECCCCCEECCCCEEEECCCCCEEE LSVNWVVPDEHQIQSSINWLDIAAHQLQTAVVWIDGQDQESLLIIQYRGFVVDDEKSIKW EEEEEEECCHHHHHHCCCEEEHHHHEEEEEEEEEECCCCCCEEEEEECCEEEECCCCEEE GFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNYCYWDDGGGLIDANPP CCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEECCCC LPNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVIVSCSISQSRGQWARSVSLEFSSR CCCCCEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEHHHC IDAQRAHNELLLITINGYEFYAIAEQPSSSKAFGIETHSSTGRSRAAELSSSYRLPISYT CCHHHCCCCEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHCCCEEEEEEHH NTVLRSLGGIIGDLLQNTGWTAELSGIPDFSVPAGAFSVGNKSPIDAINEAASQLGCMIL HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCEEEE ADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGI ECCCCCEEEEEECCCCCCHHHHHCCCCCEECHHHHHCCHHHHCCCCCEEEEEECCCCCCC SAKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPAT EEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCC PGMLIGIREGAEVFKGTCDSWSIRASVSDRGDIDIEQSITVIRSIA CCEEEEECCCHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TAIILRFDTPWLNAVSPITLRFIDTPVIVDNSFGIECGFIWSMLSDIEQSLMLAEFASD EEEEEEECCCCCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH IESKIESPWLNYNSSEVVISSAWTSNVANDSLSQIHWLNNDEVRTDSSINWSLPIDHQVT HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHEEECCCCCEECCCCEEEECCCCCEEE LSVNWVVPDEHQIQSSINWLDIAAHQLQTAVVWIDGQDQESLLIIQYRGFVVDDEKSIKW EEEEEEECCHHHHHHCCCEEEHHHHEEEEEEEEEECCCCCCEEEEEECCEEEECCCCEEE GFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNYCYWDDGGGLIDANPP CCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEECCCC LPNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVIVSCSISQSRGQWARSVSLEFSSR CCCCCEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEHHHC IDAQRAHNELLLITINGYEFYAIAEQPSSSKAFGIETHSSTGRSRAAELSSSYRLPISYT CCHHHCCCCEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCCHHHHHHCCCEEEEEEHH NTVLRSLGGIIGDLLQNTGWTAELSGIPDFSVPAGAFSVGNKSPIDAINEAASQLGCMIL HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCEEEE ADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGI ECCCCCEEEEEECCCCCCHHHHHCCCCCEECHHHHHCCHHHHCCCCCEEEEEECCCCCCC SAKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPAT EEEEEECCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCC PGMLIGIREGAEVFKGTCDSWSIRASVSDRGDIDIEQSITVIRSIA CCEEEEECCCHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA