| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175784
Identifier: 126175784
GI number: 126175784
Start: 4214877
End: 4215830
Strand: Reverse
Name: 126175784
Synonym: Sbal_3589
Alternate gene names: NA
Gene position: 4215830-4214877 (Counterclockwise)
Preceding gene: 126175785
Following gene: 126175783
Centisome position: 82.22
GC content: 43.4
Gene sequence:
>954_bases ATGGGATTACCAGTAACTATTTATCGTTATACAGACGCGGGTGCACCGCAATTAACTAACGGCACCCCATCCGAGTGGAT CGACATTTTAAAGAAAGTGTTAGTGGAGGGTTATGGCTCTAAAGCACCACTTGGCTGGACATTAGAATTTGAAAATGCTG GTGCATTTAAGGTTGCATTTCGTAACTCTGTTGCCGATGGTGGTAGTGGTTTTTATTTTCAGTTCTGGTCATCGACAGGT GCTAATACTGCATTTACAACCATGTTGTTGAAATGCGGCAGCAGTATGTCAGCACTAGATGTTTTTATAAAACCGTTATA TACCCGTGCTATGGGGATGGCATCACAAACAAAGGGGTGGGAAATAATAGGCACCAGTCGTGGATTTTACTTAATACCTC ACATGACAACTACGTTGCAAATGGGGCTCTCAAACGCAACACTGTATCATCAAGCGCGGTTTATTGGCGATATTGAAGCC AATACAACGCTCGACACCAGTCCTTTCGCAATTGTTGATACCGATGCAACTAATGCTGATGTAACTTCTACCACTGGTGC TGGTTTGAACTGGTTTGCATTGACATTCTGTGCACACATGAATAGTGCAGATGGTTCCAATGCCACTTATCTATATAACT GGACAAGGGGCGCTTTTGTATCAAATGCTACCGTTGATAGTGATGCTGAGTCGTTGGGTGTGAATCACAATATGGTCCCT GTAACAATCACAGGAGCGGTAAGTGTCAATGATGCAAACGGTGTGAGTCAAGTAAACAGTCTAAAAATGCCATATTGTCG CGGTTTAGTACCCGGTTTGCACAACTCCACTTTCGCTGGTTATCGAACAGTGAATTGGCCGAAGGATTTATTGGCAAATG ATGTTATATGGGTGCTGCTGCGCTCATTCTACAGTCCGCAACTCTGGATTAAAACAGGTACGTGGTATGATTAA
Upstream 100 bases:
>100_bases CGTCATGCTATTGCGCACAGTGCAAAGCGGTCACAGTCAAATCACCACCGACCGCGCAGTGCTGGCGTTCCGTGGCAACG AATCTTAATAGGGGGATGCA
Downstream 100 bases:
>100_bases TATTGCATTGAATACCGTAGTAAAAGCACCGATAAGTTTACGTGCAATAGTATCGGTAGATGCTGACATAGATGCGGAAC GCATTTTAATACTGAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MGLPVTIYRYTDAGAPQLTNGTPSEWIDILKKVLVEGYGSKAPLGWTLEFENAGAFKVAFRNSVADGGSGFYFQFWSSTG ANTAFTTMLLKCGSSMSALDVFIKPLYTRAMGMASQTKGWEIIGTSRGFYLIPHMTTTLQMGLSNATLYHQARFIGDIEA NTTLDTSPFAIVDTDATNADVTSTTGAGLNWFALTFCAHMNSADGSNATYLYNWTRGAFVSNATVDSDAESLGVNHNMVP VTITGAVSVNDANGVSQVNSLKMPYCRGLVPGLHNSTFAGYRTVNWPKDLLANDVIWVLLRSFYSPQLWIKTGTWYD
Sequences:
>Translated_317_residues MGLPVTIYRYTDAGAPQLTNGTPSEWIDILKKVLVEGYGSKAPLGWTLEFENAGAFKVAFRNSVADGGSGFYFQFWSSTG ANTAFTTMLLKCGSSMSALDVFIKPLYTRAMGMASQTKGWEIIGTSRGFYLIPHMTTTLQMGLSNATLYHQARFIGDIEA NTTLDTSPFAIVDTDATNADVTSTTGAGLNWFALTFCAHMNSADGSNATYLYNWTRGAFVSNATVDSDAESLGVNHNMVP VTITGAVSVNDANGVSQVNSLKMPYCRGLVPGLHNSTFAGYRTVNWPKDLLANDVIWVLLRSFYSPQLWIKTGTWYD >Mature_316_residues GLPVTIYRYTDAGAPQLTNGTPSEWIDILKKVLVEGYGSKAPLGWTLEFENAGAFKVAFRNSVADGGSGFYFQFWSSTGA NTAFTTMLLKCGSSMSALDVFIKPLYTRAMGMASQTKGWEIIGTSRGFYLIPHMTTTLQMGLSNATLYHQARFIGDIEAN TTLDTSPFAIVDTDATNADVTSTTGAGLNWFALTFCAHMNSADGSNATYLYNWTRGAFVSNATVDSDAESLGVNHNMVPV TITGAVSVNDANGVSQVNSLKMPYCRGLVPGLHNSTFAGYRTVNWPKDLLANDVIWVLLRSFYSPQLWIKTGTWYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34450; Mature: 34319
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPVTIYRYTDAGAPQLTNGTPSEWIDILKKVLVEGYGSKAPLGWTLEFENAGAFKVAF CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE RNSVADGGSGFYFQFWSSTGANTAFTTMLLKCGSSMSALDVFIKPLYTRAMGMASQTKGW ECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCE EIIGTSRGFYLIPHMTTTLQMGLSNATLYHQARFIGDIEANTTLDTSPFAIVDTDATNAD EEEECCCCEEECCCCCEEHHHCCCCCEEEEHHHEEECCCCCCEECCCCEEEEECCCCCCC VTSTTGAGLNWFALTFCAHMNSADGSNATYLYNWTRGAFVSNATVDSDAESLGVNHNMVP CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHCCCCCEEE VTITGAVSVNDANGVSQVNSLKMPYCRGLVPGLHNSTFAGYRTVNWPKDLLANDVIWVLL EEEEEEEEECCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH RSFYSPQLWIKTGTWYD HHHCCCEEEEECCCCCC >Mature Secondary Structure GLPVTIYRYTDAGAPQLTNGTPSEWIDILKKVLVEGYGSKAPLGWTLEFENAGAFKVAF CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEE RNSVADGGSGFYFQFWSSTGANTAFTTMLLKCGSSMSALDVFIKPLYTRAMGMASQTKGW ECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCE EIIGTSRGFYLIPHMTTTLQMGLSNATLYHQARFIGDIEANTTLDTSPFAIVDTDATNAD EEEECCCCEEECCCCCEEHHHCCCCCEEEEHHHEEECCCCCCEECCCCEEEEECCCCCCC VTSTTGAGLNWFALTFCAHMNSADGSNATYLYNWTRGAFVSNATVDSDAESLGVNHNMVP CCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHHCCCCCEEE VTITGAVSVNDANGVSQVNSLKMPYCRGLVPGLHNSTFAGYRTVNWPKDLLANDVIWVLL EEEEEEEEECCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH RSFYSPQLWIKTGTWYD HHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA