Click here to switch to the map view.

The map label for this gene is 126175766

Identifier: 126175766

GI number: 126175766

Start: 4195274

End: 4196338

Strand: Direct

Name: 126175766

Synonym: Sbal_3570

Alternate gene names: NA

Gene position: 4195274-4196338 (Clockwise)

Preceding gene: 126175765

Following gene: 126175774

Centisome position: 81.82

GC content: 41.31

Gene sequence:

>1065_bases
ATGAAAAAGACATTCATCTCTGCATCAGTTGCATCAGTATTGGCATTGGCTTCATTCGGTGCGCTAGCCGAAGGCCCAAG
CTTTTATGGTCGTTTAGAGCTTGCTTTAACCCATACTGACACTGCTGCTACCCTACAAGGCGGCACTAACGGTATTGATA
CTGCTAACTATGCCGATGAAAACAACGCTGGCACATACTTAGAAAACAACTTTTCTCTGTTAGGTGTAAAGGGTTCAGAA
AAGATTGCTGATGGCTTTGAAGCTATCTATCAAATGGAATTCCAAGTTGAAAATACATCAACAACTGGTGATGTATTTAA
AGCGCGTAATACTTATTTAGGTTTAAAAACTAACGCAGGTACTGTGTTAGTGGGTCGTAACGACACAGTATTCAAACAAG
CCGAAGGCGGTGTGGATATTTTCGGTAACACTAACGCCGATATCGACCGTTTAATCAGTGGCCAAACTCGTAGCGCTGAT
GGTATGTGGTACTACTCTCCAAAAATCGCTGGTTTAGTAACACTGAACGCGACTTATTTGTTTGATGATAACGACACTAC
TGCAAAAACTTCTGAAAGCTTATATGCATTAAGCGCGACTTTAGGCGATAAAGCGTTTAAAGATCAAAACTACTACGTCG
CTGTAGCTTATAACAAAGGTATTTCAGGTATTGATGCATACCGTGGTGTGGCTCAAGTTAAATTAGGCCAATTCAAAGTC
GGTGGTTTATTCCAACAATCAGAAAATGTTGTGAATAGCGATATCGATGGCAATACTTACTTCGTGAACGTTTCTTACGA
TCTGAACGGCGTAAACTTAAAAGCTGAATACGGTGCTGATGATGCTGGCTTCGGTAACTTCTACAAAAACGTTAATAAAG
GTGGCGCAACTGGCACTGATATCAACGTACAAAACTTCAACGTAGGTGCTGACTACCGTTTAGCTAAATCAACTATGGTA
TACGGCCAATACGCTATGTACCGCGGTGACCATGTTGTTGCTGGTAACAAAGTTGATCTACAAGATGACAACGTATTCTC
TGTAGGCGTACGTTACGACTTCTAA

Upstream 100 bases:

>100_bases
ATCGGCTGCAACTTTGTTACCGACTCAGGTAACAAATGCGTTAAACCACACAAAAACCATGAAAAATGGAAAAGAACTTA
GGTTCGAGGGAGCACAAAAC

Downstream 100 bases:

>100_bases
TCTCTTAACCCAGAGATAATTAAAAACCTACTGTAGCGATACAGTAGGTTTTTTTATGTCTCGAATCTAAAAGCAGTCGA
GACTCAGGCGATAAAAACAA

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Gram-Negative Porin Superfamily; Outer Membrane Porin Protein; Porin Signal Peptide Protein

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKKTFISASVASVLALASFGALAEGPSFYGRLELALTHTDTAATLQGGTNGIDTANYADENNAGTYLENNFSLLGVKGSE
KIADGFEAIYQMEFQVENTSTTGDVFKARNTYLGLKTNAGTVLVGRNDTVFKQAEGGVDIFGNTNADIDRLISGQTRSAD
GMWYYSPKIAGLVTLNATYLFDDNDTTAKTSESLYALSATLGDKAFKDQNYYVAVAYNKGISGIDAYRGVAQVKLGQFKV
GGLFQQSENVVNSDIDGNTYFVNVSYDLNGVNLKAEYGADDAGFGNFYKNVNKGGATGTDINVQNFNVGADYRLAKSTMV
YGQYAMYRGDHVVAGNKVDLQDDNVFSVGVRYDF

Sequences:

>Translated_354_residues
MKKTFISASVASVLALASFGALAEGPSFYGRLELALTHTDTAATLQGGTNGIDTANYADENNAGTYLENNFSLLGVKGSE
KIADGFEAIYQMEFQVENTSTTGDVFKARNTYLGLKTNAGTVLVGRNDTVFKQAEGGVDIFGNTNADIDRLISGQTRSAD
GMWYYSPKIAGLVTLNATYLFDDNDTTAKTSESLYALSATLGDKAFKDQNYYVAVAYNKGISGIDAYRGVAQVKLGQFKV
GGLFQQSENVVNSDIDGNTYFVNVSYDLNGVNLKAEYGADDAGFGNFYKNVNKGGATGTDINVQNFNVGADYRLAKSTMV
YGQYAMYRGDHVVAGNKVDLQDDNVFSVGVRYDF
>Mature_354_residues
MKKTFISASVASVLALASFGALAEGPSFYGRLELALTHTDTAATLQGGTNGIDTANYADENNAGTYLENNFSLLGVKGSE
KIADGFEAIYQMEFQVENTSTTGDVFKARNTYLGLKTNAGTVLVGRNDTVFKQAEGGVDIFGNTNADIDRLISGQTRSAD
GMWYYSPKIAGLVTLNATYLFDDNDTTAKTSESLYALSATLGDKAFKDQNYYVAVAYNKGISGIDAYRGVAQVKLGQFKV
GGLFQQSENVVNSDIDGNTYFVNVSYDLNGVNLKAEYGADDAGFGNFYKNVNKGGATGTDINVQNFNVGADYRLAKSTMV
YGQYAMYRGDHVVAGNKVDLQDDNVFSVGVRYDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38074; Mature: 38074

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTFISASVASVLALASFGALAEGPSFYGRLELALTHTDTAATLQGGTNGIDTANYADE
CCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCCCCCCCC
NNAGTYLENNFSLLGVKGSEKIADGFEAIYQMEFQVENTSTTGDVFKARNTYLGLKTNAG
CCCCCEEECCEEEEEECCCHHHHHHHHEEEEEEEEEECCCCCCHHEEECCEEEEEEECCC
TVLVGRNDTVFKQAEGGVDIFGNTNADIDRLISGQTRSADGMWYYSPKIAGLVTLNATYL
EEEECCCCCEEEECCCCEEEECCCCCCHHHHHCCCCCCCCCEEEECCCEEEEEEEEEEEE
FDDNDTTAKTSESLYALSATLGDKAFKDQNYYVAVAYNKGISGIDAYRGVAQVKLGQFKV
ECCCCCCCCCCCCEEEEEEHHCCHHCCCCCCEEEEEECCCCCCHHHHCCCEEEEECEEEE
GGLFQQSENVVNSDIDGNTYFVNVSYDLNGVNLKAEYGADDAGFGNFYKNVNKGGATGTD
CCEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCE
INVQNFNVGADYRLAKSTMVYGQYAMYRGDHVVAGNKVDLQDDNVFSVGVRYDF
EEEEEECCCCCCEEECEEEEEEEEEEEECCEEEECCEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MKKTFISASVASVLALASFGALAEGPSFYGRLELALTHTDTAATLQGGTNGIDTANYADE
CCCEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCCCCCCCCCC
NNAGTYLENNFSLLGVKGSEKIADGFEAIYQMEFQVENTSTTGDVFKARNTYLGLKTNAG
CCCCCEEECCEEEEEECCCHHHHHHHHEEEEEEEEEECCCCCCHHEEECCEEEEEEECCC
TVLVGRNDTVFKQAEGGVDIFGNTNADIDRLISGQTRSADGMWYYSPKIAGLVTLNATYL
EEEECCCCCEEEECCCCEEEECCCCCCHHHHHCCCCCCCCCEEEECCCEEEEEEEEEEEE
FDDNDTTAKTSESLYALSATLGDKAFKDQNYYVAVAYNKGISGIDAYRGVAQVKLGQFKV
ECCCCCCCCCCCCEEEEEEHHCCHHCCCCCCEEEEEECCCCCCHHHHCCCEEEEECEEEE
GGLFQQSENVVNSDIDGNTYFVNVSYDLNGVNLKAEYGADDAGFGNFYKNVNKGGATGTD
CCEEECCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCE
INVQNFNVGADYRLAKSTMVYGQYAMYRGDHVVAGNKVDLQDDNVFSVGVRYDF
EEEEEECCCCCCEEECEEEEEEEEEEEECCEEEECCEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA