| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175680
Identifier: 126175680
GI number: 126175680
Start: 4084358
End: 4084864
Strand: Reverse
Name: 126175680
Synonym: Sbal_3483
Alternate gene names: NA
Gene position: 4084864-4084358 (Counterclockwise)
Preceding gene: 126175684
Following gene: 126175679
Centisome position: 79.67
GC content: 49.7
Gene sequence:
>507_bases ATGAAGCGACGAACCTTTTTGATGGGCGCGTTTGCCGGTACGGCGGCGTTAGCCTTAGGGGTCAATCTTTATTCTCCTGA GTTTAGTTTGCCCGAGGACAGCGAAGGCAAAGATTATCGTTTGTTGTTTAGCGTGCTTTTACCTGTGATGCTCGACGGCG CTTTGCCTGATGTGGCCATCCATAAGTTGGCGGCGCAAAACCGCACTTTAGATGCCATCAAACAGTCGATTGCTGTGTTA CCCGATGAGCAGCAAACCGAGTTATTTGAACTGCTCGATATGCTCGAAAATCGCCTCGGCTTACTCGTACTGACCTCAAG CATGACACCGTTATTGATGCGCTCTCCCGCCGAGTTAACTGAAATGCTAGAAACCTGGCGCCACAGTTATTTTGCGCTAT TACAAACCGCTTATCTCGGGTTGCGGGAATTAGTGATGGCCAGTTACTACGCTTGCCCTGAACACTGGAGCCGCCTGCAT TATGCCAAACCTGAACTGTTCAAATAG
Upstream 100 bases:
>100_bases TTTTGAGGTCGCTTGGATATAAACGCGTGGGCAGTGTAGCACAATTGTTTTTTATGCTGATATTTAGGCCGACATTTAGA TTGATATTTAGGAGATAGAG
Downstream 100 bases:
>100_bases CTCGCCCGTTTGTAACCGAATAAAACGCCCAATAATAAGCATCTTACCCGCGACAGTGGAGCACTCAAGTTGGCAGTCAT AGATCCTATAGTGAATGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKRRTFLMGAFAGTAALALGVNLYSPEFSLPEDSEGKDYRLLFSVLLPVMLDGALPDVAIHKLAAQNRTLDAIKQSIAVL PDEQQTELFELLDMLENRLGLLVLTSSMTPLLMRSPAELTEMLETWRHSYFALLQTAYLGLRELVMASYYACPEHWSRLH YAKPELFK
Sequences:
>Translated_168_residues MKRRTFLMGAFAGTAALALGVNLYSPEFSLPEDSEGKDYRLLFSVLLPVMLDGALPDVAIHKLAAQNRTLDAIKQSIAVL PDEQQTELFELLDMLENRLGLLVLTSSMTPLLMRSPAELTEMLETWRHSYFALLQTAYLGLRELVMASYYACPEHWSRLH YAKPELFK >Mature_168_residues MKRRTFLMGAFAGTAALALGVNLYSPEFSLPEDSEGKDYRLLFSVLLPVMLDGALPDVAIHKLAAQNRTLDAIKQSIAVL PDEQQTELFELLDMLENRLGLLVLTSSMTPLLMRSPAELTEMLETWRHSYFALLQTAYLGLRELVMASYYACPEHWSRLH YAKPELFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19023; Mature: 19023
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00579 RIBOSOMAL_L29
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRTFLMGAFAGTAALALGVNLYSPEFSLPEDSEGKDYRLLFSVLLPVMLDGALPDVAI CCCCHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH HKLAAQNRTLDAIKQSIAVLPDEQQTELFELLDMLENRLGLLVLTSSMTPLLMRSPAELT HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCHHHHCCHHHHH EMLETWRHSYFALLQTAYLGLRELVMASYYACPEHWSRLHYAKPELFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MKRRTFLMGAFAGTAALALGVNLYSPEFSLPEDSEGKDYRLLFSVLLPVMLDGALPDVAI CCCCHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH HKLAAQNRTLDAIKQSIAVLPDEQQTELFELLDMLENRLGLLVLTSSMTPLLMRSPAELT HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCHHHHCCHHHHH EMLETWRHSYFALLQTAYLGLRELVMASYYACPEHWSRLHYAKPELFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA