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The map label for this gene is 126175679

Identifier: 126175679

GI number: 126175679

Start: 4082693

End: 4084288

Strand: Reverse

Name: 126175679

Synonym: Sbal_3482

Alternate gene names: NA

Gene position: 4084288-4082693 (Counterclockwise)

Preceding gene: 126175680

Following gene: 126175676

Centisome position: 79.66

GC content: 50.81

Gene sequence:

>1596_bases
TTGGCAGTCATAGATCCTATAGTGAATGGTTTAAACTCAGGTTGGTTACATACTGATGCTAGCCAATTGCAAGAAAACCA
ACAGTTTGAAGCCGATGTTATTATTGTCGGCACAGGTGCTGGCGGCGGTGTGGCGGCCGAAATCCTCGCCCAAGCTGGGC
TAAGCGTGATCATGATTGAGGCGGGGCCGCTAAAATCCTCCAGCGATTTTAATATGGAAGAGCGGGTCGCTTATCCCAAC
TTGTATCAACAAGCCGCGGCGATGAAAACCGCCGACAAGGCGATTGGGATTTTTCAAGGCCGCGCAGTCGGTGGCTCAAC
CACAGTTAACTGGACCACTTCTATTCGCACGCCGACCGAGGCGTTAGCTTTTTGGGCGCAACATAAGTCGGTTGCAGGGC
TTAATCGCGAGAGCTTAGACCCTTGGTTTGAGCAAATGGAGCAGCGGCTCAATATCCATGAATGGAACTATGAGCCTAAT
CGCAATAATGCCGCCCTGAAGCAAGGTTGTATCAATCTTGGTTGGGAATACACAGTCATTAAACGCAATGTGGCAGGTTG
TTGGAATACTGGCTATTGCGGCATGGGCTGTCCGGTCAATGCGAAGCAATCTATGTTAGTGACCACGATTCCCTCGGCAC
TTGAGAAAGGCGCGCAGCTGATCAGTCGCGCTAAAGTGACTAAGATTGAGCACCATAATGGTCAAGTGTTTGCGTTAAAA
GCGCAGGCGCTGGATGTGAATTTACGACCCACTGACGTTGAGCTGTTATTTAAGGCTAAACATTATATTTTGAGTGCGGG
CGCTATCCATACGCCGACGATTTTGATGCGCTCGCAGGTGCCCGATCCCCACAAACTTTTGGGTAAACGCACTTTTTTAC
ATCCGACCTTGTTATCCGGTGGCGTGTTTGCCGATTCGATCAATGGCCATAGCGGCGCGCCGCAATCTATCTATTCCGAT
GAATTTGTGTGGAAGAATGACGCCGATGGGGAGCTCGGCTATAAACTCGAAGTGCCGCCGGTGCACCCGATTTTAATCGC
CTCTAAAACTTTAGGTTATGGCGCGAGTCATGCCGAGTTAATGGCGCAGTTCAATCAGTTGCAAGTGACGATTGCCTTGA
TCCGCGATGGTTATCATCCCGACAGTCAGGGCGGTGAAGTGCACTTAACCCCTAAGGGATTTACCCTAGATTATCCGCTG
ACCGATGCCTTTTGGCGGGCCGCAAGACGCGCTTTTGCCAGTATGGCTGAGTTACAATTCTCGGCGGGCGCCTTAAAAGT
GTTGCCGATCAGCGATGGTATGCCTTACTTATCTTCGTGGAAAGACGCCAAAGAGAGCATTGCGCAGATGTCACTCGCGC
CACTGCGTACTATCGTCGCATCGGCCCATGTGATGGGCGGTTGTCCCTTCGGCGAAGATGAAAAGCTTTCTATGGTCAAC
AGTTATGGCCAGTCGCACTATTTAGAAAATCTGTCTGTAATGGATGGGTCTATCTTCCCGACCAGCCTTGGCGCTAACCC
GCAGCTGTCGATTTATGGCATCACAGCACGTAATGCCACCGCACTTGCACAAAAACTCACCGACGGCAAAGGGTGA

Upstream 100 bases:

>100_bases
GCATTATGCCAAACCTGAACTGTTCAAATAGCTCGCCCGTTTGTAACCGAATAAAACGCCCAATAATAAGCATCTTACCC
GCGACAGTGGAGCACTCAAG

Downstream 100 bases:

>100_bases
TTTTTTATTCTAGCCAATGATTCTGCTGCAGAGGGCTCAGCTGCAGAAACGTATGTTGCCTAAGATCATGCTTGCTGTGG
GTTAGGGCTGAATGGCGCTA

Product: glucose-methanol-choline oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MAVIDPIVNGLNSGWLHTDASQLQENQQFEADVIIVGTGAGGGVAAEILAQAGLSVIMIEAGPLKSSSDFNMEERVAYPN
LYQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRTPTEALAFWAQHKSVAGLNRESLDPWFEQMEQRLNIHEWNYEPN
RNNAALKQGCINLGWEYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPSALEKGAQLISRAKVTKIEHHNGQVFALK
AQALDVNLRPTDVELLFKAKHYILSAGAIHTPTILMRSQVPDPHKLLGKRTFLHPTLLSGGVFADSINGHSGAPQSIYSD
EFVWKNDADGELGYKLEVPPVHPILIASKTLGYGASHAELMAQFNQLQVTIALIRDGYHPDSQGGEVHLTPKGFTLDYPL
TDAFWRAARRAFASMAELQFSAGALKVLPISDGMPYLSSWKDAKESIAQMSLAPLRTIVASAHVMGGCPFGEDEKLSMVN
SYGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGKG

Sequences:

>Translated_531_residues
MAVIDPIVNGLNSGWLHTDASQLQENQQFEADVIIVGTGAGGGVAAEILAQAGLSVIMIEAGPLKSSSDFNMEERVAYPN
LYQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRTPTEALAFWAQHKSVAGLNRESLDPWFEQMEQRLNIHEWNYEPN
RNNAALKQGCINLGWEYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPSALEKGAQLISRAKVTKIEHHNGQVFALK
AQALDVNLRPTDVELLFKAKHYILSAGAIHTPTILMRSQVPDPHKLLGKRTFLHPTLLSGGVFADSINGHSGAPQSIYSD
EFVWKNDADGELGYKLEVPPVHPILIASKTLGYGASHAELMAQFNQLQVTIALIRDGYHPDSQGGEVHLTPKGFTLDYPL
TDAFWRAARRAFASMAELQFSAGALKVLPISDGMPYLSSWKDAKESIAQMSLAPLRTIVASAHVMGGCPFGEDEKLSMVN
SYGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGKG
>Mature_530_residues
AVIDPIVNGLNSGWLHTDASQLQENQQFEADVIIVGTGAGGGVAAEILAQAGLSVIMIEAGPLKSSSDFNMEERVAYPNL
YQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRTPTEALAFWAQHKSVAGLNRESLDPWFEQMEQRLNIHEWNYEPNR
NNAALKQGCINLGWEYTVIKRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPSALEKGAQLISRAKVTKIEHHNGQVFALKA
QALDVNLRPTDVELLFKAKHYILSAGAIHTPTILMRSQVPDPHKLLGKRTFLHPTLLSGGVFADSINGHSGAPQSIYSDE
FVWKNDADGELGYKLEVPPVHPILIASKTLGYGASHAELMAQFNQLQVTIALIRDGYHPDSQGGEVHLTPKGFTLDYPLT
DAFWRAARRAFASMAELQFSAGALKVLPISDGMPYLSSWKDAKESIAQMSLAPLRTIVASAHVMGGCPFGEDEKLSMVNS
YGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGKG

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GMC oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000172
- InterPro:   IPR007867 [H]

Pfam domain/function: PF05199 GMC_oxred_C; PF00732 GMC_oxred_N [H]

EC number: NA

Molecular weight: Translated: 57463; Mature: 57332

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIDPIVNGLNSGWLHTDASQLQENQQFEADVIIVGTGAGGGVAAEILAQAGLSVIMIE
CCCHHHHHHCCCCCCEECCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEE
AGPLKSSSDFNMEERVAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRTPTE
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCHHH
ALAFWAQHKSVAGLNRESLDPWFEQMEQRLNIHEWNYEPNRNNAALKQGCINLGWEYTVI
HHHHHHHHHHHCCCCHHCCCHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHCCEEEEEE
KRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPSALEKGAQLISRAKVTKIEHHNGQVFALK
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHEEEEECCCEEEEEE
AQALDVNLRPTDVELLFKAKHYILSAGAIHTPTILMRSQVPDPHKLLGKRTFLHPTLLSG
EEEEEEECCCCCHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHCCHHCCCHHHHCC
GVFADSINGHSGAPQSIYSDEFVWKNDADGELGYKLEVPPVHPILIASKTLGYGASHAEL
CEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHH
MAQFNQLQVTIALIRDGYHPDSQGGEVHLTPKGFTLDYPLTDAFWRAARRAFASMAELQF
HHHHHHHEEEEEEEECCCCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHC
SAGALKVLPISDGMPYLSSWKDAKESIAQMSLAPLRTIVASAHVMGGCPFGEDEKLSMVN
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
SYGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGKG
HCCHHHHHHCHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCC
>Mature Secondary Structure 
AVIDPIVNGLNSGWLHTDASQLQENQQFEADVIIVGTGAGGGVAAEILAQAGLSVIMIE
CCHHHHHHCCCCCCEECCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEE
AGPLKSSSDFNMEERVAYPNLYQQAAAMKTADKAIGIFQGRAVGGSTTVNWTTSIRTPTE
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCHHH
ALAFWAQHKSVAGLNRESLDPWFEQMEQRLNIHEWNYEPNRNNAALKQGCINLGWEYTVI
HHHHHHHHHHHCCCCHHCCCHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHCCEEEEEE
KRNVAGCWNTGYCGMGCPVNAKQSMLVTTIPSALEKGAQLISRAKVTKIEHHNGQVFALK
ECCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHEEEEECCCEEEEEE
AQALDVNLRPTDVELLFKAKHYILSAGAIHTPTILMRSQVPDPHKLLGKRTFLHPTLLSG
EEEEEEECCCCCHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHCCHHCCCHHHHCC
GVFADSINGHSGAPQSIYSDEFVWKNDADGELGYKLEVPPVHPILIASKTLGYGASHAEL
CEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEEEECCCCCEEEEEECCCCCCCHHHHH
MAQFNQLQVTIALIRDGYHPDSQGGEVHLTPKGFTLDYPLTDAFWRAARRAFASMAELQF
HHHHHHHEEEEEEEECCCCCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHC
SAGALKVLPISDGMPYLSSWKDAKESIAQMSLAPLRTIVASAHVMGGCPFGEDEKLSMVN
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
SYGQSHYLENLSVMDGSIFPTSLGANPQLSIYGITARNATALAQKLTDGKG
HCCHHHHHHCHHCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]