| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175570
Identifier: 126175570
GI number: 126175570
Start: 3944470
End: 3945531
Strand: Reverse
Name: 126175570
Synonym: Sbal_3373
Alternate gene names: NA
Gene position: 3945531-3944470 (Counterclockwise)
Preceding gene: 126175574
Following gene: 126175569
Centisome position: 76.95
GC content: 33.15
Gene sequence:
>1062_bases ATGAGTAATGTTGAAGAGCAGATAAAAGAGTTAAAGAAAGAGGTTTCTTTTGATACTAGAGATTTTACAATAGAAATCAT AGTTCAAAAGTATAATAAAGGGTTGGATAATGACGAAAATGAAATTTTTGTTCCAGATTATCAAAGAGACTTTGTATGGG ATGAAGAACGGCAATCTAAAATGGTCGAGTCAATTATTTTAGGACTTCCTATACCATCAATATTTGTTGCTGAGGATGTT AATGGTCGTCTGGAGATTGTTGATGGTTCTCAAAGAATAAGAACTCTAAGTGCATTTATAAATGAAGAGCTTGTTTTAAA AGAACTGAGTAAGGTGACATCTTTAAATGGAAAGAAATTCTCTGAGCTTGATGAGTCGAGGAAGCGGAAATTTAATAATA CAGCGATAAGTATGATAGTTCTATCTGAAGAAACATCTCCAGAAATGAGGAATGACTTGTTTGAAAGAATTAACAAAGGC AGTGATATTTTAAGAGGGATGGAGGTTAGGAAAGGAATATATACAGGAGGGTTTACAGATTTTCTTTATTCTAAATGTTC AAACAATACAAAATTTCGATCAATGATTAAATTGTCTAGTTCAGTGCGGAATAGGCAAGAGTATGAAGAGTTAATATTGA GATTTTTTGCTATAAGTGAAAAGTATCCTAAGTATTCAACTTTCTCTAGAAATGTGGGGTCTGCATTAGATGATTATATT AAGGATAAAAATTTTAATTTCACAGTGGAAGAAGAGAGATTAATGTTAGCTAATTTCAATAGCATGGTTAACTTCGTTCA TGATAATTTTTTGTTCGGCTTTTCAAAAAATGAAGGTAAAGAGACTTCGCGTATGTTTTTTGAGGCTTTATCGGTAGGGA CTCATCTAGCCTTGAAGGAAAAGCCAAGATTAGAATTGAGAAAAAAGGTAGATGCTAGGGAGTGGTTAAATGACTATGGT TTCAAATGTGCAACAATGGGAAAATATCGTACACACTCAACTGTTACGTTAAGGTCCAGGGTTGATTTTGTTATGGGCAA GTTGCTTTTTCTGAGTAGGTGA
Upstream 100 bases:
>100_bases TATCGTACTTTATTTTTATAGATTTTAATTAAGCTTTAGGTAAGAAAATTTCATTAGATTTTTATTATTTATTCTATATA AAAAGAGAAAGGAGAAGTAA
Downstream 100 bases:
>100_bases GTTTATATGGAACTCATTAAAAGTGACTTTCATACTAGATGCTCTGATATTAAGATTCTTTATTATCATATAGTTTTAAT TAGCTCGGAAAGAGGTACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSNVEEQIKELKKEVSFDTRDFTIEIIVQKYNKGLDNDENEIFVPDYQRDFVWDEERQSKMVESIILGLPIPSIFVAEDV NGRLEIVDGSQRIRTLSAFINEELVLKELSKVTSLNGKKFSELDESRKRKFNNTAISMIVLSEETSPEMRNDLFERINKG SDILRGMEVRKGIYTGGFTDFLYSKCSNNTKFRSMIKLSSSVRNRQEYEELILRFFAISEKYPKYSTFSRNVGSALDDYI KDKNFNFTVEEERLMLANFNSMVNFVHDNFLFGFSKNEGKETSRMFFEALSVGTHLALKEKPRLELRKKVDAREWLNDYG FKCATMGKYRTHSTVTLRSRVDFVMGKLLFLSR
Sequences:
>Translated_353_residues MSNVEEQIKELKKEVSFDTRDFTIEIIVQKYNKGLDNDENEIFVPDYQRDFVWDEERQSKMVESIILGLPIPSIFVAEDV NGRLEIVDGSQRIRTLSAFINEELVLKELSKVTSLNGKKFSELDESRKRKFNNTAISMIVLSEETSPEMRNDLFERINKG SDILRGMEVRKGIYTGGFTDFLYSKCSNNTKFRSMIKLSSSVRNRQEYEELILRFFAISEKYPKYSTFSRNVGSALDDYI KDKNFNFTVEEERLMLANFNSMVNFVHDNFLFGFSKNEGKETSRMFFEALSVGTHLALKEKPRLELRKKVDAREWLNDYG FKCATMGKYRTHSTVTLRSRVDFVMGKLLFLSR >Mature_352_residues SNVEEQIKELKKEVSFDTRDFTIEIIVQKYNKGLDNDENEIFVPDYQRDFVWDEERQSKMVESIILGLPIPSIFVAEDVN GRLEIVDGSQRIRTLSAFINEELVLKELSKVTSLNGKKFSELDESRKRKFNNTAISMIVLSEETSPEMRNDLFERINKGS DILRGMEVRKGIYTGGFTDFLYSKCSNNTKFRSMIKLSSSVRNRQEYEELILRFFAISEKYPKYSTFSRNVGSALDDYIK DKNFNFTVEEERLMLANFNSMVNFVHDNFLFGFSKNEGKETSRMFFEALSVGTHLALKEKPRLELRKKVDAREWLNDYGF KCATMGKYRTHSTVTLRSRVDFVMGKLLFLSR
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41224; Mature: 41092
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVEEQIKELKKEVSFDTRDFTIEIIVQKYNKGLDNDENEIFVPDYQRDFVWDEERQSK CCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHH MVESIILGLPIPSIFVAEDVNGRLEIVDGSQRIRTLSAFINEELVLKELSKVTSLNGKKF HHHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SELDESRKRKFNNTAISMIVLSEETSPEMRNDLFERINKGSDILRGMEVRKGIYTGGFTD HHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHH FLYSKCSNNTKFRSMIKLSSSVRNRQEYEELILRFFAISEKYPKYSTFSRNVGSALDDYI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KDKNFNFTVEEERLMLANFNSMVNFVHDNFLFGFSKNEGKETSRMFFEALSVGTHLALKE CCCCCCEEEHHCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCHHEEECC KPRLELRKKVDAREWLNDYGFKCATMGKYRTHSTVTLRSRVDFVMGKLLFLSR CCHHHHHHHCCHHHHHHHHCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNVEEQIKELKKEVSFDTRDFTIEIIVQKYNKGLDNDENEIFVPDYQRDFVWDEERQSK CCHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHH MVESIILGLPIPSIFVAEDVNGRLEIVDGSQRIRTLSAFINEELVLKELSKVTSLNGKKF HHHHHHHCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH SELDESRKRKFNNTAISMIVLSEETSPEMRNDLFERINKGSDILRGMEVRKGIYTGGFTD HHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHH FLYSKCSNNTKFRSMIKLSSSVRNRQEYEELILRFFAISEKYPKYSTFSRNVGSALDDYI HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH KDKNFNFTVEEERLMLANFNSMVNFVHDNFLFGFSKNEGKETSRMFFEALSVGTHLALKE CCCCCCEEEHHCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCHHEEECC KPRLELRKKVDAREWLNDYGFKCATMGKYRTHSTVTLRSRVDFVMGKLLFLSR CCHHHHHHHCCHHHHHHHHCCEEEECCCCCCCCEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA