| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175527
Identifier: 126175527
GI number: 126175527
Start: 3894866
End: 3895318
Strand: Reverse
Name: 126175527
Synonym: Sbal_3329
Alternate gene names: NA
Gene position: 3895318-3894866 (Counterclockwise)
Preceding gene: 126175528
Following gene: 126175524
Centisome position: 75.97
GC content: 45.7
Gene sequence:
>453_bases ATGATGGATAAGCTTATGCGTACTCAAGAAGTGTTATGCCCTACGGATTTTTCATCCACCGCAGCCCATGCGCTCAAATA TGCGGTTGAAATGGCTAATCTTTATCATGTCGATATTCGATTATTGCATGTGACAAGCCCAGCCCGTGGCGCCCATTGCT ATGGTATTGCGGTCGATATTCCAGCCACATTGGAAAATGAACTTCAAGCCTTTGTCGATGCAAAAATGCAAAGTTTGCAG CAGGAAATGCAGCAAGATCTCAACGAGGGACTCAATATTAAGCTAGTGGTGCGCCATGGTGATGCTATCGATGAGATTTT AGCGGAAGCCGTTGATGTCGGCATGGTGGTGATTGCCAGTCACGGCAGCAGTGGTTTAGCGGATTTTTTAAAGCCCCATG TGACACAAGATATTGTTAAGTATGCTAAGTGCCCTGTGCTGGTGGTGAAATAA
Upstream 100 bases:
>100_bases GATAAAGAATAATTAATTGAAATGGGTACGCAAGAAGCATAGCTAACTGCTATAAAATAGTGGTATTTTGACTTTAATAA ATAGCCTGATTAAAACTCAA
Downstream 100 bases:
>100_bases AGCTTAGATATATAGGTTTAAGTAAAGAGCTTTAGATAAAGCTCTTTGAGAAAACCTAGTAGGAATCATTTTTTATTATT TTAGGTTCAGTTAGCTTGTT
Product: UspA domain-containing protein
Products: NA
Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein Family; Universal Stress Protein UspA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MMDKLMRTQEVLCPTDFSSTAAHALKYAVEMANLYHVDIRLLHVTSPARGAHCYGIAVDIPATLENELQAFVDAKMQSLQ QEMQQDLNEGLNIKLVVRHGDAIDEILAEAVDVGMVVIASHGSSGLADFLKPHVTQDIVKYAKCPVLVVK
Sequences:
>Translated_150_residues MMDKLMRTQEVLCPTDFSSTAAHALKYAVEMANLYHVDIRLLHVTSPARGAHCYGIAVDIPATLENELQAFVDAKMQSLQ QEMQQDLNEGLNIKLVVRHGDAIDEILAEAVDVGMVVIASHGSSGLADFLKPHVTQDIVKYAKCPVLVVK >Mature_150_residues MMDKLMRTQEVLCPTDFSSTAAHALKYAVEMANLYHVDIRLLHVTSPARGAHCYGIAVDIPATLENELQAFVDAKMQSLQ QEMQQDLNEGLNIKLVVRHGDAIDEILAEAVDVGMVVIASHGSSGLADFLKPHVTQDIVKYAKCPVLVVK
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16441; Mature: 16441
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDKLMRTQEVLCPTDFSSTAAHALKYAVEMANLYHVDIRLLHVTSPARGAHCYGIAVDI CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCEEEEEEEEC PATLENELQAFVDAKMQSLQQEMQQDLNEGLNIKLVVRHGDAIDEILAEAVDVGMVVIAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCEEEEEE HGSSGLADFLKPHVTQDIVKYAKCPVLVVK CCCCCHHHHHHHHHHHHHHHHHCCCEEEEC >Mature Secondary Structure MMDKLMRTQEVLCPTDFSSTAAHALKYAVEMANLYHVDIRLLHVTSPARGAHCYGIAVDI CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEEEEECCCCCCEEEEEEEEC PATLENELQAFVDAKMQSLQQEMQQDLNEGLNIKLVVRHGDAIDEILAEAVDVGMVVIAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCEEEEEE HGSSGLADFLKPHVTQDIVKYAKCPVLVVK CCCCCHHHHHHHHHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA