Definition Shewanella baltica OS155 chromosome, complete genome.
Accession NC_009052
Length 5,127,376

Click here to switch to the map view.

The map label for this gene is 126175528

Identifier: 126175528

GI number: 126175528

Start: 3895481

End: 3895912

Strand: Reverse

Name: 126175528

Synonym: Sbal_3330

Alternate gene names: NA

Gene position: 3895912-3895481 (Counterclockwise)

Preceding gene: 126175529

Following gene: 126175527

Centisome position: 75.98

GC content: 46.99

Gene sequence:

>432_bases
ATGCGTACAGGTCAAATACTCTGGCCCACAGATTTTTCGGAAACTGCGGCCCATGCACTGAGTTATGCCATTGAAATGGC
TAATTTATACCATGTAGGACTAAAAATTTTACACGTGGTTGAACAGCCGCTCGGTGATGAAAACTTTATGATTTTATCGA
TCACTCCAGAAGAGCTGGCTAAGAGTATGGAGGAAGCGGCAGCAACCAAGATGCAGGCGCTGTTAGAAGGGTTAAACACT
GAACTTTCCATCACGACCTTGATCCGCCGCGGCGATCCTGTGTACCAGATTTTAGAAGAGGCCAACAGTAAAGATATTGG
CATGGTAGTGATAGCGAGCCATGGCCGAACTGGGATTTCGCATTTTTTACACACCAATGTTGCAGAAGCGGTAGCTAACG
GTGCGGCTTGTCCTGTGCTGGTGGTGAAGTAA

Upstream 100 bases:

>100_bases
CTGCTGAGGTCAGGTTTTTTGTTGATAATGGCGACGCCGTTGCTTGGTTAAAAGACTAGTTGCTCAGCAATCCATTCGCG
CCATAGAAGGAGTACAGATT

Downstream 100 bases:

>100_bases
GTGAGTTAGTGGCTTGACTCAATAAATCCAAAGGACGCTTATTGCGTCCTTTCTTTTTGATTGATAAAGAATAATTAATT
GAAATGGGTACGCAAGAAGC

Product: UspA domain-containing protein

Products: NA

Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein Family; Stress Response Protein; Universal Stress Protein Usp; Uspa Domain-Containing Protein; Universal Stress Protein UspA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELAKSMEEAAATKMQALLEGLNT
ELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGISHFLHTNVAEAVANGAACPVLVVK

Sequences:

>Translated_143_residues
MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELAKSMEEAAATKMQALLEGLNT
ELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGISHFLHTNVAEAVANGAACPVLVVK
>Mature_143_residues
MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELAKSMEEAAATKMQALLEGLNT
ELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGISHFLHTNVAEAVANGAACPVLVVK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15511; Mature: 15511

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELA
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHH
KSMEEAAATKMQALLEGLNTELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGIS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCHHHH
HFLHTNVAEAVANGAACPVLVVK
HHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MRTGQILWPTDFSETAAHALSYAIEMANLYHVGLKILHVVEQPLGDENFMILSITPEELA
CCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHH
KSMEEAAATKMQALLEGLNTELSITTLIRRGDPVYQILEEANSKDIGMVVIASHGRTGIS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCHHHH
HFLHTNVAEAVANGAACPVLVVK
HHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA