| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175496
Identifier: 126175496
GI number: 126175496
Start: 3858352
End: 3859251
Strand: Direct
Name: 126175496
Synonym: Sbal_3296
Alternate gene names: NA
Gene position: 3858352-3859251 (Clockwise)
Preceding gene: 126175495
Following gene: 126175497
Centisome position: 75.25
GC content: 49.44
Gene sequence:
>900_bases GTGGCGCAAGATGTCATCACGCAAGCACCATTAGGTTTTGGCTTAGGTCTGAGGACACAGCATTTTGATGCCGTGCTCAA TACTGAGCCCGATATCGATTGGTTTGAAGTGCTCTCGGAAAACTACATGGTCGCCGGCGGTAAACCCCGCTATTACCTCA AGGAAATTGGCGAGCGCTATCCCCTGGTGATGCACGGTGTTTCTCTGTCGATTGGCAGTACCGACCCGCTCAATATGGAT TACCTTAAAGCCTTAAAGCAGCTCGCCAACGATGTGCAGCCCCAATGGATTTCCGATCATATCTGCTGGACCTCAATTCA CGGGGTGAACAGCCATGATCTCCTGCCACTGCCCTATACCGAAGAAACCGTTAAGCATGTGGCGCAGCGGATTAAAACCG TCCAAGATTTTTTAGGCCGCCGCATTCTGATGGAGAACGTTTCTAGCTATTTGTCCTATCAAGATTCCAGCATGGACGAA TGGGAATTCGTTAATGCCGTTGCTGAGGCTGCAGACTGTTTAATCTTGTTAGACATCAATAATATTTACGTCAGTGCCCG CAATCACAATTTCAACCCGTTGGACTATTTGAATAAAATCAATCCCAAACGGGTGCAGCAATTCCACCTTGCCGGACACA GCGACTATGGCGACTATGTGATAGACACGCACGACCATGATGTACCAAGCTGCGTGTGGGACCTCTACTGTGCAGCACTG AAACGTTTTGGCGGCATCAGCACTATGATAGAGCGCGACGCCAATATCCCCGAGTTTTACGCCCTCGAAGCCGAACTCAC GATTGCCAGAAATATCGCCCGCGATACCTTAGGTAAGGCGCATCCACTCAACGCCGCCAAGAATAGAAAGAACATGCATG AAGGAAAGGTTATCGCATGA
Upstream 100 bases:
>100_bases CCAATATGCTGATTAAAAATCGTGACCAGCTTAGTGCTGGTCACGTTTATCCCCCTGTTTACCACACATTCAGCAGAAAA CTTAAGGATAAGGAGTCAAT
Downstream 100 bases:
>100_bases GCCAACTTCAGCAGCTACAACACGCATTTATGGATTATCTGCTGGCGAGTGCTGCGGTAGATACACCGCCCACACTTGCG CAAACCACGCAAACCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MAQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERYPLVMHGVSLSIGSTDPLNMD YLKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYTEETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDE WEFVNAVAEAADCLILLDINNIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSCVWDLYCAAL KRFGGISTMIERDANIPEFYALEAELTIARNIARDTLGKAHPLNAAKNRKNMHEGKVIA
Sequences:
>Translated_299_residues MAQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERYPLVMHGVSLSIGSTDPLNMD YLKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYTEETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDE WEFVNAVAEAADCLILLDINNIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSCVWDLYCAAL KRFGGISTMIERDANIPEFYALEAELTIARNIARDTLGKAHPLNAAKNRKNMHEGKVIA >Mature_298_residues AQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERYPLVMHGVSLSIGSTDPLNMDY LKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYTEETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDEW EFVNAVAEAADCLILLDINNIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSCVWDLYCAALK RFGGISTMIERDANIPEFYALEAELTIARNIARDTLGKAHPLNAAKNRKNMHEGKVIA
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007801 - InterPro: IPR013022 [H]
Pfam domain/function: PF05114 DUF692 [H]
EC number: NA
Molecular weight: Translated: 33919; Mature: 33788
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERY CCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCHHHHHHCCCC PLVMHGVSLSIGSTDPLNMDYLKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYT CEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCCCCCEECCCCC EETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDEWEFVNAVAEAADCLILLDIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEC NIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSCVWDLYCAAL EEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHH KRFGGISTMIERDANIPEFYALEAELTIARNIARDTLGKAHPLNAAKNRKNMHEGKVIA HHHCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure AQDVITQAPLGFGLGLRTQHFDAVLNTEPDIDWFEVLSENYMVAGGKPRYYLKEIGERY CCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCEEEECCCCCHHHHHHCCCC PLVMHGVSLSIGSTDPLNMDYLKALKQLANDVQPQWISDHICWTSIHGVNSHDLLPLPYT CEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHCCCCCEEEECCCCCCCEECCCCC EETVKHVAQRIKTVQDFLGRRILMENVSSYLSYQDSSMDEWEFVNAVAEAADCLILLDIN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEEEC NIYVSARNHNFNPLDYLNKINPKRVQQFHLAGHSDYGDYVIDTHDHDVPSCVWDLYCAAL EEEEEECCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHH KRFGGISTMIERDANIPEFYALEAELTIARNIARDTLGKAHPLNAAKNRKNMHEGKVIA HHHCCHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA