| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175497
Identifier: 126175497
GI number: 126175497
Start: 3859248
End: 3860060
Strand: Direct
Name: 126175497
Synonym: Sbal_3297
Alternate gene names: NA
Gene position: 3859248-3860060 (Clockwise)
Preceding gene: 126175496
Following gene: 126175499
Centisome position: 75.27
GC content: 50.31
Gene sequence:
>813_bases ATGAGCCAACTTCAGCAGCTACAACACGCATTTATGGATTATCTGCTGGCGAGTGCTGCGGTAGATACACCGCCCACACT TGCGCAAACCACGCAAACCTTCAAAGATAAGATTGCCGAGCAAGGCGGCATTAATGCTGATATTCGGATGCAGATTTATG CCAATGCTTATCGCATTCGTTTAACCGAAACCCTCGAAACCGACCACGAAATGCTGGGCATCTATCTGGGTGATGAACTC TTCGAGCGTATGGCCAAAGGTTATATTGCCAGTCAGCCATCGGCGTTTACTTCACTGCGCAGTTTTGCCGATGCCCTGCC CGACTACTTAACCCAAGATGCGTTTTTCAGTCAGTATCCGATCATTGCCGATATTGCTCGCTTCGAGCGGCGTTTATTGA ATGCCTTCGATGCTTTTGATACCGAGCGCGCCACTTTTGCCCGCCTGCAAGCACTGCCTGCCGAGCAATGGCCGGGTTGC CAACTGCGTTTTCATCCCAGCGTGCAGCTTTTCCAATGTAACAGTAATGCGGTTGAAACTTGGCAAGCATTAAAACAGCA AGCATCACCGCCAAGTCCCGATTATCAAGGCAAACGAGCTTGGTTACTTTGGCGCGGCGAAAGCCGATTAACTGAGTTTA TTTCCCTATCCGAATATCAACTCGCCCTGCTGCTGGGATTTATTGGCGGTGCCACCTTTGCCGAACAATGCGAAATGATG TTGGCATTTTTTAGCGACGCGCAGGCGCCGATGCAAGTGCTGCAGGCACTGCAAGCTTGGTTTCAAATGGGGCTTATCCG CGATATAGCCTAA
Upstream 100 bases:
>100_bases TCACGATTGCCAGAAATATCGCCCGCGATACCTTAGGTAAGGCGCATCCACTCAACGCCGCCAAGAATAGAAAGAACATG CATGAAGGAAAGGTTATCGC
Downstream 100 bases:
>100_bases TGCGCAAATCGGTTTGGAGATTGAGTGTTAGCCAGATTTAAAGTGAATTAACTTGAGTGAGTTTAAGTTGTTTTATTTGG CTTGATTTAGCGAGCTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSQLQQLQHAFMDYLLASAAVDTPPTLAQTTQTFKDKIAEQGGINADIRMQIYANAYRIRLTETLETDHEMLGIYLGDEL FERMAKGYIASQPSAFTSLRSFADALPDYLTQDAFFSQYPIIADIARFERRLLNAFDAFDTERATFARLQALPAEQWPGC QLRFHPSVQLFQCNSNAVETWQALKQQASPPSPDYQGKRAWLLWRGESRLTEFISLSEYQLALLLGFIGGATFAEQCEMM LAFFSDAQAPMQVLQALQAWFQMGLIRDIA
Sequences:
>Translated_270_residues MSQLQQLQHAFMDYLLASAAVDTPPTLAQTTQTFKDKIAEQGGINADIRMQIYANAYRIRLTETLETDHEMLGIYLGDEL FERMAKGYIASQPSAFTSLRSFADALPDYLTQDAFFSQYPIIADIARFERRLLNAFDAFDTERATFARLQALPAEQWPGC QLRFHPSVQLFQCNSNAVETWQALKQQASPPSPDYQGKRAWLLWRGESRLTEFISLSEYQLALLLGFIGGATFAEQCEMM LAFFSDAQAPMQVLQALQAWFQMGLIRDIA >Mature_269_residues SQLQQLQHAFMDYLLASAAVDTPPTLAQTTQTFKDKIAEQGGINADIRMQIYANAYRIRLTETLETDHEMLGIYLGDELF ERMAKGYIASQPSAFTSLRSFADALPDYLTQDAFFSQYPIIADIARFERRLLNAFDAFDTERATFARLQALPAEQWPGCQ LRFHPSVQLFQCNSNAVETWQALKQQASPPSPDYQGKRAWLLWRGESRLTEFISLSEYQLALLLGFIGGATFAEQCEMML AFFSDAQAPMQVLQALQAWFQMGLIRDIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30626; Mature: 30495
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00318 HMG_COA_REDUCTASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLQQLQHAFMDYLLASAAVDTPPTLAQTTQTFKDKIAEQGGINADIRMQIYANAYRIR CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECEEEEE LTETLETDHEMLGIYLGDELFERMAKGYIASQPSAFTSLRSFADALPDYLTQDAFFSQYP EHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC IIADIARFERRLLNAFDAFDTERATFARLQALPAEQWPGCQLRFHPSVQLFQCNSNAVET HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCHHHHH WQALKQQASPPSPDYQGKRAWLLWRGESRLTEFISLSEYQLALLLGFIGGATFAEQCEMM HHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LAFFSDAQAPMQVLQALQAWFQMGLIRDIA HHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQLQQLQHAFMDYLLASAAVDTPPTLAQTTQTFKDKIAEQGGINADIRMQIYANAYRIR CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECEEEEE LTETLETDHEMLGIYLGDELFERMAKGYIASQPSAFTSLRSFADALPDYLTQDAFFSQYP EHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC IIADIARFERRLLNAFDAFDTERATFARLQALPAEQWPGCQLRFHPSVQLFQCNSNAVET HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCHHHHH WQALKQQASPPSPDYQGKRAWLLWRGESRLTEFISLSEYQLALLLGFIGGATFAEQCEMM HHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LAFFSDAQAPMQVLQALQAWFQMGLIRDIA HHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA