| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yecA [C]
Identifier: 126175489
GI number: 126175489
Start: 3851426
End: 3851764
Strand: Direct
Name: yecA [C]
Synonym: Sbal_3289
Alternate gene names: 126175489
Gene position: 3851426-3851764 (Clockwise)
Preceding gene: 126175485
Following gene: 126175493
Centisome position: 75.11
GC content: 44.54
Gene sequence:
>339_bases ATGTCTGACAAATTTTTCTTCAAAGGTCGTAAAACACCTAAGCCAAAGCATGAGAGCTTTGGCTACAACACTAAGCGTGC CGCTAAACCGGGTACAGAAGCCTTACCTCTGCAATTAATCGTTGCCGATGAAACGCGTAAACTCGAAGTTGCTGCGATTG TTGCCGAACACCAACTGTTTGCTAATATCGAAGTCAATGCCGACGTTGCTGAAGATATCCTTGAGTTAGAAGGTTTATTG AATAAGCCTAAGACCACAACGTTCGAGAAGAAACCGAATCGTAACGAGCCTTGCGCTTGTGGTAGCGGTCAAAAATTCAA GAAGTGCTGCGGCAAGTAA
Upstream 100 bases:
>100_bases AGCCACGCATTTATCGAAAAAAGTTCTGAGTTCGATTTATAAAATCGGCGTTTTATAGTATAAGCATCGTCAATTTCATA CACTGCTCGACGGAACCAAC
Downstream 100 bases:
>100_bases ACGCTTTAATCAGCGTTATGAGTAATAAAATAGATAGGGACTTTTGCCGTGACGTTTTTGTACGTCAGGAATAGCCCCTT TTCTCTCCCCAATTCTAGTT
Product: SecC motif-containing protein
Products: NA
Alternate protein names: SEC-C Motif Domain-Containing Protein; SEC-C Motif Domain Protein; Preprotein Translocase Subunit-Like Protein; ATPase
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MSDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLFANIEVNADVAEDILELEGLL NKPKTTTFEKKPNRNEPCACGSGQKFKKCCGK
Sequences:
>Translated_112_residues MSDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLFANIEVNADVAEDILELEGLL NKPKTTTFEKKPNRNEPCACGSGQKFKKCCGK >Mature_111_residues SDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLFANIEVNADVAEDILELEGLLN KPKTTTFEKKPNRNEPCACGSGQKFKKCCGK
Specific function: Unknown
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12451; Mature: 12320
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLF CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEHEEEEECCCEE ANIEVNADVAEDILELEGLLNKPKTTTFEKKPNRNEPCACGSGQKFKKCCGK EEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure SDKFFFKGRKTPKPKHESFGYNTKRAAKPGTEALPLQLIVADETRKLEVAAIVAEHQLF CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEHEEEEECCCEE ANIEVNADVAEDILELEGLLNKPKTTTFEKKPNRNEPCACGSGQKFKKCCGK EEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA