| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is leuS [H]
Identifier: 126175469
GI number: 126175469
Start: 3830549
End: 3833173
Strand: Direct
Name: leuS [H]
Synonym: Sbal_3269
Alternate gene names: 126175469
Gene position: 3830549-3833173 (Clockwise)
Preceding gene: 126175467
Following gene: 126175470
Centisome position: 74.71
GC content: 48.34
Gene sequence:
>2625_bases ATGGCGTTAGATCAAATAATAGGCGGCACTGCCGGAAATAGAGTGATGCAAGAGCAATATAATCCCTCAGAAATTGAAGC CTTAGTGCAAAAGCACTGGCATGACAACAAAACCTTCGAAGTCACTGAAGACGCAAACAAAGAAAAGTTTTATTGCCTTT CGATGTTTCCGTACCCTTCTGGCAGACTCCACATGGGACACGTACGCAACTATACCATAGGTGACGTAGTTGCACGCTTT CAACGTCTTCAAGGCAAAAACGTGCTCCAGCCTATCGGTTGGGACTCATTTGGTCTGCCCGCAGAAAATGCCGCGATTAA CAACAAGACTGCGCCTGCGCCATGGACCTATGAAAACATAGAGTACATGAAGAACCAGCTGAAACTGCTGGGTTTTGGTT ACGATTGGAGCCGTGAAATCGCCACTTGTACCCCAGAATATTATCGCTGGGAACAATGGTTCTTCACTAAGTTGTACGAG AAAGGCCTAGTCTACAAAAAGACAGCCTCGGTCAACTGGTGTCCAAACGATGAAACTGTACTGGCGAACGAGCAAGTTCA AGACGGTTGCTGCTGGCGCTGTGATACCCCTGTGGAACAAAAAGAAATTCCACAGTGGTTCATTAAGATCACTGCCTATG CAGAAGAATTATTAAACGATATCGATACCTTAGATGGTTGGCCTGATCAGGTCAAAACCATGCAACGTAACTGGATTGGT CGCAGCGAAGGTGTAGAAATGACCTTCGGCGTCGCAGGCCACGATAAAAGCTTCGATATCTATACCACGCGTCCTGATAC CTTAATGGGCGTGACTTATGTGGCGATTGCTGCAGGTCATCCATTGGCTGAAATCGCCGCGCACACCAATCCTGAGCTTG CCGCCTTTATCGATGAGTGCAAAAACAGCACAACATCAGAAGCCGAACTCGCGACCATGGAAAAACGCGGTGTCGCGACA GGGCTTTTCGCCATTCATCCTATTACTGGTAAGCAAGTCCCAATTTGGGCAGCTAACTTTGTGTTGATGAACTATGGCAC AGGCGCTGTGATGTCAGTTCCAGGCCACGATCAACGTGACTTCGAATTTGCGAAAAAATACGGCCTGGCGATTGAAGCTG TGATCAAGCCAGTTGATGGCGACGTTGATATCAGCGAAGCCGCATATACCGAAAAAGGCGTACTGTTTAACTCGGGAGAG TTTGACGGTTTAGACTTTGAAGCGGGCTTTAATGCCATCGCTAACAAGTTAGTCGCCGAAGGTAAAGGCAAGCGCCAAGT CAACTATCGCCTGCGCGATTGGGGTGTTTCACGTCAGCGTTACTGGGGTGCACCAATCCCTATGGTGACCTTAGCCGATG GCACTGTGATCCCAACGCCAGCAGATCAACTGCCAGTATTACTGCCAGAAGATGTGGTGATGGACGGGATTCAAAGCCCA ATCAAGGCCGATAAAGAATGGGCGAAAACCCAAGTCAACGGTCAAGATGCGCTACGCGAAACCGATACCTTCGATACCTT TATGGAATCGTCTTGGTATTACGCCCGTTACTGCAGCCCGCATGCAGACGAAATGTTAGATCCAGCTAAAGCCAACTACT GGCTACCTGTGGATCAATACATTGGCGGTATCGAACACGCTTGTATGCATTTGTTATATTTCCGCTTCTTCCATAAATTA CTGCGTGATGCAGGTCTGGTTAACTCTAACGAGCCAGCCAAACAACTGCTGACCCAAGGTATGGTGTTGGCCGACGCTTT CTACTACATCAACGAAAAAGGCGCCCGTGTATGGGTGTCTCCTCTAGATGTAGCGACCACAGAAAAAGACGACAAGGGCC GTATTACTAAGGCTATCGACAAAGACGGCAACGAGCTGGTTTATACTGGCATGAGCAAGATGTCTAAGTCGAAAAACAAC GGTATCGATCCTCAAGTCATGGTCGAAAAATACGGCGCCGATACCGTTCGCCTATTTATGATGTTCGCCTCACCACCAGA ATTAACTCTGGAATGGCAAGAGTCTGGCGTTGAAGGCGCACACCGCTTCATTAAACGTCTGTGGAAACTGGCAAACGAGC ATGTGAACCAAGATAACAGCGAAGCCTTAGATGTCAGCACGTTAACAAGTGACCAAAAAGCGCTGCGCCGTGAAGTCCAC AAGACTATCGCTAAAGTGACCGACGATATCGGCCGCCGTCAGATGTTTAACACTGCGGTTGCCGCCGTGATGGAACTGAT GAACCATCTGCAAAAAGCGCCACAAACCACAGGTCAAGACAACGCCATTATCGGCGAAGCCTTATCAGCCATAGTGCGTT TGCTGTACCCTATCATTCCGCATGTTAGCTTTAACCTGTGGAACGAATTAGGCAATGCTAGCAACATCGAAGATAGCCAA TGGCCAGTCGTTGATGAAGCGGCGCTCGTTGAAGACAGCAAGCTCATCGTTGTGCAAGTTAACGGTAAAGTTCGCGCAAA AATCACAGTGGCTGCCGATGCTGATAAAGAATCAGTAGAAGCCTTAGGCATGAGTGATGAGCACGTGATCAAATACCTAG ACGGCCTGACTGTGCGTAAAGTGATCTATGTGCCGGGTAAACTGCTTAGCATAGTGGCCAATTAA
Upstream 100 bases:
>100_bases TAACACGTTACTTCTATCATTCATAACCAATACTCCTTCATACGAACCTTTTTAATGCATCGCTTCTAGTTTATTCTATG CAGATCTTACTCGCGCTGAT
Downstream 100 bases:
>100_bases CCGCTGCTAATAACTAGCTATACCCTAAGTTATTGAAGTGGCAGCAAGGCGGCAATTAACAACAGCCCATGAGCTTAAGT TTTCTAAGTGATTGGGTTAC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 874; Mature: 873
Protein sequence:
>874_residues MALDQIIGGTAGNRVMQEQYNPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF QRLQGKNVLQPIGWDSFGLPAENAAINNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYE KGLVYKKTASVNWCPNDETVLANEQVQDGCCWRCDTPVEQKEIPQWFIKITAYAEELLNDIDTLDGWPDQVKTMQRNWIG RSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAGHPLAEIAAHTNPELAAFIDECKNSTTSEAELATMEKRGVAT GLFAIHPITGKQVPIWAANFVLMNYGTGAVMSVPGHDQRDFEFAKKYGLAIEAVIKPVDGDVDISEAAYTEKGVLFNSGE FDGLDFEAGFNAIANKLVAEGKGKRQVNYRLRDWGVSRQRYWGAPIPMVTLADGTVIPTPADQLPVLLPEDVVMDGIQSP IKADKEWAKTQVNGQDALRETDTFDTFMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKL LRDAGLVNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNELVYTGMSKMSKSKNN GIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHRFIKRLWKLANEHVNQDNSEALDVSTLTSDQKALRREVH KTIAKVTDDIGRRQMFNTAVAAVMELMNHLQKAPQTTGQDNAIIGEALSAIVRLLYPIIPHVSFNLWNELGNASNIEDSQ WPVVDEAALVEDSKLIVVQVNGKVRAKITVAADADKESVEALGMSDEHVIKYLDGLTVRKVIYVPGKLLSIVAN
Sequences:
>Translated_874_residues MALDQIIGGTAGNRVMQEQYNPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF QRLQGKNVLQPIGWDSFGLPAENAAINNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYE KGLVYKKTASVNWCPNDETVLANEQVQDGCCWRCDTPVEQKEIPQWFIKITAYAEELLNDIDTLDGWPDQVKTMQRNWIG RSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAGHPLAEIAAHTNPELAAFIDECKNSTTSEAELATMEKRGVAT GLFAIHPITGKQVPIWAANFVLMNYGTGAVMSVPGHDQRDFEFAKKYGLAIEAVIKPVDGDVDISEAAYTEKGVLFNSGE FDGLDFEAGFNAIANKLVAEGKGKRQVNYRLRDWGVSRQRYWGAPIPMVTLADGTVIPTPADQLPVLLPEDVVMDGIQSP IKADKEWAKTQVNGQDALRETDTFDTFMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKL LRDAGLVNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNELVYTGMSKMSKSKNN GIDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHRFIKRLWKLANEHVNQDNSEALDVSTLTSDQKALRREVH KTIAKVTDDIGRRQMFNTAVAAVMELMNHLQKAPQTTGQDNAIIGEALSAIVRLLYPIIPHVSFNLWNELGNASNIEDSQ WPVVDEAALVEDSKLIVVQVNGKVRAKITVAADADKESVEALGMSDEHVIKYLDGLTVRKVIYVPGKLLSIVAN >Mature_873_residues ALDQIIGGTAGNRVMQEQYNPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQ RLQGKNVLQPIGWDSFGLPAENAAINNKTAPAPWTYENIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEK GLVYKKTASVNWCPNDETVLANEQVQDGCCWRCDTPVEQKEIPQWFIKITAYAEELLNDIDTLDGWPDQVKTMQRNWIGR SEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAGHPLAEIAAHTNPELAAFIDECKNSTTSEAELATMEKRGVATG LFAIHPITGKQVPIWAANFVLMNYGTGAVMSVPGHDQRDFEFAKKYGLAIEAVIKPVDGDVDISEAAYTEKGVLFNSGEF DGLDFEAGFNAIANKLVAEGKGKRQVNYRLRDWGVSRQRYWGAPIPMVTLADGTVIPTPADQLPVLLPEDVVMDGIQSPI KADKEWAKTQVNGQDALRETDTFDTFMESSWYYARYCSPHADEMLDPAKANYWLPVDQYIGGIEHACMHLLYFRFFHKLL RDAGLVNSNEPAKQLLTQGMVLADAFYYINEKGARVWVSPLDVATTEKDDKGRITKAIDKDGNELVYTGMSKMSKSKNNG IDPQVMVEKYGADTVRLFMMFASPPELTLEWQESGVEGAHRFIKRLWKLANEHVNQDNSEALDVSTLTSDQKALRREVHK TIAKVTDDIGRRQMFNTAVAAVMELMNHLQKAPQTTGQDNAIIGEALSAIVRLLYPIIPHVSFNLWNELGNASNIEDSQW PVVDEAALVEDSKLIVVQVNGKVRAKITVAADADKESVEALGMSDEHVIKYLDGLTVRKVIYVPGKLLSIVAN
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=879, Percent_Identity=35.4948805460751, Blast_Score=511, Evalue=1e-144, Organism=Escherichia coli, GI1786861, Length=859, Percent_Identity=74.7380675203725, Blast_Score=1363, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=400, Percent_Identity=25.25, Blast_Score=119, Evalue=6e-28, Organism=Caenorhabditis elegans, GI71997510, Length=808, Percent_Identity=31.3118811881188, Blast_Score=379, Evalue=1e-105, Organism=Caenorhabditis elegans, GI71997517, Length=803, Percent_Identity=31.2577833125778, Blast_Score=378, Evalue=1e-105, Organism=Caenorhabditis elegans, GI212645227, Length=374, Percent_Identity=27.807486631016, Blast_Score=147, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17554638, Length=83, Percent_Identity=42.1686746987952, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71980946, Length=187, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6323414, Length=813, Percent_Identity=37.0233702337023, Blast_Score=508, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6321531, Length=374, Percent_Identity=26.4705882352941, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6325217, Length=378, Percent_Identity=23.015873015873, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI21355409, Length=875, Percent_Identity=32, Blast_Score=436, Evalue=1e-122, Organism=Drosophila melanogaster, GI281366294, Length=326, Percent_Identity=24.8466257668712, Blast_Score=77, Evalue=5e-14,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 98104; Mature: 97973
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALDQIIGGTAGNRVMQEQYNPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPS CCHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCC GRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAINNKTAPAPWTYENI CCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH EYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYKKTASVNWCPNDETV HHHHHHHEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCEE LANEQVQDGCCWRCDTPVEQKEIPQWFIKITAYAEELLNDIDTLDGWPDQVKTMQRNWIG EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC RSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAGHPLAEIAAHTNPELAAFIDEC CCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHH KNSTTSEAELATMEKRGVATGLFAIHPITGKQVPIWAANFVLMNYGTGAVMSVPGHDQRD CCCCCCHHHHHHHHHCCCEECEEEEECCCCCCCCEEEEEEEEEECCCCEEEECCCCCCHH FEFAKKYGLAIEAVIKPVDGDVDISEAAYTEKGVLFNSGEFDGLDFEAGFNAIANKLVAE HHHHHHHCCEEEEEEECCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHC GKGKRQVNYRLRDWGVSRQRYWGAPIPMVTLADGTVIPTPADQLPVLLPEDVVMDGIQSP CCCCCEEEEEHHHCCCCCHHCCCCCCCEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHH IKADKEWAKTQVNGQDALRETDTFDTFMESSWYYARYCSPHADEMLDPAKANYWLPVDQY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCEEEEHHHH IGGIEHACMHLLYFRFFHKLLRDAGLVNSNEPAKQLLTQGMVLADAFYYINEKGARVWVS HCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHEEECCCCEEEEC PLDVATTEKDDKGRITKAIDKDGNELVYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFM CCCCCCCCCCCCCCHHHHHCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHCCCCEEEEEE MFASPPELTLEWQESGVEGAHRFIKRLWKLANEHVNQDNSEALDVSTLTSDQKALRREVH EECCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHH KTIAKVTDDIGRRQMFNTAVAAVMELMNHLQKAPQTTGQDNAIIGEALSAIVRLLYPIIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC HVSFNLWNELGNASNIEDSQWPVVDEAALVEDSKLIVVQVNGKVRAKITVAADADKESVE CCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEEEEEEEEECCCHHHHH ALGMSDEHVIKYLDGLTVRKVIYVPGKLLSIVAN HCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHCC >Mature Secondary Structure ALDQIIGGTAGNRVMQEQYNPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPS CHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCC GRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAINNKTAPAPWTYENI CCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH EYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYKKTASVNWCPNDETV HHHHHHHEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCEEEECCCCEECCCCCEE LANEQVQDGCCWRCDTPVEQKEIPQWFIKITAYAEELLNDIDTLDGWPDQVKTMQRNWIG EECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC RSEGVEMTFGVAGHDKSFDIYTTRPDTLMGVTYVAIAAGHPLAEIAAHTNPELAAFIDEC CCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHH KNSTTSEAELATMEKRGVATGLFAIHPITGKQVPIWAANFVLMNYGTGAVMSVPGHDQRD CCCCCCHHHHHHHHHCCCEECEEEEECCCCCCCCEEEEEEEEEECCCCEEEECCCCCCHH FEFAKKYGLAIEAVIKPVDGDVDISEAAYTEKGVLFNSGEFDGLDFEAGFNAIANKLVAE HHHHHHHCCEEEEEEECCCCCCCCHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHC GKGKRQVNYRLRDWGVSRQRYWGAPIPMVTLADGTVIPTPADQLPVLLPEDVVMDGIQSP CCCCCEEEEEHHHCCCCCHHCCCCCCCEEEECCCEECCCCCCCCCCCCCHHHHHHHHHHH IKADKEWAKTQVNGQDALRETDTFDTFMESSWYYARYCSPHADEMLDPAKANYWLPVDQY HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCCCCCEEEEHHHH IGGIEHACMHLLYFRFFHKLLRDAGLVNSNEPAKQLLTQGMVLADAFYYINEKGARVWVS HCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHEEECCCCEEEEC PLDVATTEKDDKGRITKAIDKDGNELVYTGMSKMSKSKNNGIDPQVMVEKYGADTVRLFM CCCCCCCCCCCCCCHHHHHCCCCCEEEEECHHHHHHCCCCCCCHHHHHHHCCCCEEEEEE MFASPPELTLEWQESGVEGAHRFIKRLWKLANEHVNQDNSEALDVSTLTSDQKALRREVH EECCCCCEEEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHHHHHH KTIAKVTDDIGRRQMFNTAVAAVMELMNHLQKAPQTTGQDNAIIGEALSAIVRLLYPIIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC HVSFNLWNELGNASNIEDSQWPVVDEAALVEDSKLIVVQVNGKVRAKITVAADADKESVE CCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEEEEEEEEECCCHHHHH ALGMSDEHVIKYLDGLTVRKVIYVPGKLLSIVAN HCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA