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The map label for this gene is lptE [H]

Identifier: 126175470

GI number: 126175470

Start: 3833343

End: 3833837

Strand: Direct

Name: lptE [H]

Synonym: Sbal_3270

Alternate gene names: 126175470

Gene position: 3833343-3833837 (Clockwise)

Preceding gene: 126175469

Following gene: 126175471

Centisome position: 74.76

GC content: 49.09

Gene sequence:

>495_bases
ATGCTAATCAAACGCATATGCTTCGCAATCATGGCGCTAGTGATGATGACCAGCGCCGGTTGCGGTTTTAAGCTTCAACG
CAGTTATCAGATCCCCGATGTTCTCAATCATTTGAGTTTGAGCAGCGCGGATGAATACAGCGAACTCACCCGTTTGGTGC
GTGAACGCCTGCGCTTGAACAATATCCAAGTTGTCGACGCCGCCGATGACGTTCCAGTATTAAGGTTAATCACCGACTCT
CTAGAACGCTCGACCTTATCTTTGTACCCCACAGGTAACGTCGCCGAGTATGAGCTGATTTATTTAGTCGAATTTGCTGT
GGCACTGCCGGGCAAAGAAGCGCAGCCTTTCAAGGTTGAAATTCGCCGCGACTACTTAGACGATCCACGTACCGCATTGG
CAAAGAGTCGTGAAATGGAATTGCTGACGAAGGAAATGCGTATCCAAGCTGCGGATCGTATTCTGCAAGCGATGGCCAGT
ACTGAGGTGAATTAA

Upstream 100 bases:

>100_bases
TGAGCTTAAGTTTTCTAAGTGATTGGGTTACTTGAAAGCCGCCAACAAAGCTGCCGCTTCAAGCCAGCAGGTATACAACG
AATAGGAAACCGCGAAATCT

Downstream 100 bases:

>100_bases
TGCGGGTCATCAATTAAATGCGGATAATCTACTAAATGCGGATAATCAACTAAATGAGAGTCTATCCCGATCAACTCTCC
CGCCACCTCAACCAGTTATT

Product: rare lipoprotein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MLIKRICFAIMALVMMTSAGCGFKLQRSYQIPDVLNHLSLSSADEYSELTRLVRERLRLNNIQVVDAADDVPVLRLITDS
LERSTLSLYPTGNVAEYELIYLVEFAVALPGKEAQPFKVEIRRDYLDDPRTALAKSREMELLTKEMRIQAADRILQAMAS
TEVN

Sequences:

>Translated_164_residues
MLIKRICFAIMALVMMTSAGCGFKLQRSYQIPDVLNHLSLSSADEYSELTRLVRERLRLNNIQVVDAADDVPVLRLITDS
LERSTLSLYPTGNVAEYELIYLVEFAVALPGKEAQPFKVEIRRDYLDDPRTALAKSREMELLTKEMRIQAADRILQAMAS
TEVN
>Mature_164_residues
MLIKRICFAIMALVMMTSAGCGFKLQRSYQIPDVLNHLSLSSADEYSELTRLVRERLRLNNIQVVDAADDVPVLRLITDS
LERSTLSLYPTGNVAEYELIYLVEFAVALPGKEAQPFKVEIRRDYLDDPRTALAKSREMELLTKEMRIQAADRILQAMAS
TEVN

Specific function: Together with lptD, is involved in the assembly of LPS in the outer leaflet of the outer membrane [H]

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptE lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786860, Length=154, Percent_Identity=34.4155844155844, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007485 [H]

Pfam domain/function: PF04390 RplB [H]

EC number: NA

Molecular weight: Translated: 18611; Mature: 18611

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKRICFAIMALVMMTSAGCGFKLQRSYQIPDVLNHLSLSSADEYSELTRLVRERLRLN
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
NIQVVDAADDVPVLRLITDSLERSTLSLYPTGNVAEYELIYLVEFAVALPGKEAQPFKVE
CEEEEECCCCCHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
IRRDYLDDPRTALAKSREMELLTKEMRIQAADRILQAMASTEVN
EEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLIKRICFAIMALVMMTSAGCGFKLQRSYQIPDVLNHLSLSSADEYSELTRLVRERLRLN
CHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
NIQVVDAADDVPVLRLITDSLERSTLSLYPTGNVAEYELIYLVEFAVALPGKEAQPFKVE
CEEEEECCCCCHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
IRRDYLDDPRTALAKSREMELLTKEMRIQAADRILQAMASTEVN
EEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA