| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is ybeL [H]
Identifier: 126175468
GI number: 126175468
Start: 3829972
End: 3830472
Strand: Reverse
Name: ybeL [H]
Synonym: Sbal_3268
Alternate gene names: 126175468
Gene position: 3830472-3829972 (Counterclockwise)
Preceding gene: 126175483
Following gene: 126175459
Centisome position: 74.71
GC content: 41.92
Gene sequence:
>501_bases ATGAATGATAGAAGTAACGTGTTACTAGGACTGTATCAAGCCTTAATTACCGAAGTGAAAGCTCAATTTGCAGAAGATAA CACGCTGACTGTAAAGAACTTATTTAACTCTGTCACTCAAGGTAAGGAGTTTTTACGTCTTAAACAACAGGCTGGAGAAG ATGAGCTCGCTTTAGTAGAACAATTCTTAAAACGTGATATTACCAGTTTTCTTCGCGAGCAGAACGCCGATAGTCTGAGC CACAGCCAAACTGTGATTACTTTGGAGAATACGCTTTGGCATTGGTTGGGTGAAATAACCGATCGCAGCCAAGTGGAATG GCATGAATTAACGCAAGATTTTAAGCAAAATGGTTATTACAAAAGTGGCGACATAGTAAGTCAGGGCATCATGGTATGCA CTAACTGTGGCAATGAAATGAGTATTGAATTTCCGAGTCCCATCCCTGATTGCCCTGAGTGTGATCACGAAGAATTTACC CGCGAGCCGCTAACGCCTTAG
Upstream 100 bases:
>100_bases GCCTATTATTTGATCTAACGCCATATCAGCGCGAGTAAGATCTGCATAGAATAAACTAGAAGCGATGCATTAAAAAGGTT CGTATGAAGGAGTATTGGTT
Downstream 100 bases:
>100_bases TCGCGTTAACGATCTTATTTCGTTAAAACGACGCATCTGCGTCGTTTTTTTTGATCAATTAAACCGAAATCACCGCTATC TTGGTTAATCAGACAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNDRSNVLLGLYQALITEVKAQFAEDNTLTVKNLFNSVTQGKEFLRLKQQAGEDELALVEQFLKRDITSFLREQNADSLS HSQTVITLENTLWHWLGEITDRSQVEWHELTQDFKQNGYYKSGDIVSQGIMVCTNCGNEMSIEFPSPIPDCPECDHEEFT REPLTP
Sequences:
>Translated_166_residues MNDRSNVLLGLYQALITEVKAQFAEDNTLTVKNLFNSVTQGKEFLRLKQQAGEDELALVEQFLKRDITSFLREQNADSLS HSQTVITLENTLWHWLGEITDRSQVEWHELTQDFKQNGYYKSGDIVSQGIMVCTNCGNEMSIEFPSPIPDCPECDHEEFT REPLTP >Mature_166_residues MNDRSNVLLGLYQALITEVKAQFAEDNTLTVKNLFNSVTQGKEFLRLKQQAGEDELALVEQFLKRDITSFLREQNADSLS HSQTVITLENTLWHWLGEITDRSQVEWHELTQDFKQNGYYKSGDIVSQGIMVCTNCGNEMSIEFPSPIPDCPECDHEEFT REPLTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786863, Length=106, Percent_Identity=34.9056603773585, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009912 [H]
Pfam domain/function: PF07295 DUF1451 [H]
EC number: NA
Molecular weight: Translated: 19029; Mature: 19029
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRSNVLLGLYQALITEVKAQFAEDNTLTVKNLFNSVTQGKEFLRLKQQAGEDELALVE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QFLKRDITSFLREQNADSLSHSQTVITLENTLWHWLGEITDRSQVEWHELTQDFKQNGYY HHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC KSGDIVSQGIMVCTNCGNEMSIEFPSPIPDCPECDHEEFTREPLTP CCCCHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MNDRSNVLLGLYQALITEVKAQFAEDNTLTVKNLFNSVTQGKEFLRLKQQAGEDELALVE CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QFLKRDITSFLREQNADSLSHSQTVITLENTLWHWLGEITDRSQVEWHELTQDFKQNGYY HHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC KSGDIVSQGIMVCTNCGNEMSIEFPSPIPDCPECDHEEFTREPLTP CCCCHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]