Click here to switch to the map view.

The map label for this gene is yhaM [C]

Identifier: 126175271

GI number: 126175271

Start: 3590707

End: 3591981

Strand: Direct

Name: yhaM [C]

Synonym: Sbal_3070

Alternate gene names: 126175271

Gene position: 3590707-3591981 (Clockwise)

Preceding gene: 126175270

Following gene: 126175272

Centisome position: 70.03

GC content: 51.37

Gene sequence:

>1275_bases
ATGAAACCCCAATGGCAGCAGTATATTAACATCATCAAACAAGTCGTTAAGCCCGCATTAGGCTGCACTGAGCCCATCGC
CGCCGCTTACGCCGCCGCAGTCGCTCGCGCCTTACTGGGTGTTGAGCCCGATTCAATTGCGGTACAAGTGTCTGACAATC
TTTATAAAAACTCTATGGGTGTGTTTGTGCCTGGTACAGGCAAAATCGGTCTGGCAATTGCCGCAGCGGCAGGCGCCATT
GCGGGTAATCCTGATGCGGGCTTAGAAGTATTGGCAGTGATCACGCCGGAGCAAGTCGCCAAAGCACAGGCACTGATCGA
TGCGGGTAAAGTCACAGTCGAGCGCACTGAAACGGCAGAATTTATCTATTGCTGTGTTATCGCAAAAAAAGGCGACCGCG
AAGCCCTAGTGAAAATCTGTGGTGGCCATACGCTTATTGCCGAAAAGCGCCTCAACGGCGAATCCGTCTTCAGTGTCGAT
AGCACGCAAGCTAAAGCCACGGGTTCCATCTGTGAAGGCGTGGATATCACTATCGAGTCCATTTATCGCTTCGCCCAAGA
AGTCCCCTTCGAAGAGATCAAGTTCATCCTCGAAGCCTCTGAGCTGAACGGCAAATTATCCGATGAAGGCATGGCGAATC
CCTATGGACTCGAAGTCGGTCGCACCATGAAAAGCGGCATAGCCGCCGGCATTATTGGTGAAGATTTACTCAATAAAATC
GTGATGTTAACGGCTGCAGCCTCAGATGCGCGCATGGGCGGTGCTAATTTGCCCGCCATGAGTAATCTTGGCAGTGGCAA
CCAAGGCATCGCCGCGACTATTCCCGTGGTATTAACGGCGCAATGCTATAAGGTTTCGGAAGAACAACTCGCCCGCGCGT
TGATCATGAGCCATCTCGGGGCGATTTATATCAAGTCCCATTACCCACCGCTGTCGGCATTTTGTGGCAATACAGTCACC
AGCGCCGCCGCGTCTATGGCAATGGTGTATTTGGCGGGAGGTTCGTTCGAACAATCCTGTTTCGCGATTCAAAACGTGAT
CAGCGATAGCTCGGGCATGGTGTGTGACGGCGCTAAAGCCTCCTGCGCCATGAAGGTCAGCACGTCATCCAGTGCGGCCG
TGCGCTCATTTTTGATGGCGCTCAGTAGTCACAATGTCTCCGGCCAAGGTATTATTGCAACCGATGTTGAAAAAACCATT
AAAAACATTGGCAAAATGATCCTCAATGGCATGTCATCCACAGATGTCACTATTATCGATATTATGTCGGCATAA

Upstream 100 bases:

>100_bases
TAGCTGTTTTGCGGTGAAGGATCTTCCACTGGGCGTTAAAGTGGAAGTTGAAGCGATAGCACACGTGAAAATTTAAGTAT
TAACAAAAGGTTGTAAGCTG

Downstream 100 bases:

>100_bases
TGATTTTAACCCGCTGAATAATGGCGGGTTAATAACCAAAGGTTGAAATTGTGAAACTGCAAGATTTAACGCAAAGTGAT
CTGGACATTCTGAAATCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKPQWQQYINIIKQVVKPALGCTEPIAAAYAAAVARALLGVEPDSIAVQVSDNLYKNSMGVFVPGTGKIGLAIAAAAGAI
AGNPDAGLEVLAVITPEQVAKAQALIDAGKVTVERTETAEFIYCCVIAKKGDREALVKICGGHTLIAEKRLNGESVFSVD
STQAKATGSICEGVDITIESIYRFAQEVPFEEIKFILEASELNGKLSDEGMANPYGLEVGRTMKSGIAAGIIGEDLLNKI
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVLTAQCYKVSEEQLARALIMSHLGAIYIKSHYPPLSAFCGNTVT
SAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKASCAMKVSTSSSAAVRSFLMALSSHNVSGQGIIATDVEKTI
KNIGKMILNGMSSTDVTIIDIMSA

Sequences:

>Translated_424_residues
MKPQWQQYINIIKQVVKPALGCTEPIAAAYAAAVARALLGVEPDSIAVQVSDNLYKNSMGVFVPGTGKIGLAIAAAAGAI
AGNPDAGLEVLAVITPEQVAKAQALIDAGKVTVERTETAEFIYCCVIAKKGDREALVKICGGHTLIAEKRLNGESVFSVD
STQAKATGSICEGVDITIESIYRFAQEVPFEEIKFILEASELNGKLSDEGMANPYGLEVGRTMKSGIAAGIIGEDLLNKI
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVLTAQCYKVSEEQLARALIMSHLGAIYIKSHYPPLSAFCGNTVT
SAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKASCAMKVSTSSSAAVRSFLMALSSHNVSGQGIIATDVEKTI
KNIGKMILNGMSSTDVTIIDIMSA
>Mature_424_residues
MKPQWQQYINIIKQVVKPALGCTEPIAAAYAAAVARALLGVEPDSIAVQVSDNLYKNSMGVFVPGTGKIGLAIAAAAGAI
AGNPDAGLEVLAVITPEQVAKAQALIDAGKVTVERTETAEFIYCCVIAKKGDREALVKICGGHTLIAEKRLNGESVFSVD
STQAKATGSICEGVDITIESIYRFAQEVPFEEIKFILEASELNGKLSDEGMANPYGLEVGRTMKSGIAAGIIGEDLLNKI
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVLTAQCYKVSEEQLARALIMSHLGAIYIKSHYPPLSAFCGNTVT
SAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKASCAMKVSTSSSAAVRSFLMALSSHNVSGQGIIATDVEKTI
KNIGKMILNGMSSTDVTIIDIMSA

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=428, Percent_Identity=47.196261682243, Blast_Score=344, Evalue=5e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 43991; Mature: 43991

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPQWQQYINIIKQVVKPALGCTEPIAAAYAAAVARALLGVEPDSIAVQVSDNLYKNSMG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCC
VFVPGTGKIGLAIAAAAGAIAGNPDAGLEVLAVITPEQVAKAQALIDAGKVTVERTETAE
EEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCE
FIYCCVIAKKGDREALVKICGGHTLIAEKRLNGESVFSVDSTQAKATGSICEGVDITIES
EEEEEEEECCCCHHHHHHHHCCCEEEEECCCCCCEEEEECCCCHHHCCCHHCCCCHHHHH
IYRFAQEVPFEEIKFILEASELNGKLSDEGMANPYGLEVGRTMKSGIAAGIIGEDLLNKI
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVLTAQCYKVSEEQLARALIMSHLG
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHC
AIYIKSHYPPLSAFCGNTVTSAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKA
EEEEECCCCCHHHHHCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCC
SCAMKVSTSSSAAVRSFLMALSSHNVSGQGIIATDVEKTIKNIGKMILNGMSSTDVTIID
CEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEE
IMSA
EECC
>Mature Secondary Structure
MKPQWQQYINIIKQVVKPALGCTEPIAAAYAAAVARALLGVEPDSIAVQVSDNLYKNSMG
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCC
VFVPGTGKIGLAIAAAAGAIAGNPDAGLEVLAVITPEQVAKAQALIDAGKVTVERTETAE
EEECCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCE
FIYCCVIAKKGDREALVKICGGHTLIAEKRLNGESVFSVDSTQAKATGSICEGVDITIES
EEEEEEEECCCCHHHHHHHHCCCEEEEECCCCCCEEEEECCCCHHHCCCHHCCCCHHHHH
IYRFAQEVPFEEIKFILEASELNGKLSDEGMANPYGLEVGRTMKSGIAAGIIGEDLLNKI
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVLTAQCYKVSEEQLARALIMSHLG
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHC
AIYIKSHYPPLSAFCGNTVTSAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKA
EEEEECCCCCHHHHHCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCC
SCAMKVSTSSSAAVRSFLMALSSHNVSGQGIIATDVEKTIKNIGKMILNGMSSTDVTIID
CEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEE
IMSA
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA