| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yheO [H]
Identifier: 126175272
GI number: 126175272
Start: 3592032
End: 3592691
Strand: Direct
Name: yheO [H]
Synonym: Sbal_3071
Alternate gene names: 126175272
Gene position: 3592032-3592691 (Clockwise)
Preceding gene: 126175271
Following gene: 126175275
Centisome position: 70.06
GC content: 47.27
Gene sequence:
>660_bases GTGAAACTGCAAGATTTAACGCAAAGTGATCTGGACATTCTGAAATCGGTCGAAAATATCGTCGATGGCATCGCGGCTAT GTATGGTCAGCACACAGAAGTGGTATTGCACAGCCTAGATGCGAAACATCCGTCTGTGGTCAAAATTGCCAATGGCCATG TCACAGGTCGAGAAGTGGGTGCGCCGATAACCAACCTTGCCTTGCTTAAACTCAAGACAGGTCAGGATATTTCTAACTCT TACCTAACTAAATGCGCCAATGGTAAGACGCTGAGATCGATCACAACAGTTATCCGCAACAGTAAAAATCAGCCCATAGG TTTGCTGTGCATTAACAGCGACATGGATGCGCCGCTGCAATCTGTGCTGCGCACTATGATGCCGGATAACCTCTTCAGCA CTGAAGTGACCAGCTCACCAGAGATTTTTGCCCGCAATATCGATGAAGCGCTGCATAGCACGATTGACAGTATCAACCAT GAAGTGCGCTCCAACCCTGGGATTTCCCCTTCACAGAAGAGCCGTGAAATCGTCAATCAATTGCATGAGTTAGGTATTTT TGAGCTCAAGGACAGCGCCCAAGTGGCCGCTACTCGTTTAGGGATTTCGGTGCATTCGATTTATCGTTACCTGCGGGAAA TTAAAGCCAATCAAGCTTAA
Upstream 100 bases:
>100_bases ATGGCATGTCATCCACAGATGTCACTATTATCGATATTATGTCGGCATAATGATTTTAACCCGCTGAATAATGGCGGGTT AATAACCAAAGGTTGAAATT
Downstream 100 bases:
>100_bases AGCAAGAAAAACTCGCCTAAATAGAAAGGGCTAAGGTGTAAATAACCTTAGCCCTTTGGTTTTATTGTTTTTGCGCTTGT TATTCCGTAGATTGTCCGCT
Product: YheO domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MKLQDLTQSDLDILKSVENIVDGIAAMYGQHTEVVLHSLDAKHPSVVKIANGHVTGREVGAPITNLALLKLKTGQDISNS YLTKCANGKTLRSITTVIRNSKNQPIGLLCINSDMDAPLQSVLRTMMPDNLFSTEVTSSPEIFARNIDEALHSTIDSINH EVRSNPGISPSQKSREIVNQLHELGIFELKDSAQVAATRLGISVHSIYRYLREIKANQA
Sequences:
>Translated_219_residues MKLQDLTQSDLDILKSVENIVDGIAAMYGQHTEVVLHSLDAKHPSVVKIANGHVTGREVGAPITNLALLKLKTGQDISNS YLTKCANGKTLRSITTVIRNSKNQPIGLLCINSDMDAPLQSVLRTMMPDNLFSTEVTSSPEIFARNIDEALHSTIDSINH EVRSNPGISPSQKSREIVNQLHELGIFELKDSAQVAATRLGISVHSIYRYLREIKANQA >Mature_219_residues MKLQDLTQSDLDILKSVENIVDGIAAMYGQHTEVVLHSLDAKHPSVVKIANGHVTGREVGAPITNLALLKLKTGQDISNS YLTKCANGKTLRSITTVIRNSKNQPIGLLCINSDMDAPLQSVLRTMMPDNLFSTEVTSSPEIFARNIDEALHSTIDSINH EVRSNPGISPSQKSREIVNQLHELGIFELKDSAQVAATRLGISVHSIYRYLREIKANQA
Specific function: Unknown
COG id: COG2964
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0575 [H]
Homologues:
Organism=Escherichia coli, GI87082246, Length=215, Percent_Identity=41.3953488372093, Blast_Score=167, Evalue=4e-43,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013559 - ProDom: PD037769 [H]
Pfam domain/function: PF08348 PAS_6 [H]
EC number: NA
Molecular weight: Translated: 24007; Mature: 24007
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQDLTQSDLDILKSVENIVDGIAAMYGQHTEVVLHSLDAKHPSVVKIANGHVTGREVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHC APITNLALLKLKTGQDISNSYLTKCANGKTLRSITTVIRNSKNQPIGLLCINSDMDAPLQ CCHHHEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH SVLRTMMPDNLFSTEVTSSPEIFARNIDEALHSTIDSINHEVRSNPGISPSQKSREIVNQ HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LHELGIFELKDSAQVAATRLGISVHSIYRYLREIKANQA HHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKLQDLTQSDLDILKSVENIVDGIAAMYGQHTEVVLHSLDAKHPSVVKIANGHVTGREVG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHC APITNLALLKLKTGQDISNSYLTKCANGKTLRSITTVIRNSKNQPIGLLCINSDMDAPLQ CCHHHEEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH SVLRTMMPDNLFSTEVTSSPEIFARNIDEALHSTIDSINHEVRSNPGISPSQKSREIVNQ HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LHELGIFELKDSAQVAATRLGISVHSIYRYLREIKANQA HHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]