| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175208
Identifier: 126175208
GI number: 126175208
Start: 3531925
End: 3533328
Strand: Direct
Name: 126175208
Synonym: Sbal_3006
Alternate gene names: NA
Gene position: 3531925-3533328 (Clockwise)
Preceding gene: 126175207
Following gene: 126175209
Centisome position: 68.88
GC content: 47.86
Gene sequence:
>1404_bases ATGCCCTGCTACGCAGAGTTTTCATTGGCACAAATCCCACCGCTCACGAACAAAACGCCCATCACCTTAGTCGCAGAAAA AGGATTTTGGACCGACTATTTAACCCAAGAAATGTTGCCTAAATTTACCGAAAAAACTGGCGTCAAAGTGCAAGTGATCA GCACTGAGCTAGACACTATGTTTAACTTACAGACCCAAGATTTACTCCAAGGTTCGGGCAAATACGACTTGCTAACGATG GAAGCTGGCTGGGCAAAAGAATGGGCCGCCAATGGCTACACTGTGCCCTTAGTCGAACTCGCGAAACTGTACGATCCCGA TGGCGAAAAGGCCATGGAGAAATACCTAGAACCCTATTACCCATCGCTACTGAATATTTTATCCTACCATGGTGAAATCC ATGCGATTCCCTACAACAACTATGTGATGGGCAATCATTACCGAGCAGATCTCTTCGATAATAAAACCGAAAAAACACGC TTTCAGAGCCAGTTCGGCTACCCGCTCGCGCCAGCAAAAACCTTAACCGAGTTACGGGATCAAGCCCAGTTCTTCACTCG TAAAGCGGGCGCTATGTTGGCGGATAAAATGTTGACCCACGACTTTTACGGCCTAGCGCTAATGTCGGGCGATAAGCCGC ATATTAACGATGAATTTTCCAGCATGATCTGGAGCTTAGGCGGCGCTTGGATGCAGCCAATTTATAACGACCAAAAACAG ATCAGTCATTTTGAAGTGCCGACCATCAACCATGAAGCCATTGAAACCGCCAAGCTTTATCGCGAATTAATGCCCTATGC CGTACCTGTTAACGAGCAATTTGCCTTCAATGAGGCCGCCAATGCAATCGCTACAGGCCAAGCGGCAATGTGGCCTTTTG CCTACAATAATTTGTGGCACAAATCTTTTAAAGTTGAACAAAATATTCCCGGCGCACGCCTTGCGGTGAGTCAAGTGCCC GGCGGTTATCCCTATAACGGCGCCTATGCTTTTGCCGTGAGCTACGACAGCAAAAATCCCCAAGCGGCCTATTGGCTCAT CAAATACATGGGCACCTATGAGGCGCAACACGCTTATGCCCTCGGCGGCGGTAATCCCTGTCGTATGGATGTCGTGACCG CCCCCGAATTTAAAAGTGAATCGTTAAGGACCATAGCGGGCGCATTCGAGGCAAGCCATATCGCTAATATGTTTTGGTCA ACGAAAGTGCTAGAACTTGGGCATTTTACCAGTACCGCCATGGGACAGATTTACCCTGAACTCAGCCATGCTTGCTATCG CGCTAGCCGCAGGCCCGCTGACAGCGAGGATATTTTCATTAAATTAAGTGCAGAGATAAAACACCTCCAAAATACCTATG GAGAGGTACCTGCTATTGACAAGAAAACCAATGACAAGCACTAA
Upstream 100 bases:
>100_bases AATAAATGATATTTATTCAGGGTTAATACGCAACATTAAGGTGTATTTTTTGTTAAAGCCGATCCGACTTATTTGCCTTT GTTTAAGCGCCGCGTTTCTG
Downstream 100 bases:
>100_bases ACCGCTGAAAAGCCTAAAACAAAAAATAACCTTAGCCTTCTATATCATAGTGGGCATGGCGCTGTTTAATGGTGTCGTCG CCATACTGCTGTCACAGCAA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MPCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTMFNLQTQDLLQGSGKYDLLTM EAGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYYPSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTR FQSQFGYPLAPAKTLTELRDQAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQ ISHFEVPTINHEAIETAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWHKSFKVEQNIPGARLAVSQVP GGYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYALGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWS TKVLELGHFTSTAMGQIYPELSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH
Sequences:
>Translated_467_residues MPCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTMFNLQTQDLLQGSGKYDLLTM EAGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYYPSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTR FQSQFGYPLAPAKTLTELRDQAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQ ISHFEVPTINHEAIETAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWHKSFKVEQNIPGARLAVSQVP GGYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYALGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWS TKVLELGHFTSTAMGQIYPELSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH >Mature_466_residues PCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTMFNLQTQDLLQGSGKYDLLTME AGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYYPSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTRF QSQFGYPLAPAKTLTELRDQAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQI SHFEVPTINHEAIETAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWHKSFKVEQNIPGARLAVSQVPG GYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYALGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWST KVLELGHFTSTAMGQIYPELSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52732; Mature: 52601
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTM CCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHH FNLQTQDLLQGSGKYDLLTMEAGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYY HCCCHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHCCHH PSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTRFQSQFGYPLAPAKTLTELRD HHHHHHHHHCCCEEEEECCCEEECCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH QAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQ HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHH ISHFEVPTINHEAIETAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWH HCEECCCCCCHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHCCCHHCCCHHHHHHHH KSFKVEQNIPGARLAVSQVPGGYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYA HCEEECCCCCCCEEEHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEE LGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWSTKVLELGHFTSTAMGQIYPE ECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH HHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PCYAEFSLAQIPPLTNKTPITLVAEKGFWTDYLTQEMLPKFTEKTGVKVQVISTELDTM CCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHHH FNLQTQDLLQGSGKYDLLTMEAGWAKEWAANGYTVPLVELAKLYDPDGEKAMEKYLEPYY HCCCHHHHHCCCCCEEEEEECCCCCHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHCCHH PSLLNILSYHGEIHAIPYNNYVMGNHYRADLFDNKTEKTRFQSQFGYPLAPAKTLTELRD HHHHHHHHHCCCEEEEECCCEEECCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH QAQFFTRKAGAMLADKMLTHDFYGLALMSGDKPHINDEFSSMIWSLGGAWMQPIYNDQKQ HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHH ISHFEVPTINHEAIETAKLYRELMPYAVPVNEQFAFNEAANAIATGQAAMWPFAYNNLWH HCEECCCCCCHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHCCCHHCCCHHHHHHHH KSFKVEQNIPGARLAVSQVPGGYPYNGAYAFAVSYDSKNPQAAYWLIKYMGTYEAQHAYA HCEEECCCCCCCEEEHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEE LGGGNPCRMDVVTAPEFKSESLRTIAGAFEASHIANMFWSTKVLELGHFTSTAMGQIYPE ECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LSHACYRASRRPADSEDIFIKLSAEIKHLQNTYGEVPAIDKKTNDKH HHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA