| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yhhW [C]
Identifier: 126175200
GI number: 126175200
Start: 3526276
End: 3526986
Strand: Direct
Name: yhhW [C]
Synonym: Sbal_2998
Alternate gene names: 126175200
Gene position: 3526276-3526986 (Clockwise)
Preceding gene: 126175199
Following gene: 126175206
Centisome position: 68.77
GC content: 48.66
Gene sequence:
>711_bases ATGATCACATTAAGAAAAGCACAGGACCGCGGTCAAGCAGATTTAGGCTGGCTAAAGAGTCAACATACCTTCTCTTTCTC TAGCTACTATGACCCAGAGCACATGGGGATTTCATCCCTAAGAGTCATCAACGATGACAGAGTAACGCCCGGCGCAGGTT TTGATACCCATGGTCATAAAGACATGGAGATCATCAGTTACGTGATATCTGGCACTATCGCCCATAAAGATAGTTTCGGT AATATCAAAACCTTACCCGCTGGTGAGTTTCAATTGATGTCGGCGGGTAAAGGCATTTACCACAGCGAGTTCAATGCTTC TAATACTGAGCCGCTACACTTTTTACAGATTTGGATCCGCCCAGATACCTTAGGCATAGATGCGGGTTATCAGCAAAAGG CATTCGAGCAGAGCTCACCGCTGACGGCAGTGGTGACACCACACGGGGAAAATGGCACGCTAAAAGTGCAACAGGATGCG ACCCTATATCGTTTAGTGTTGAGCGAAGGCGAAAAAGTGACGATGGACAGAACCGCCGAACAAGCGAGTCGTCATCTGTA TGTTCAATTGATTGAAGGTACGCTGGATATCAATGGCACAACACTCACGGCGGGGGACGGCGCACATCTGACCCAACTCG CCAGTGTCGACTTTACGGCAACAAGCGGACAAGTCACCGCACTAGTATTCGACTTGTCGGCTAACGCGTAA
Upstream 100 bases:
>100_bases CGCCCTACTAGCAGCCACAGTGTCATTGGCGGTTTCAGGTGCCGGTAAGTTCGCTATCGATAACCTATTCGCTAACCGCA TCAAATAAAGGGGAAGCAAG
Downstream 100 bases:
>100_bases TACCAGCGATGGCTTAACTGAACCACTCAGTAAAGCCGCTTTACTATTGTGCAAGTGATTACATGCCAGCTTGATAAGCA CTCACCTAGCAGCACTGCCA
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MITLRKAQDRGQADLGWLKSQHTFSFSSYYDPEHMGISSLRVINDDRVTPGAGFDTHGHKDMEIISYVISGTIAHKDSFG NIKTLPAGEFQLMSAGKGIYHSEFNASNTEPLHFLQIWIRPDTLGIDAGYQQKAFEQSSPLTAVVTPHGENGTLKVQQDA TLYRLVLSEGEKVTMDRTAEQASRHLYVQLIEGTLDINGTTLTAGDGAHLTQLASVDFTATSGQVTALVFDLSANA
Sequences:
>Translated_236_residues MITLRKAQDRGQADLGWLKSQHTFSFSSYYDPEHMGISSLRVINDDRVTPGAGFDTHGHKDMEIISYVISGTIAHKDSFG NIKTLPAGEFQLMSAGKGIYHSEFNASNTEPLHFLQIWIRPDTLGIDAGYQQKAFEQSSPLTAVVTPHGENGTLKVQQDA TLYRLVLSEGEKVTMDRTAEQASRHLYVQLIEGTLDINGTTLTAGDGAHLTQLASVDFTATSGQVTALVFDLSANA >Mature_236_residues MITLRKAQDRGQADLGWLKSQHTFSFSSYYDPEHMGISSLRVINDDRVTPGAGFDTHGHKDMEIISYVISGTIAHKDSFG NIKTLPAGEFQLMSAGKGIYHSEFNASNTEPLHFLQIWIRPDTLGIDAGYQQKAFEQSSPLTAVVTPHGENGTLKVQQDA TLYRLVLSEGEKVTMDRTAEQASRHLYVQLIEGTLDINGTTLTAGDGAHLTQLASVDFTATSGQVTALVFDLSANA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Escherichia coli, GI1789847, Length=232, Percent_Identity=48.2758620689655, Blast_Score=226, Evalue=9e-61, Organism=Escherichia coli, GI1789493, Length=246, Percent_Identity=33.3333333333333, Blast_Score=132, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25731; Mature: 25731
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLRKAQDRGQADLGWLKSQHTFSFSSYYDPEHMGISSLRVINDDRVTPGAGFDTHGHK CEEECCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC DMEIISYVISGTIAHKDSFGNIKTLPAGEFQLMSAGKGIYHSEFNASNTEPLHFLQIWIR HHHHHHHHHHCEEEECCCCCCEEECCCCCEEEEECCCCEEECCCCCCCCCCEEEEEEEEC PDTLGIDAGYQQKAFEQSSPLTAVVTPHGENGTLKVQQDATLYRLVLSEGEKVTMDRTAE CCEEECCCCCHHHHHHCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEHHHHH QASRHLYVQLIEGTLDINGTTLTAGDGAHLTQLASVDFTATSGQVTALVFDLSANA HHHHEEEEEEEECEEECCCEEEECCCCCCEEEEEEEEEEECCCEEEEEEEEECCCC >Mature Secondary Structure MITLRKAQDRGQADLGWLKSQHTFSFSSYYDPEHMGISSLRVINDDRVTPGAGFDTHGHK CEEECCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC DMEIISYVISGTIAHKDSFGNIKTLPAGEFQLMSAGKGIYHSEFNASNTEPLHFLQIWIR HHHHHHHHHHCEEEECCCCCCEEECCCCCEEEEECCCCEEECCCCCCCCCCEEEEEEEEC PDTLGIDAGYQQKAFEQSSPLTAVVTPHGENGTLKVQQDATLYRLVLSEGEKVTMDRTAE CCEEECCCCCHHHHHHCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEHHHHH QASRHLYVQLIEGTLDINGTTLTAGDGAHLTQLASVDFTATSGQVTALVFDLSANA HHHHEEEEEEEECEEECCCEEEECCCCCCEEEEEEEEEEECCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]