| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is 126175206
Identifier: 126175206
GI number: 126175206
Start: 3530391
End: 3531248
Strand: Direct
Name: 126175206
Synonym: Sbal_3004
Alternate gene names: NA
Gene position: 3530391-3531248 (Clockwise)
Preceding gene: 126175200
Following gene: 126175207
Centisome position: 68.85
GC content: 46.04
Gene sequence:
>858_bases ATGATAGTGTTAATCGGCGGAGAAAAAGGCGGCAGCGGTAAAAGTTGCTTAGCCCAAAACATAGCAGTTTTTCTAACCAC AGAATGCAATGCCTCGGTCATCATGGTGGACTGCGATCCCCAGCGCACCACATCAGATTGGATCCAGGCGAGAAACAACA ATCCCAAACTGGCCAGCATTAATTGTGTGCAGCTTTACGGCAAGATCCGTAATGACTTGCTCAGTCTTGAACAACATTAT GATGTGGTCATAGTCGACTGTGGTGGTCAAGACAACCTAGCGCTGCGAGCAACCATGTCAGTCGCCGCTTACATTTTAAT GCCCTTAAGACCTAAGCGCCGCGATTTGAAAACCGTTTGCCACATGGATGATATCGTCGCGACCTGTAAGATGATAAACC CTAAGTTACGGGCTTCATTTGTGATCACCCAATGCCCAAATTTACCTAATCAAGCTAACCGAATTTTAGAAGCCAAAGAA GTCTGTAAAACCTATGATATCAATGTCCTTGATGCAATAACCTACTGCAGGAATGTGTATGATGACAGCGAAGAGTCAGG TCTGTCAGTGATTGAAATCGACCCTAACGGAAAGGCCGCCGACGAAATCCGCACTATCGCTTGTGAACTGTTCCAAGTTG ATTGCGCCGCCAATTTAGAAGACCGCCTACATCCTGCACTGCTCGCTCAGAGTGCTGGTAAGGGTCAGATGCACAATGGT TTGACAAATAGTGGTTTGACAAATAATGGTTTGCTCAATAATGGTTTGCTCCATCAAACTCAACCCACTCACCTTAACAC TAAACAAAGGGGGCAAAATGGGACTCAGCGACCTCAAGAAAAACGCTATGCCATCTAG
Upstream 100 bases:
>100_bases TAACATAAGGTTTACATTCGATTTCGAGCACAAATGCGGTGTGGCTCCAAACTCATCAACTCGCTGCCCAAGGGTCATCA AAAGAATTAAGGAATGCGTC
Downstream 100 bases:
>100_bases CAGCATACAACCGTCGCTTTCGTTAGATGAGTTTATTGAGGCAGCCAACTTATATGCAATGGGACAAAGCCCTAATAAGA CAAAAGGCAGTCATTTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Partition Protein; ParA Family Protein; Plasmid Partitioning Protein; ParA-Like Protein; Plasmid Partition Protein ParA; Partitioning Protein; Plasmid Partition Protein ParA-Like Protein; Plasmid Partitioning-Family Protein; ATPase Involved In Chromosome Partitioning-Like Protein; Plasmid Stability Protein ParA; Plasmid Stability/Partitioning Protein; ATPases Involved In Chromosome Partitioning; Plasmid Partitioning Protein-Like; CobQ/CobB/MinD/ParA Domain-Containing Protein; ParA Partitioning Protein; Plasmid Segregation Oscillating ATPase ParF; Partitioning Protein ParA Family; Plasmid Stability Protein; ATPase Putative Partition Protein; Chromosome Partitioning ATPase ParA; Chromosome Partitioning; ATPase; ParA Protein; MinD/ParA Family ATPase; Partition Protein A; ParA Partitioning-Like Protein; Chromosome Partitioning Protein ParA; Partition Protein ATPase Activity; PARA Protein; Partitioning Protein ParA-Family; ParA Plasmid Partitioning Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MIVLIGGEKGGSGKSCLAQNIAVFLTTECNASVIMVDCDPQRTTSDWIQARNNNPKLASINCVQLYGKIRNDLLSLEQHY DVVIVDCGGQDNLALRATMSVAAYILMPLRPKRRDLKTVCHMDDIVATCKMINPKLRASFVITQCPNLPNQANRILEAKE VCKTYDINVLDAITYCRNVYDDSEESGLSVIEIDPNGKAADEIRTIACELFQVDCAANLEDRLHPALLAQSAGKGQMHNG LTNSGLTNNGLLNNGLLHQTQPTHLNTKQRGQNGTQRPQEKRYAI
Sequences:
>Translated_285_residues MIVLIGGEKGGSGKSCLAQNIAVFLTTECNASVIMVDCDPQRTTSDWIQARNNNPKLASINCVQLYGKIRNDLLSLEQHY DVVIVDCGGQDNLALRATMSVAAYILMPLRPKRRDLKTVCHMDDIVATCKMINPKLRASFVITQCPNLPNQANRILEAKE VCKTYDINVLDAITYCRNVYDDSEESGLSVIEIDPNGKAADEIRTIACELFQVDCAANLEDRLHPALLAQSAGKGQMHNG LTNSGLTNNGLLNNGLLHQTQPTHLNTKQRGQNGTQRPQEKRYAI >Mature_285_residues MIVLIGGEKGGSGKSCLAQNIAVFLTTECNASVIMVDCDPQRTTSDWIQARNNNPKLASINCVQLYGKIRNDLLSLEQHY DVVIVDCGGQDNLALRATMSVAAYILMPLRPKRRDLKTVCHMDDIVATCKMINPKLRASFVITQCPNLPNQANRILEAKE VCKTYDINVLDAITYCRNVYDDSEESGLSVIEIDPNGKAADEIRTIACELFQVDCAANLEDRLHPALLAQSAGKGQMHNG LTNSGLTNNGLLNNGLLHQTQPTHLNTKQRGQNGTQRPQEKRYAI
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31366; Mature: 31366
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLIGGEKGGSGKSCLAQNIAVFLTTECNASVIMVDCDPQRTTSDWIQARNNNPKLASI CEEEEECCCCCCCHHHHHCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEE NCVQLYGKIRNDLLSLEQHYDVVIVDCGGQDNLALRATMSVAAYILMPLRPKRRDLKTVC HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHH HMDDIVATCKMINPKLRASFVITQCPNLPNQANRILEAKEVCKTYDINVLDAITYCRNVY HHHHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC DDSEESGLSVIEIDPNGKAADEIRTIACELFQVDCAANLEDRLHPALLAQSAGKGQMHNG CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC LTNSGLTNNGLLNNGLLHQTQPTHLNTKQRGQNGTQRPQEKRYAI CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCC >Mature Secondary Structure MIVLIGGEKGGSGKSCLAQNIAVFLTTECNASVIMVDCDPQRTTSDWIQARNNNPKLASI CEEEEECCCCCCCHHHHHCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEE NCVQLYGKIRNDLLSLEQHYDVVIVDCGGQDNLALRATMSVAAYILMPLRPKRRDLKTVC HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHH HMDDIVATCKMINPKLRASFVITQCPNLPNQANRILEAKEVCKTYDINVLDAITYCRNVY HHHHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC DDSEESGLSVIEIDPNGKAADEIRTIACELFQVDCAANLEDRLHPALLAQSAGKGQMHNG CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC LTNSGLTNNGLLNNGLLHQTQPTHLNTKQRGQNGTQRPQEKRYAI CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA