| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is ushA [C]
Identifier: 126175197
GI number: 126175197
Start: 3522769
End: 3524514
Strand: Direct
Name: ushA [C]
Synonym: Sbal_2995
Alternate gene names: 126175197
Gene position: 3522769-3524514 (Clockwise)
Preceding gene: 126175196
Following gene: 126175199
Centisome position: 68.71
GC content: 50.0
Gene sequence:
>1746_bases ATGACACAGGGTTACACACTCTCACTCGCGCACATCAATGACACCCATTCGAATTTTGAACCCAGCCGCGTCCAATTTAA CCTTAACATCGGCCAGCATAAGCTTGATGTAACCAGCCATAGCGGTGGTTATGCCCGCATCGGCCATCACATCACTAAGG CACGTCAAGCCGCCGCACAAACCGATACGCCGTTTATTTTCCTGCACGGTGGTGACAGCTTCCAAGGCACGCTTTATTTC AGCCATTTTAAAGGCAAGGCCAACGCCCACTTACTTAATCTGTTAGCGCCCGATGCTATGGTCATTGGCAACCACGATAT CGATGAAGGTAACGCCAGACTTGCCGAGTTTGCTAAGCAGATTGATTTCCCATTGCTTGCGGGCAACATGGATTTAAGCC AAGAAGATCTCAACAAACCCGGTTGTCTGCGCGGTTTGCCTAATATCTTGGATTATGATCATCAGCAAAAACGCGCGAAA TACCTGCTTAAGCCTTTCCACGATAAGACGTTAGCCATTGTCGGTATTACCTTAGATCAAATGAAAGAGATCGCTCGCCC CGATCCCGACACTCATTTTGTCGATGCTATAGCCACAACCGCACGCACGGTTGAGCACCTTAAAAATCAAGGTATTAAAC ATATCATAGTGCTCAGTCACTTAGGCTTAGATCAAGATAAACGCCTCGCGGCCGAAGTGGAGGGTATTAGCCTTATCGTC GGTGGTCACACGCATACGCTACAGGGCGATTTTCGCGCCTTAGGTTTGAGCAACCTGCCCTACGGTGAAGTCATCAACAA CACGCCGATAGTGCATGCGGGTAAATATGCCGAAGTCGTCGGCTTAGCCGAGATAACGTTTGACGCTGAAGGCAAAGTGC TGAGTCTAACAGGCGGCAACTATTTCATGCTGGATCAACACTTTATCTTAAGTGCTAACACAGCTGTCGATAATCAAGAT TACCAAGCGGTGCGCCAACAGCTCAGTCAGCACCCAAATGTCCTTTGGGATGATGCCGATGCCGATATTGATGGCGTGAT CCGAGACATCTATAAACCCGCCATCGCGGATATGGAGAACAAAGTCTTAGCACTGGTGCCAAAAAACTTAGTCCATACAC GCTTGCCCTCTAAGGCTCTGCCCCACGGCAGTGAAGTTGCGCCATGGGTCAGTCGCAGCATGTTCCAAGAAGCTAAGCTT GTTGATCCTAGGGTAAACTTTGCCCTGCATAATGCTGGCGGTGTGCGCCAGTCAGTAGCCCAAGGCCAGTTGACGTTGGC GGATGTGATGGGGCAATTACTGCCCTTCGAATTGCCGCTGGTTAAGTATGAAATTCAAGGTCAATTCCTCTATCAAGCGC TCGAATCGGCGATTAACGCGGCGACCAACAACAGCGTCCGTGGCACTGGTGCGGGTAGCTTCCCTTACACCTACGGCTTA CGGTATTACTACGATGGCCGGCGTCCACTGGGCGAGCGTTTATTTAGATTGGAGATGATGCAGCAGGACAGCCAATCTCT TTGGTATCCCGTTGAGCCTGAGTCACTGTATGTCGGGGTATCGACGTCTTACACTGCTGCGGGTAAGGAAGGCTATCATC CATTACTGCAAGCCCGCTGGCAGGAGTCGATGGAGTCTCTGACATTGCCACAAGCCTTTATTCGATTTTTAAATCGCTCA CCGAATCTGTCTGATTTACTGTCACAGCACGTGCATTACACCAGCCACAGCCAACGTATGGGTTAA
Upstream 100 bases:
>100_bases TCCCTTTATTCTTTTAGAATGCAAATGACTCAGAACCGTCTGAACCTCGCATTTTGAGGTCGCTTGGGTATATACTCACC CGCCGTAATAGAGGTAAGTT
Downstream 100 bases:
>100_bases GTGCCAAGGCTCCTCATGGCGTCAACATTGATGCAGTGAGGAGCAAAGTAAATGAATGAGTGACTGGGTAACAGTCTTCC TTACAAAGCGTTGAATAGAC
Product: 5'-nucleotidase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MTQGYTLSLAHINDTHSNFEPSRVQFNLNIGQHKLDVTSHSGGYARIGHHITKARQAAAQTDTPFIFLHGGDSFQGTLYF SHFKGKANAHLLNLLAPDAMVIGNHDIDEGNARLAEFAKQIDFPLLAGNMDLSQEDLNKPGCLRGLPNILDYDHQQKRAK YLLKPFHDKTLAIVGITLDQMKEIARPDPDTHFVDAIATTARTVEHLKNQGIKHIIVLSHLGLDQDKRLAAEVEGISLIV GGHTHTLQGDFRALGLSNLPYGEVINNTPIVHAGKYAEVVGLAEITFDAEGKVLSLTGGNYFMLDQHFILSANTAVDNQD YQAVRQQLSQHPNVLWDDADADIDGVIRDIYKPAIADMENKVLALVPKNLVHTRLPSKALPHGSEVAPWVSRSMFQEAKL VDPRVNFALHNAGGVRQSVAQGQLTLADVMGQLLPFELPLVKYEIQGQFLYQALESAINAATNNSVRGTGAGSFPYTYGL RYYYDGRRPLGERLFRLEMMQQDSQSLWYPVEPESLYVGVSTSYTAAGKEGYHPLLQARWQESMESLTLPQAFIRFLNRS PNLSDLLSQHVHYTSHSQRMG
Sequences:
>Translated_581_residues MTQGYTLSLAHINDTHSNFEPSRVQFNLNIGQHKLDVTSHSGGYARIGHHITKARQAAAQTDTPFIFLHGGDSFQGTLYF SHFKGKANAHLLNLLAPDAMVIGNHDIDEGNARLAEFAKQIDFPLLAGNMDLSQEDLNKPGCLRGLPNILDYDHQQKRAK YLLKPFHDKTLAIVGITLDQMKEIARPDPDTHFVDAIATTARTVEHLKNQGIKHIIVLSHLGLDQDKRLAAEVEGISLIV GGHTHTLQGDFRALGLSNLPYGEVINNTPIVHAGKYAEVVGLAEITFDAEGKVLSLTGGNYFMLDQHFILSANTAVDNQD YQAVRQQLSQHPNVLWDDADADIDGVIRDIYKPAIADMENKVLALVPKNLVHTRLPSKALPHGSEVAPWVSRSMFQEAKL VDPRVNFALHNAGGVRQSVAQGQLTLADVMGQLLPFELPLVKYEIQGQFLYQALESAINAATNNSVRGTGAGSFPYTYGL RYYYDGRRPLGERLFRLEMMQQDSQSLWYPVEPESLYVGVSTSYTAAGKEGYHPLLQARWQESMESLTLPQAFIRFLNRS PNLSDLLSQHVHYTSHSQRMG >Mature_580_residues TQGYTLSLAHINDTHSNFEPSRVQFNLNIGQHKLDVTSHSGGYARIGHHITKARQAAAQTDTPFIFLHGGDSFQGTLYFS HFKGKANAHLLNLLAPDAMVIGNHDIDEGNARLAEFAKQIDFPLLAGNMDLSQEDLNKPGCLRGLPNILDYDHQQKRAKY LLKPFHDKTLAIVGITLDQMKEIARPDPDTHFVDAIATTARTVEHLKNQGIKHIIVLSHLGLDQDKRLAAEVEGISLIVG GHTHTLQGDFRALGLSNLPYGEVINNTPIVHAGKYAEVVGLAEITFDAEGKVLSLTGGNYFMLDQHFILSANTAVDNQDY QAVRQQLSQHPNVLWDDADADIDGVIRDIYKPAIADMENKVLALVPKNLVHTRLPSKALPHGSEVAPWVSRSMFQEAKLV DPRVNFALHNAGGVRQSVAQGQLTLADVMGQLLPFELPLVKYEIQGQFLYQALESAINAATNNSVRGTGAGSFPYTYGLR YYYDGRRPLGERLFRLEMMQQDSQSLWYPVEPESLYVGVSTSYTAAGKEGYHPLLQARWQESMESLTLPQAFIRFLNRSP NLSDLLSQHVHYTSHSQRMG
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=548, Percent_Identity=24.6350364963504, Blast_Score=126, Evalue=7e-29, Organism=Drosophila melanogaster, GI28573524, Length=545, Percent_Identity=28.6238532110092, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24641187, Length=550, Percent_Identity=26.9090909090909, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI19922444, Length=563, Percent_Identity=24.866785079929, Blast_Score=139, Evalue=7e-33, Organism=Drosophila melanogaster, GI19922446, Length=519, Percent_Identity=25.4335260115607, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI24654424, Length=519, Percent_Identity=25.4335260115607, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI221329836, Length=593, Percent_Identity=24.6205733558179, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - InterPro: IPR006420 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 64498; Mature: 64367
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGYTLSLAHINDTHSNFEPSRVQFNLNIGQHKLDVTSHSGGYARIGHHITKARQAAAQ CCCCEEEEEEEECCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHC TDTPFIFLHGGDSFQGTLYFSHFKGKANAHLLNLLAPDAMVIGNHDIDEGNARLAEFAKQ CCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHH IDFPLLAGNMDLSQEDLNKPGCLRGLPNILDYDHQQKRAKYLLKPFHDKTLAIVGITLDQ CCCCEEECCCCCCHHHCCCCCHHHCCCHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEHHH MKEIARPDPDTHFVDAIATTARTVEHLKNQGIKHIIVLSHLGLDQDKRLAAEVEGISLIV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCEEEEE GGHTHTLQGDFRALGLSNLPYGEVINNTPIVHAGKYAEVVGLAEITFDAEGKVLSLTGGN CCCEEEECCCHHEECCCCCCCCHHHCCCCEEECCCHHHHEEEEEEEECCCCCEEEEECCC YFMLDQHFILSANTAVDNQDYQAVRQQLSQHPNVLWDDADADIDGVIRDIYKPAIADMEN EEEEECEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCC KVLALVPKNLVHTRLPSKALPHGSEVAPWVSRSMFQEAKLVDPRVNFALHNAGGVRQSVA CEEEEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHH QGQLTLADVMGQLLPFELPLVKYEIQGQFLYQALESAINAATNNSVRGTGAGSFPYTYGL CCCEEHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECE RYYYDGRRPLGERLFRLEMMQQDSQSLWYPVEPESLYVGVSTSYTAAGKEGYHPLLQARW EEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHH QESMESLTLPQAFIRFLNRSPNLSDLLSQHVHYTSHSQRMG HHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TQGYTLSLAHINDTHSNFEPSRVQFNLNIGQHKLDVTSHSGGYARIGHHITKARQAAAQ CCCEEEEEEEECCCCCCCCCCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHC TDTPFIFLHGGDSFQGTLYFSHFKGKANAHLLNLLAPDAMVIGNHDIDEGNARLAEFAKQ CCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHH IDFPLLAGNMDLSQEDLNKPGCLRGLPNILDYDHQQKRAKYLLKPFHDKTLAIVGITLDQ CCCCEEECCCCCCHHHCCCCCHHHCCCHHHCCCCHHHHHHHHHCCCCCCEEEEEEEEHHH MKEIARPDPDTHFVDAIATTARTVEHLKNQGIKHIIVLSHLGLDQDKRLAAEVEGISLIV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHCCCCEEEEE GGHTHTLQGDFRALGLSNLPYGEVINNTPIVHAGKYAEVVGLAEITFDAEGKVLSLTGGN CCCEEEECCCHHEECCCCCCCCHHHCCCCEEECCCHHHHEEEEEEEECCCCCEEEEECCC YFMLDQHFILSANTAVDNQDYQAVRQQLSQHPNVLWDDADADIDGVIRDIYKPAIADMEN EEEEECEEEEECCCCCCCHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCC KVLALVPKNLVHTRLPSKALPHGSEVAPWVSRSMFQEAKLVDPRVNFALHNAGGVRQSVA CEEEEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHH QGQLTLADVMGQLLPFELPLVKYEIQGQFLYQALESAINAATNNSVRGTGAGSFPYTYGL CCCEEHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECE RYYYDGRRPLGERLFRLEMMQQDSQSLWYPVEPESLYVGVSTSYTAAGKEGYHPLLQARW EEEECCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHH QESMESLTLPQAFIRFLNRSPNLSDLLSQHVHYTSHSQRMG HHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]