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The map label for this gene is yfjD [C]

Identifier: 126175196

GI number: 126175196

Start: 3521533

End: 3522624

Strand: Direct

Name: yfjD [C]

Synonym: Sbal_2994

Alternate gene names: 126175196

Gene position: 3521533-3522624 (Clockwise)

Preceding gene: 126175187

Following gene: 126175197

Centisome position: 68.68

GC content: 47.62

Gene sequence:

>1092_bases
ATGTTAACCCTCATCATTATAGTGCTTGTCGCTGTCGGAGTTTCTTTTCTGTGCAGTGTGTTCGAAGCTGTTCTGCTATC
GGTTACCCCAAGTTATATCGCATCACTCGAACAAACTGACAGTGCCGCAGCCGCGCGCTTGCGTAAACTGAAAGAAAATG
TCGAAGCCCCTTTGGTGTCAATCCTTACGTTGAATACTATCGCCCATACCGTCGGCGCCGCCGTTGCGGGTGCGCAAGCA
GCGAAAATATTTGGTGACGATATGTTGGGTGTTTTCTCGGGCGTATTGACCTTTATTATTCTGTTCTTCTCAGAAATTAT
TCCTAAATCATTGGGTGCCAACCATTGGCGTCGCCTCGCACCGAGCGTGTCTGTTGCCGTGATGTGGATGAAGCGTGTTA
CTAGACCGCTGATCTGGATGTCGCAGCAAGTTACTCGTTTGATGGGCAAAGGTGATGAAGGCCATTATATCCGCCAAGAA
ATGAGCGCTATGGCCAAAATCGGCCATGAATCCGGTGAGCTTGATGAGCAAGAGTCAAAAATTCTGACACAAATGCTCAA
GGTACGTGATATGCCCGTTACGGCAATTATGACGCCGCGCACTGTGATGTTCTCGCTGCCAGTTGATCTGACTCAAAATG
AGTTTGTGCGTCAATACCGCGACAAACCTTTTACCCGTATTCCCGTGTACGACCAAGATCATGATGATGTGATTGGTTAC
ATTACCCGCACCGATGTGTTGCTGGCTGAGCGTTACACGCCAGAAGCACCGATTGGTGAGCTTAAGCGGAGTTTATTTGT
GGTGCCTGAAACCGCAAAAATTCTGCCACTTTTTGAGCGTATGATTAAGCGTAACACCCAAATTGCTATGGTGGTTGACG
AGTACGGCAGTAGCCAAGGTATCGTGACTCAAGAAGATATTATCGAATCTATGTTAGGATTAGAGATTGTCGATTTAAAC
GATCCCGCGACCGATATGCAGCAATTAGCACGTAAACTTTGGACTAAGCGCATGAAGCAAAAAGGCATTCGCCTATCCGA
TGACGGTGATTTTGAAGCCGCATCCGATGATGACGAAGCCAAATCCGGCTGA

Upstream 100 bases:

>100_bases
TACAGACGCAAATAAATTTTAGCCAGTAACTCAATTAACCTATGCTAGAATCTCCACGGGCTAATGTTGGCCTAAAATAC
GGAGTTGTAATTCCACCTAT

Downstream 100 bases:

>100_bases
AGGCTAAGCAAGTTTAGTGCTTGTTAATATAAAGGGAGCCTAGCTCCCTTTATTCTTTTAGAATGCAAATGACTCAGAAC
CGTCTGAACCTCGCATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MLTLIIIVLVAVGVSFLCSVFEAVLLSVTPSYIASLEQTDSAAAARLRKLKENVEAPLVSILTLNTIAHTVGAAVAGAQA
AKIFGDDMLGVFSGVLTFIILFFSEIIPKSLGANHWRRLAPSVSVAVMWMKRVTRPLIWMSQQVTRLMGKGDEGHYIRQE
MSAMAKIGHESGELDEQESKILTQMLKVRDMPVTAIMTPRTVMFSLPVDLTQNEFVRQYRDKPFTRIPVYDQDHDDVIGY
ITRTDVLLAERYTPEAPIGELKRSLFVVPETAKILPLFERMIKRNTQIAMVVDEYGSSQGIVTQEDIIESMLGLEIVDLN
DPATDMQQLARKLWTKRMKQKGIRLSDDGDFEAASDDDEAKSG

Sequences:

>Translated_363_residues
MLTLIIIVLVAVGVSFLCSVFEAVLLSVTPSYIASLEQTDSAAAARLRKLKENVEAPLVSILTLNTIAHTVGAAVAGAQA
AKIFGDDMLGVFSGVLTFIILFFSEIIPKSLGANHWRRLAPSVSVAVMWMKRVTRPLIWMSQQVTRLMGKGDEGHYIRQE
MSAMAKIGHESGELDEQESKILTQMLKVRDMPVTAIMTPRTVMFSLPVDLTQNEFVRQYRDKPFTRIPVYDQDHDDVIGY
ITRTDVLLAERYTPEAPIGELKRSLFVVPETAKILPLFERMIKRNTQIAMVVDEYGSSQGIVTQEDIIESMLGLEIVDLN
DPATDMQQLARKLWTKRMKQKGIRLSDDGDFEAASDDDEAKSG
>Mature_363_residues
MLTLIIIVLVAVGVSFLCSVFEAVLLSVTPSYIASLEQTDSAAAARLRKLKENVEAPLVSILTLNTIAHTVGAAVAGAQA
AKIFGDDMLGVFSGVLTFIILFFSEIIPKSLGANHWRRLAPSVSVAVMWMKRVTRPLIWMSQQVTRLMGKGDEGHYIRQE
MSAMAKIGHESGELDEQESKILTQMLKVRDMPVTAIMTPRTVMFSLPVDLTQNEFVRQYRDKPFTRIPVYDQDHDDVIGY
ITRTDVLLAERYTPEAPIGELKRSLFVVPETAKILPLFERMIKRNTQIAMVVDEYGSSQGIVTQEDIIESMLGLEIVDLN
DPATDMQQLARKLWTKRMKQKGIRLSDDGDFEAASDDDEAKSG

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=356, Percent_Identity=24.438202247191, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI145693175, Length=308, Percent_Identity=26.2987012987013, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1786879, Length=182, Percent_Identity=29.1208791208791, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790664, Length=335, Percent_Identity=21.7910447761194, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87082033, Length=199, Percent_Identity=28.1407035175879, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6324512, Length=246, Percent_Identity=26.0162601626016, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 40452; Mature: 40452

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLIIIVLVAVGVSFLCSVFEAVLLSVTPSYIASLEQTDSAAAARLRKLKENVEAPLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTLNTIAHTVGAAVAGAQAAKIFGDDMLGVFSGVLTFIILFFSEIIPKSLGANHWRRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
PSVSVAVMWMKRVTRPLIWMSQQVTRLMGKGDEGHYIRQEMSAMAKIGHESGELDEQESK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
ILTQMLKVRDMPVTAIMTPRTVMFSLPVDLTQNEFVRQYRDKPFTRIPVYDQDHDDVIGY
HHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ITRTDVLLAERYTPEAPIGELKRSLFVVPETAKILPLFERMIKRNTQIAMVVDEYGSSQG
HHHHHHHHHHCCCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
IVTQEDIIESMLGLEIVDLNDPATDMQQLARKLWTKRMKQKGIRLSDDGDFEAASDDDEA
CCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCC
KSG
CCC
>Mature Secondary Structure
MLTLIIIVLVAVGVSFLCSVFEAVLLSVTPSYIASLEQTDSAAAARLRKLKENVEAPLVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTLNTIAHTVGAAVAGAQAAKIFGDDMLGVFSGVLTFIILFFSEIIPKSLGANHWRRLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
PSVSVAVMWMKRVTRPLIWMSQQVTRLMGKGDEGHYIRQEMSAMAKIGHESGELDEQESK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHH
ILTQMLKVRDMPVTAIMTPRTVMFSLPVDLTQNEFVRQYRDKPFTRIPVYDQDHDDVIGY
HHHHHHHHCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ITRTDVLLAERYTPEAPIGELKRSLFVVPETAKILPLFERMIKRNTQIAMVVDEYGSSQG
HHHHHHHHHHCCCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
IVTQEDIIESMLGLEIVDLNDPATDMQQLARKLWTKRMKQKGIRLSDDGDFEAASDDDEA
CCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCC
KSG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]