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The map label for this gene is 126175094

Identifier: 126175094

GI number: 126175094

Start: 3402863

End: 3403840

Strand: Reverse

Name: 126175094

Synonym: Sbal_2891

Alternate gene names: NA

Gene position: 3403840-3402863 (Counterclockwise)

Preceding gene: 126175095

Following gene: 126175093

Centisome position: 66.39

GC content: 39.37

Gene sequence:

>978_bases
ATGAACACACAAATTACTCAAAATCCAAATACATATAAAACAGACGCGCAATTCCCTCAAACCACAAGCGATGACGAAAT
CGATCTTCGTGAATTGTTCTCTGTCATCTGGCAAGGCAAATGGTTAATCATTGCCATTACAGCTGTATTCGCTATTGGTG
CAGTTATTTTTGCCATAAAACAACCCAATATCTATAAATCTGAAGCCCTGCTTGCGCCTGCATCTGAAGAGAAAGGTGGC
GGTTTAAGTGCGTTAGCGTCTCAGTTTGGCGGTTTAGCTAGCCTTGCAGGTGTAAATCTCGGTGGTAAAGGTGGTACTGA
TAAAACTGAATTGGCAATTCAAGTATTAAAGTCTCGCCAATTTACCAGCGAGTTTATTCAAAAGCACAATATCCTTGCTG
ATTTAATGGCTGCTGAAAAATGGGATAGGGATGCAGATAAACTTATCTATGATCCTGACCTATATAACGAGCAAACCAAT
ACTTGGGTGCGTGAAGTTAAAGCGCCATTTAAACCTGAGCCATCAATGCAAGAGGCTTATAAAGCCTTTAGCAAAATGAT
TGCTGTTAATAAAGCGAAAGAAACTGGAATGGTCACTATTTCAGTTGAGCATTTATCACCAGCTGTTGCGCAGCAGTGGG
TTGCTTGGTTAATCCAAGATATTAATAAAGTAATGAAAGACCGCGATGTAGCTGAGGCGAATCGTAGCAGTGAGTTTTTA
AATAAACAAATTGCTTTAACTAATGTGGCAGATATTCGAACCATTTTGTATAAGTTAGTAGAAGAACAAGCTAAAACCAT
TATGTTTGCTGAAGTGCGTGATGAATACGTTTTTAAAACCATCGATCCTGCATTAGTACCAGAAGAAAAAGCAAAACCTA
AACGCGCATTAATTTGCGTATTAGGTACACTGCTTGGCGGTATGTTAGGGGTAATGCTAGTGCTAGTCAGGCATTTTGTA
AGAAAAGACGCAGCATAA

Upstream 100 bases:

>100_bases
CCAAGCACCTACAACCTTTTATTTTCTCGAACCTTCTTTAAATATCTTTAAGTTTTCCTAGGGCCTAGTACCTAGGATCT
AGGACCTAGAACCTAAAAAA

Downstream 100 bases:

>100_bases
AAGATGGCTTACGAACGACAGAACTCTGCTTTGCCCTTACGGTAAGCGTATTGTTCCGTTAACAGCTTTCTAACTTTAGT
AAGCGTTACATTTTATATTT

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Chain Length Determinant Protein; Lipopolysaccharide Biosynthesis; Chain Length Determinant Family Protein; OtnB Protein; O-Antigen Length Determinant Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNTQITQNPNTYKTDAQFPQTTSDDEIDLRELFSVIWQGKWLIIAITAVFAIGAVIFAIKQPNIYKSEALLAPASEEKGG
GLSALASQFGGLASLAGVNLGGKGGTDKTELAIQVLKSRQFTSEFIQKHNILADLMAAEKWDRDADKLIYDPDLYNEQTN
TWVREVKAPFKPEPSMQEAYKAFSKMIAVNKAKETGMVTISVEHLSPAVAQQWVAWLIQDINKVMKDRDVAEANRSSEFL
NKQIALTNVADIRTILYKLVEEQAKTIMFAEVRDEYVFKTIDPALVPEEKAKPKRALICVLGTLLGGMLGVMLVLVRHFV
RKDAA

Sequences:

>Translated_325_residues
MNTQITQNPNTYKTDAQFPQTTSDDEIDLRELFSVIWQGKWLIIAITAVFAIGAVIFAIKQPNIYKSEALLAPASEEKGG
GLSALASQFGGLASLAGVNLGGKGGTDKTELAIQVLKSRQFTSEFIQKHNILADLMAAEKWDRDADKLIYDPDLYNEQTN
TWVREVKAPFKPEPSMQEAYKAFSKMIAVNKAKETGMVTISVEHLSPAVAQQWVAWLIQDINKVMKDRDVAEANRSSEFL
NKQIALTNVADIRTILYKLVEEQAKTIMFAEVRDEYVFKTIDPALVPEEKAKPKRALICVLGTLLGGMLGVMLVLVRHFV
RKDAA
>Mature_325_residues
MNTQITQNPNTYKTDAQFPQTTSDDEIDLRELFSVIWQGKWLIIAITAVFAIGAVIFAIKQPNIYKSEALLAPASEEKGG
GLSALASQFGGLASLAGVNLGGKGGTDKTELAIQVLKSRQFTSEFIQKHNILADLMAAEKWDRDADKLIYDPDLYNEQTN
TWVREVKAPFKPEPSMQEAYKAFSKMIAVNKAKETGMVTISVEHLSPAVAQQWVAWLIQDINKVMKDRDVAEANRSSEFL
NKQIALTNVADIRTILYKLVEEQAKTIMFAEVRDEYVFKTIDPALVPEEKAKPKRALICVLGTLLGGMLGVMLVLVRHFV
RKDAA

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36121; Mature: 36121

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQITQNPNTYKTDAQFPQTTSDDEIDLRELFSVIWQGKWLIIAITAVFAIGAVIFAIK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
QPNIYKSEALLAPASEEKGGGLSALASQFGGLASLAGVNLGGKGGTDKTELAIQVLKSRQ
CCCCCCCCCEECCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
FTSEFIQKHNILADLMAAEKWDRDADKLIYDPDLYNEQTNTWVREVKAPFKPEPSMQEAY
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHH
KAFSKMIAVNKAKETGMVTISVEHLSPAVAQQWVAWLIQDINKVMKDRDVAEANRSSEFL
HHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
NKQIALTNVADIRTILYKLVEEQAKTIMFAEVRDEYVFKTIDPALVPEEKAKPKRALICV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHH
LGTLLGGMLGVMLVLVRHFVRKDAA
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTQITQNPNTYKTDAQFPQTTSDDEIDLRELFSVIWQGKWLIIAITAVFAIGAVIFAIK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
QPNIYKSEALLAPASEEKGGGLSALASQFGGLASLAGVNLGGKGGTDKTELAIQVLKSRQ
CCCCCCCCCEECCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
FTSEFIQKHNILADLMAAEKWDRDADKLIYDPDLYNEQTNTWVREVKAPFKPEPSMQEAY
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHH
KAFSKMIAVNKAKETGMVTISVEHLSPAVAQQWVAWLIQDINKVMKDRDVAEANRSSEFL
HHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
NKQIALTNVADIRTILYKLVEEQAKTIMFAEVRDEYVFKTIDPALVPEEKAKPKRALICV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHHH
LGTLLGGMLGVMLVLVRHFVRKDAA
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA