| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174814
Identifier: 126174814
GI number: 126174814
Start: 3044435
End: 3045439
Strand: Reverse
Name: 126174814
Synonym: Sbal_2601
Alternate gene names: NA
Gene position: 3045439-3044435 (Counterclockwise)
Preceding gene: 126174816
Following gene: 126174808
Centisome position: 59.4
GC content: 44.98
Gene sequence:
>1005_bases ATGTTTGCAAATTCCCCCGTCGATATTTTTGCCTTTGCTGGTCGAGAAATATTTCTAAAACGTGATGATTTATTGCATCC AGCGTTTAGCGGCAATAAAGCGCGTAAATTCGGCTACTTTTTAGATCATGAGTTTATAGGCATCACCAAGGTGATAGGCC ACGGCTCACCCTTAGCGAACTCTTTGTATTCCCTATCAACATTGGCCAAGATGAAAGGCTGGCAGTGTGATTTTTATGTT GACCATATTGCCAGTCTAATAGTCAAGCATCCCACGGGGAATTACGCTGCGGCATTGGCAAATGGCGCCAATATTATCGA CTTAAGTGAGTTAATGGCGCAAAAGCTGGCGTTTACTCAGTCGCAGGGTGAACCTCAGGTTTTGTTAGAGATTAATGCTA GATCTGAGCCTGCTTTGCAAACGGGTAGTGCGCGACTGAGTTGCCAAGAGTATATCGAGACTCAGGTACTCGCGAATGAG CCGACGGCGCTTTTTATCCCAGAGGGCGGGCGTTGTTCCTACGCTGAATACGGGGTAAATGTATTGGCGCAAGAAATAGT GCAATTTGCGCAGGCGAATGATTTAGTCGATTTAACGGTATTTTTACCCTCGGGGACGGGGACGACGGCGTTATTTTTAA ATCAGTACTTTATTCGTCAGCAAACGGCGATTCGTGTCGTGACTTGCGCCGTGGTGGGCGGCGATGATTATTTACGTTTG CAATTCTCTATGCTTAATCCAAATACTCTCGAGCATCCACAGATAGTGAATGTCGGCAAAAAATATCACTTTGGTAAACT CTACCCTGAGTTTTATGCCATGTGGCAGCGCGTTTGTGCTTCAGGTATGCAATTTGAATTACTCTACGATCCCTTAGGTT TTATTGTGCTTGAGGATTACTTACAGCGTAGTGAATTAGGTCATGTGATGTATTTGCATCAAGGCGGATTATTGGGGAAT GAGACTATGTTGCCGCGTTATCAGCGTAAGTTTGCTGGAGTATGA
Upstream 100 bases:
>100_bases ATTGCTAATTTCTTAAGAGCAGAAGAGCAAAGGCGGCGTTACACTAGCCATCCCATTCAATGGCTTAAAAGCCTGAGTAT TTAATCGTTTGAGTAGCCTG
Downstream 100 bases:
>100_bases GACTTTTCAAAGAATAGTAATATAACCAGCGCAATAGATTAAGACCGCTTCTTTAAGACTGCAGATGGTTTCTTAAGATA GCAACTGGTTTCGTTTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: 1-Aminocyclopropane-1-Carboxylate Deaminase-Like Protein; D-Cysteine Desulfhydrase Family Protein
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MFANSPVDIFAFAGREIFLKRDDLLHPAFSGNKARKFGYFLDHEFIGITKVIGHGSPLANSLYSLSTLAKMKGWQCDFYV DHIASLIVKHPTGNYAAALANGANIIDLSELMAQKLAFTQSQGEPQVLLEINARSEPALQTGSARLSCQEYIETQVLANE PTALFIPEGGRCSYAEYGVNVLAQEIVQFAQANDLVDLTVFLPSGTGTTALFLNQYFIRQQTAIRVVTCAVVGGDDYLRL QFSMLNPNTLEHPQIVNVGKKYHFGKLYPEFYAMWQRVCASGMQFELLYDPLGFIVLEDYLQRSELGHVMYLHQGGLLGN ETMLPRYQRKFAGV
Sequences:
>Translated_334_residues MFANSPVDIFAFAGREIFLKRDDLLHPAFSGNKARKFGYFLDHEFIGITKVIGHGSPLANSLYSLSTLAKMKGWQCDFYV DHIASLIVKHPTGNYAAALANGANIIDLSELMAQKLAFTQSQGEPQVLLEINARSEPALQTGSARLSCQEYIETQVLANE PTALFIPEGGRCSYAEYGVNVLAQEIVQFAQANDLVDLTVFLPSGTGTTALFLNQYFIRQQTAIRVVTCAVVGGDDYLRL QFSMLNPNTLEHPQIVNVGKKYHFGKLYPEFYAMWQRVCASGMQFELLYDPLGFIVLEDYLQRSELGHVMYLHQGGLLGN ETMLPRYQRKFAGV >Mature_334_residues MFANSPVDIFAFAGREIFLKRDDLLHPAFSGNKARKFGYFLDHEFIGITKVIGHGSPLANSLYSLSTLAKMKGWQCDFYV DHIASLIVKHPTGNYAAALANGANIIDLSELMAQKLAFTQSQGEPQVLLEINARSEPALQTGSARLSCQEYIETQVLANE PTALFIPEGGRCSYAEYGVNVLAQEIVQFAQANDLVDLTVFLPSGTGTTALFLNQYFIRQQTAIRVVTCAVVGGDDYLRL QFSMLNPNTLEHPQIVNVGKKYHFGKLYPEFYAMWQRVCASGMQFELLYDPLGFIVLEDYLQRSELGHVMYLHQGGLLGN ETMLPRYQRKFAGV
Specific function: Unknown
COG id: COG2515
COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37244; Mature: 37244
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFANSPVDIFAFAGREIFLKRDDLLHPAFSGNKARKFGYFLDHEFIGITKVIGHGSPLAN CCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCHHCCEECCCCHHHHHHHHCCCCHHHH SLYSLSTLAKMKGWQCDFYVDHIASLIVKHPTGNYAAALANGANIIDLSELMAQKLAFTQ HHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCEEEECCCCCCEEEHHHHHHHHHHHHC SQGEPQVLLEINARSEPALQTGSARLSCQEYIETQVLANEPTALFIPEGGRCSYAEYGVN CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH VLAQEIVQFAQANDLVDLTVFLPSGTGTTALFLNQYFIRQQTAIRVVTCAVVGGDDYLRL HHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCEEEEEEEEEECCCCEEEE QFSMLNPNTLEHPQIVNVGKKYHFGKLYPEFYAMWQRVCASGMQFELLYDPLGFIVLEDY EEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH LQRSELGHVMYLHQGGLLGNETMLPRYQRKFAGV HHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MFANSPVDIFAFAGREIFLKRDDLLHPAFSGNKARKFGYFLDHEFIGITKVIGHGSPLAN CCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCHHCCEECCCCHHHHHHHHCCCCHHHH SLYSLSTLAKMKGWQCDFYVDHIASLIVKHPTGNYAAALANGANIIDLSELMAQKLAFTQ HHHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCEEEECCCCCCEEEHHHHHHHHHHHHC SQGEPQVLLEINARSEPALQTGSARLSCQEYIETQVLANEPTALFIPEGGRCSYAEYGVN CCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH VLAQEIVQFAQANDLVDLTVFLPSGTGTTALFLNQYFIRQQTAIRVVTCAVVGGDDYLRL HHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCEEEEEEEEEECCCCEEEE QFSMLNPNTLEHPQIVNVGKKYHFGKLYPEFYAMWQRVCASGMQFELLYDPLGFIVLEDY EEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH LQRSELGHVMYLHQGGLLGNETMLPRYQRKFAGV HHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA