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The map label for this gene is yafE [C]

Identifier: 126174808

GI number: 126174808

Start: 3040008

End: 3040622

Strand: Reverse

Name: yafE [C]

Synonym: Sbal_2595

Alternate gene names: 126174808

Gene position: 3040622-3040008 (Counterclockwise)

Preceding gene: 126174814

Following gene: 126174807

Centisome position: 59.3

GC content: 47.97

Gene sequence:

>615_bases
ATGAAATTAAATCCATTTGAGAAAAAGCTCGTTCAGCATCCAATACGTTTTTGGCTACAAAATCATGTCGAAGCGCCTTT
ACTAACGTCTATGATGCCTAAACCTATGGCTCGCTGCGAGCGTGCATTAGAAATCGGTTGTGGGTTTGGTAATGGAATTC
AGTTGATCCGTGAGCATTTTGGCGCAGGACATATCACGGCTGTGGATATCGACCCTGAAATGGTCGCAGCGGCGCAATCT
CGCTGGCAAGCTCGGCCACAAGGTTTGAAAGGGCTGAGTTTCTCTGTTGCCGACGCCTCTTGTCTTCCCTTTGCCGATGG
CGAGTTCGATATAGTCTTTGATTTTGCCGTATTCCACCATATTCCAGATTGGCAGGCAGCCATTAAGGACGTTGCCCGAG
TACTGAAACCAAACGGTTACTTTGTGGTAGAGGACTTATATCGCGCTGCAATTTGTAATCCACTGAGTCGACGCCTATTT
GAGCATCCACAACAAAATCGCTTTAATCACCGCGAGTTGTTACTTGTGTTGCGTCAAGCGGGGTTTGAGATAGTCTGCGA
CAGAAATGCCTTGGATCTTGCGGGCATGGTGCTTGCCCAGAAAGTGCTGCGTTAG

Upstream 100 bases:

>100_bases
GTGGCCTCTGGTGAACTTATGTTCCTATCATTACGTACCATAGTGGCAGTTCGATCAGTAAAATTATTCAACAATAGTTT
ACCCATATTTAGAGGATGGC

Downstream 100 bases:

>100_bases
GTGGCAACGCCGCTGACGCAAATTGAATGTTCGTTTTGAATGGATTGAATATTCGTGCTTTTGCTAATATTCACACTTAT
GCCAAAGCCAAATGTTTTGG

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKLNPFEKKLVQHPIRFWLQNHVEAPLLTSMMPKPMARCERALEIGCGFGNGIQLIREHFGAGHITAVDIDPEMVAAAQS
RWQARPQGLKGLSFSVADASCLPFADGEFDIVFDFAVFHHIPDWQAAIKDVARVLKPNGYFVVEDLYRAAICNPLSRRLF
EHPQQNRFNHRELLLVLRQAGFEIVCDRNALDLAGMVLAQKVLR

Sequences:

>Translated_204_residues
MKLNPFEKKLVQHPIRFWLQNHVEAPLLTSMMPKPMARCERALEIGCGFGNGIQLIREHFGAGHITAVDIDPEMVAAAQS
RWQARPQGLKGLSFSVADASCLPFADGEFDIVFDFAVFHHIPDWQAAIKDVARVLKPNGYFVVEDLYRAAICNPLSRRLF
EHPQQNRFNHRELLLVLRQAGFEIVCDRNALDLAGMVLAQKVLR
>Mature_204_residues
MKLNPFEKKLVQHPIRFWLQNHVEAPLLTSMMPKPMARCERALEIGCGFGNGIQLIREHFGAGHITAVDIDPEMVAAAQS
RWQARPQGLKGLSFSVADASCLPFADGEFDIVFDFAVFHHIPDWQAAIKDVARVLKPNGYFVVEDLYRAAICNPLSRRLF
EHPQQNRFNHRELLLVLRQAGFEIVCDRNALDLAGMVLAQKVLR

Specific function: Catalyzes the methylation of the lipid moiety of the intermediate compounds phthiotriol and glycosylated phenolphthiotriol dimycoserosates to form phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 23100; Mature: 23100

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNPFEKKLVQHPIRFWLQNHVEAPLLTSMMPKPMARCERALEIGCGFGNGIQLIREHF
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHC
GAGHITAVDIDPEMVAAAQSRWQARPQGLKGLSFSVADASCLPFADGEFDIVFDFAVFHH
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEHHHHHHC
IPDWQAAIKDVARVLKPNGYFVVEDLYRAAICNPLSRRLFEHPQQNRFNHRELLLVLRQA
CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCHHHHHHHHCHHCCCCCHHHHHHHHHHC
GFEIVCDRNALDLAGMVLAQKVLR
CCEEEECCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKLNPFEKKLVQHPIRFWLQNHVEAPLLTSMMPKPMARCERALEIGCGFGNGIQLIREHF
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHC
GAGHITAVDIDPEMVAAAQSRWQARPQGLKGLSFSVADASCLPFADGEFDIVFDFAVFHH
CCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCEEEEEHHHHHHC
IPDWQAAIKDVARVLKPNGYFVVEDLYRAAICNPLSRRLFEHPQQNRFNHRELLLVLRQA
CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCHHHHHHHHCHHCCCCCHHHHHHHHHHC
GFEIVCDRNALDLAGMVLAQKVLR
CCEEEECCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA