| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174795
Identifier: 126174795
GI number: 126174795
Start: 3027344
End: 3027703
Strand: Direct
Name: 126174795
Synonym: Sbal_2582
Alternate gene names: NA
Gene position: 3027344-3027703 (Clockwise)
Preceding gene: 126174794
Following gene: 126174798
Centisome position: 59.04
GC content: 52.78
Gene sequence:
>360_bases GTGAGCACCACCCATATCAGACATGAATTGTCAGAGCTTGAAGCTAATCTAAGGAAAGAAATCGGCGCGCTCCCTCCGTT CCTCGAAGCCATAGGGGAGCATTATGCTAGCCTGAGTCTGGCGGAATTAATTGATAAATTGGCGCAAACGCCACTGGCCG ATCACCCGCTATTTTGCCAGCTGAATAAACTTGATGCCGCCTTTTGTCAGCTCGACTTAGGCCTCTACGGCCTTTGCTCC GACTGCGAAGCGGAAATCGAAACCGAACGCTTAAGCCAAGATCCCACAGAACAACGCTGCGCCTCCTGCGCCGAACATTA TCAACACGAACACCGCCACGAGCTGCGCCTCACCCATTGA
Upstream 100 bases:
>100_bases AAAAACCTAAAATGTGGCAGATACTTGATCTTTATCATAGTCGTTGGTAGTGGAACTATTAGACTGGACGCCTAGAGTCA AATGAAATAGGCGATTTTAC
Downstream 100 bases:
>100_bases TAAAAGGAGTGCTCGCTAGCTTTACTGATAAACCCCTCGCAATGATAAAACCTCCGCCTAGGAGGTTTGAATTAGGTATT TTAAGCCCAACGAACCTTTC
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: DksA-Type Zinc Finger Protein; Transcriptional Regulators TraR/DksA Family Protein
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSTTHIRHELSELEANLRKEIGALPPFLEAIGEHYASLSLAELIDKLAQTPLADHPLFCQLNKLDAAFCQLDLGLYGLCS DCEAEIETERLSQDPTEQRCASCAEHYQHEHRHELRLTH
Sequences:
>Translated_119_residues MSTTHIRHELSELEANLRKEIGALPPFLEAIGEHYASLSLAELIDKLAQTPLADHPLFCQLNKLDAAFCQLDLGLYGLCS DCEAEIETERLSQDPTEQRCASCAEHYQHEHRHELRLTH >Mature_118_residues STTHIRHELSELEANLRKEIGALPPFLEAIGEHYASLSLAELIDKLAQTPLADHPLFCQLNKLDAAFCQLDLGLYGLCSD CEAEIETERLSQDPTEQRCASCAEHYQHEHRHELRLTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13491; Mature: 13360
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTHIRHELSELEANLRKEIGALPPFLEAIGEHYASLSLAELIDKLAQTPLADHPLFCQ CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LNKLDAAFCQLDLGLYGLCSDCEAEIETERLSQDPTEQRCASCAEHYQHEHRHELRLTH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure STTHIRHELSELEANLRKEIGALPPFLEAIGEHYASLSLAELIDKLAQTPLADHPLFCQ CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LNKLDAAFCQLDLGLYGLCSDCEAEIETERLSQDPTEQRCASCAEHYQHEHRHELRLTH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA