| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174711
Identifier: 126174711
GI number: 126174711
Start: 2919669
End: 2922176
Strand: Reverse
Name: 126174711
Synonym: Sbal_2498
Alternate gene names: NA
Gene position: 2922176-2919669 (Counterclockwise)
Preceding gene: 126174716
Following gene: 126174709
Centisome position: 56.99
GC content: 40.75
Gene sequence:
>2508_bases ATGAAGTCAGCGTATAAGGTTTTTCTCGCAGGATTGTGTTCATTTTTTTTAATTGCATGTGGTGGAGGAGGCAGCATCTC CAATGATGGTGGTACAACGCCTACACCGGGTGTTGTTACTGTTACCATGGGAATTTCAAATATTGATATTTCGGCTATAG CACCTGCGGAGGTCACTGCTAAAGTTGTAGATTCTAAACTTGGCCCTCTTGCTGGTATCTTAGTTACTTTTTCACTCAGT GATAGCAATATTGGATCTTTCACTCCCTCTATCGGAACAGCATTAACTGATGTTAATGGTGTAGCTAGCATTACACTAGT CACTGCGACTATTGCTGGAGCAGGTACTGTAAGCGCTAAACTTGACAGTGGTGAGTCCGGTAAGATTGGATTTAATATGA AGGGCGATGGTGGTGTCGCTGGTGGTGGTGCTCAAGTTTCATTAGTCTTAACTGATGCAAATGGCGCTCCCATACAATCT ATTAGCACTCTTTCACCTGGGAAATTAGTTGCCACAGTTACAGGTATTAAGAAGCCAACTATTGTAACTTTTTCTAGTCC TATAGGTGATTTGCCAATTAAAACTGCTGTAACGAACGCTCAAGGTAAGGCCACTGTTGATATTTATGCTGGAAGTGCTT TAGGTGCTGGAGAAGTTATGGCTTCACTAGTTACTGGTGAAGTGGGGAATACTATTGTTGTTGTTGGTGCAACTAACGTT GTTATGGGAAGTGGTAATCCTTTTGTGAAGGGTAAAGCTGCGGTTAGCAGTACAACCGTTTCTGCTGGTGGTACTGCAAC AATTTCTGTTTTAATTCAAGATGATTTAGGTAACGCATTTACTCAGCCTGTGGACGTTAACTTTTCTTCAACATGTGCAA CTAAAATTCCTGCCCAAGCACAAATAAGTTCGCCTGTATCATCTAGTAATGGCGTTGCTACATCTACCTACTTAGCACAA GGATGCGTAGGTGAAGATCAAATAAATGTTACTGCGAATGCTGGTGGAATTAGCTTGTCAGCCACAGGAACGATTAATGT TTTAAGATCTGATATAGGTAGTATTGTATTTGTATCGGCGGTTCCTGAAAATATTAGCATTCTTGGCACTGGCGGTATTG AATCTTCAGTGGTTAAGTTTAGAGTTCTAGACAAAAATAGTAACTTTGTTAGTAATCAGAATGTGAAATTTAATTTGAAT ACTGGTGTTGGTGGCGTAAAGCTAGCACCTCTCGAGGCAACAACTAATAATGAGGGGCTTGTACAAACAGTTGTGACAAC GGGTACCGTTGCAACATCGTTGAGAGTCACTGCGACAGTCGATGATAATTCAATTCCTGCAATATCGAGTCAGTCGAGTC AATTGATTATTTCAACGGGTATTCCTGACCAAGATAGTTTTTCACTTTCTGCACAAATTTTAAATGCAGAAGGCTGGGAC CGAGATGGTTCAGAAGTATTAGTCACTGCGCGTTTAGCTGATGCATTTAATAACCCTGTGCCTAATGGTACTACAGTTTC ATTTACCACTGAGGGTGGTTCTATTGAGGATGCCTGCCAAACGATAAAAGGGGCTTGTACTGTGAAATGGACAAGTCAGT TACCTCGACCATTGGGTGAAGTTCTAATTGACGGTGCTGGTATTCAGATTCGTGATCCTAAAGCGGGTATGATTCCAGAT CCTGCCTTAGGTATTTATGGTAATTTTTATGGCCAGAAATATGGTGGGCGTGCAACTATTACAGCTACTGCAATTGGTGA AGAGTCATTTCCAGATCTGAATGGTAATGGTCGTTTTGATGCCAGCGAAATGACAACATTTCTGACAGGCAAGGATGTTA CGGGCCAATCATTTGATTTAAATGATGCATTTAACGATTATAATGAAGATGGTATTTTTAATCCGCAGCAGGGCAGTGGG CAAATTGGTGGTGAGTTAGAAGAGTTAATTGATTTTAACTCGAATGGAGTATTTGATCTTAAAGATCATAAATATAACGG AGTTTTATGTTCTGATCCTGTGCATGCAGGTTGTGCTGATGGTGTGAGTAATGAGAAGTCGCTTTATGTACGCCGAAGTC TTGTTATCGTTATGTCTGGTAGTGCAGCCTATGCAACGAACGACAATGATATAAAAATCATTGATCAAGAATTAGTAGAT GGTGTCGATGCAGACGGCAAACCTACAACAGTGCTTGTTGCTAGAGAGCATTTAGGTGGTTCAATTCAGATTTATGGAAA GGGTACTGCTTCGGCTTCATTCACTCTGTCTGATTTGCATAATCAGCAATTGCCAGCAGGCTCAGTCGTTACTTTTGTAG CAAGTGCAGGTTCTGTTACTAGTGCAAACCAATATATTTGGCCGAGTTCAAATCATAACGGTGGTCGTGATTTTACCGTA TCATTAAAAGGGGAAGATAAGCCTAACTCAGGCACATTACTTGTAACTGTGACTACACCTAATAATGTTGTAACAGAGGT GCTTTCAATAGCTGTAAATATTTTATAA
Upstream 100 bases:
>100_bases GGTTCTAGTGAGTAAAATTAGTGAAAATTGTGTAATGTTAGCCTATAAGTAATAAGCGTCTAGCTTAAGTATCATCATCA GAGTAACAGGGAGCCTGACA
Downstream 100 bases:
>100_bases ATACGTTTGTTTATTGTATAAATAAAAGCGCACTTAATTGTGCGCTTTTTAGTGTCTAGTCATTGGAATTATATTTATTC ATTATCGCTGGAATTGATAA
Product: Ig domain-containing protein
Products: NA
Alternate protein names: Invasin Domain Protein; Intimin/Invasin Family Protein; Invasin Domain-Containing Protein; Ig Domain Domain Protein; Lipoprotein
Number of amino acids: Translated: 835; Mature: 835
Protein sequence:
>835_residues MKSAYKVFLAGLCSFFLIACGGGGSISNDGGTTPTPGVVTVTMGISNIDISAIAPAEVTAKVVDSKLGPLAGILVTFSLS DSNIGSFTPSIGTALTDVNGVASITLVTATIAGAGTVSAKLDSGESGKIGFNMKGDGGVAGGGAQVSLVLTDANGAPIQS ISTLSPGKLVATVTGIKKPTIVTFSSPIGDLPIKTAVTNAQGKATVDIYAGSALGAGEVMASLVTGEVGNTIVVVGATNV VMGSGNPFVKGKAAVSSTTVSAGGTATISVLIQDDLGNAFTQPVDVNFSSTCATKIPAQAQISSPVSSSNGVATSTYLAQ GCVGEDQINVTANAGGISLSATGTINVLRSDIGSIVFVSAVPENISILGTGGIESSVVKFRVLDKNSNFVSNQNVKFNLN TGVGGVKLAPLEATTNNEGLVQTVVTTGTVATSLRVTATVDDNSIPAISSQSSQLIISTGIPDQDSFSLSAQILNAEGWD RDGSEVLVTARLADAFNNPVPNGTTVSFTTEGGSIEDACQTIKGACTVKWTSQLPRPLGEVLIDGAGIQIRDPKAGMIPD PALGIYGNFYGQKYGGRATITATAIGEESFPDLNGNGRFDASEMTTFLTGKDVTGQSFDLNDAFNDYNEDGIFNPQQGSG QIGGELEELIDFNSNGVFDLKDHKYNGVLCSDPVHAGCADGVSNEKSLYVRRSLVIVMSGSAAYATNDNDIKIIDQELVD GVDADGKPTTVLVAREHLGGSIQIYGKGTASASFTLSDLHNQQLPAGSVVTFVASAGSVTSANQYIWPSSNHNGGRDFTV SLKGEDKPNSGTLLVTVTTPNNVVTEVLSIAVNIL
Sequences:
>Translated_835_residues MKSAYKVFLAGLCSFFLIACGGGGSISNDGGTTPTPGVVTVTMGISNIDISAIAPAEVTAKVVDSKLGPLAGILVTFSLS DSNIGSFTPSIGTALTDVNGVASITLVTATIAGAGTVSAKLDSGESGKIGFNMKGDGGVAGGGAQVSLVLTDANGAPIQS ISTLSPGKLVATVTGIKKPTIVTFSSPIGDLPIKTAVTNAQGKATVDIYAGSALGAGEVMASLVTGEVGNTIVVVGATNV VMGSGNPFVKGKAAVSSTTVSAGGTATISVLIQDDLGNAFTQPVDVNFSSTCATKIPAQAQISSPVSSSNGVATSTYLAQ GCVGEDQINVTANAGGISLSATGTINVLRSDIGSIVFVSAVPENISILGTGGIESSVVKFRVLDKNSNFVSNQNVKFNLN TGVGGVKLAPLEATTNNEGLVQTVVTTGTVATSLRVTATVDDNSIPAISSQSSQLIISTGIPDQDSFSLSAQILNAEGWD RDGSEVLVTARLADAFNNPVPNGTTVSFTTEGGSIEDACQTIKGACTVKWTSQLPRPLGEVLIDGAGIQIRDPKAGMIPD PALGIYGNFYGQKYGGRATITATAIGEESFPDLNGNGRFDASEMTTFLTGKDVTGQSFDLNDAFNDYNEDGIFNPQQGSG QIGGELEELIDFNSNGVFDLKDHKYNGVLCSDPVHAGCADGVSNEKSLYVRRSLVIVMSGSAAYATNDNDIKIIDQELVD GVDADGKPTTVLVAREHLGGSIQIYGKGTASASFTLSDLHNQQLPAGSVVTFVASAGSVTSANQYIWPSSNHNGGRDFTV SLKGEDKPNSGTLLVTVTTPNNVVTEVLSIAVNIL >Mature_835_residues MKSAYKVFLAGLCSFFLIACGGGGSISNDGGTTPTPGVVTVTMGISNIDISAIAPAEVTAKVVDSKLGPLAGILVTFSLS DSNIGSFTPSIGTALTDVNGVASITLVTATIAGAGTVSAKLDSGESGKIGFNMKGDGGVAGGGAQVSLVLTDANGAPIQS ISTLSPGKLVATVTGIKKPTIVTFSSPIGDLPIKTAVTNAQGKATVDIYAGSALGAGEVMASLVTGEVGNTIVVVGATNV VMGSGNPFVKGKAAVSSTTVSAGGTATISVLIQDDLGNAFTQPVDVNFSSTCATKIPAQAQISSPVSSSNGVATSTYLAQ GCVGEDQINVTANAGGISLSATGTINVLRSDIGSIVFVSAVPENISILGTGGIESSVVKFRVLDKNSNFVSNQNVKFNLN TGVGGVKLAPLEATTNNEGLVQTVVTTGTVATSLRVTATVDDNSIPAISSQSSQLIISTGIPDQDSFSLSAQILNAEGWD RDGSEVLVTARLADAFNNPVPNGTTVSFTTEGGSIEDACQTIKGACTVKWTSQLPRPLGEVLIDGAGIQIRDPKAGMIPD PALGIYGNFYGQKYGGRATITATAIGEESFPDLNGNGRFDASEMTTFLTGKDVTGQSFDLNDAFNDYNEDGIFNPQQGSG QIGGELEELIDFNSNGVFDLKDHKYNGVLCSDPVHAGCADGVSNEKSLYVRRSLVIVMSGSAAYATNDNDIKIIDQELVD GVDADGKPTTVLVAREHLGGSIQIYGKGTASASFTLSDLHNQQLPAGSVVTFVASAGSVTSANQYIWPSSNHNGGRDFTV SLKGEDKPNSGTLLVTVTTPNNVVTEVLSIAVNIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84880; Mature: 84880
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAYKVFLAGLCSFFLIACGGGGSISNDGGTTPTPGVVTVTMGISNIDISAIAPAEVTA CCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHHH KVVDSKLGPLAGILVTFSLSDSNIGSFTPSIGTALTDVNGVASITLVTATIAGAGTVSAK HHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCEEEEE LDSGESGKIGFNMKGDGGVAGGGAQVSLVLTDANGAPIQSISTLSPGKLVATVTGIKKPT ECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCEEEEEECCCCCE IVTFSSPIGDLPIKTAVTNAQGKATVDIYAGSALGAGEVMASLVTGEVGNTIVVVGATNV EEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCEE VMGSGNPFVKGKAAVSSTTVSAGGTATISVLIQDDLGNAFTQPVDVNFSSTCATKIPAQA EEECCCCEEECCEEEEEEEECCCCCEEEEEEEECCCCCHHCCCEECCCCCCCCCCCCCCC QISSPVSSSNGVATSTYLAQGCVGEDQINVTANAGGISLSATGTINVLRSDIGSIVFVSA EECCCCCCCCCCEEEHHHHHCCCCCCEEEEEECCCCEEEECCCCHHHHHHCCCCEEEEEE VPENISILGTGGIESSVVKFRVLDKNSNFVSNQNVKFNLNTGVGGVKLAPLEATTNNEGL CCCCEEEEECCCCCCCEEEEEEEECCCCEECCCCEEEEECCCCCCEEEEEEEECCCCCCE VQTVVTTGTVATSLRVTATVDDNSIPAISSQSSQLIISTGIPDQDSFSLSAQILNAEGWD EEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCC RDGSEVLVTARLADAFNNPVPNGTTVSFTTEGGSIEDACQTIKGACTVKWTSQLPRPLGE CCCCEEEEEEEEHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEHHHCCHHHHH VLIDGAGIQIRDPKAGMIPDPALGIYGNFYGQKYGGRATITATAIGEESFPDLNGNGRFD HEECCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC ASEMTTFLTGKDVTGQSFDLNDAFNDYNEDGIFNPQQGSGQIGGELEELIDFNSNGVFDL HHHHEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEE KDHKYNGVLCSDPVHAGCADGVSNEKSLYVRRSLVIVMSGSAAYATNDNDIKIIDQELVD CCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEECCCCEEEEEHHHHC GVDADGKPTTVLVAREHLGGSIQIYGKGTASASFTLSDLHNQQLPAGSVVTFVASAGSVT CCCCCCCCCEEEEEEHHCCCEEEEEECCCCCCEEEHHHHCCCCCCCCCEEEEEECCCCCC SANQYIWPSSNHNGGRDFTVSLKGEDKPNSGTLLVTVTTPNNVVTEVLSIAVNIL CCCEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure MKSAYKVFLAGLCSFFLIACGGGGSISNDGGTTPTPGVVTVTMGISNIDISAIAPAEVTA CCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHHH KVVDSKLGPLAGILVTFSLSDSNIGSFTPSIGTALTDVNGVASITLVTATIAGAGTVSAK HHHHHCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCCCEEEEE LDSGESGKIGFNMKGDGGVAGGGAQVSLVLTDANGAPIQSISTLSPGKLVATVTGIKKPT ECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCEEEEEECCCCCE IVTFSSPIGDLPIKTAVTNAQGKATVDIYAGSALGAGEVMASLVTGEVGNTIVVVGATNV EEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCEE VMGSGNPFVKGKAAVSSTTVSAGGTATISVLIQDDLGNAFTQPVDVNFSSTCATKIPAQA EEECCCCEEECCEEEEEEEECCCCCEEEEEEEECCCCCHHCCCEECCCCCCCCCCCCCCC QISSPVSSSNGVATSTYLAQGCVGEDQINVTANAGGISLSATGTINVLRSDIGSIVFVSA EECCCCCCCCCCEEEHHHHHCCCCCCEEEEEECCCCEEEECCCCHHHHHHCCCCEEEEEE VPENISILGTGGIESSVVKFRVLDKNSNFVSNQNVKFNLNTGVGGVKLAPLEATTNNEGL CCCCEEEEECCCCCCCEEEEEEEECCCCEECCCCEEEEECCCCCCEEEEEEEECCCCCCE VQTVVTTGTVATSLRVTATVDDNSIPAISSQSSQLIISTGIPDQDSFSLSAQILNAEGWD EEEEEECCEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCC RDGSEVLVTARLADAFNNPVPNGTTVSFTTEGGSIEDACQTIKGACTVKWTSQLPRPLGE CCCCEEEEEEEEHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEHHHCCHHHHH VLIDGAGIQIRDPKAGMIPDPALGIYGNFYGQKYGGRATITATAIGEESFPDLNGNGRFD HEECCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC ASEMTTFLTGKDVTGQSFDLNDAFNDYNEDGIFNPQQGSGQIGGELEELIDFNSNGVFDL HHHHEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEE KDHKYNGVLCSDPVHAGCADGVSNEKSLYVRRSLVIVMSGSAAYATNDNDIKIIDQELVD CCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEECCCCEEEEEHHHHC GVDADGKPTTVLVAREHLGGSIQIYGKGTASASFTLSDLHNQQLPAGSVVTFVASAGSVT CCCCCCCCCEEEEEEHHCCCEEEEEECCCCCCEEEHHHHCCCCCCCCCEEEEEECCCCCC SANQYIWPSSNHNGGRDFTVSLKGEDKPNSGTLLVTVTTPNNVVTEVLSIAVNIL CCCEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA