| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is yebT [H]
Identifier: 126174666
GI number: 126174666
Start: 2864164
End: 2866803
Strand: Direct
Name: yebT [H]
Synonym: Sbal_2453
Alternate gene names: 126174666
Gene position: 2864164-2866803 (Clockwise)
Preceding gene: 126174665
Following gene: 126174668
Centisome position: 55.86
GC content: 47.99
Gene sequence:
>2640_bases ATGACACAAATTGAATCGCCGAAAGTTGTAAAGAAAAAACTCTTTTCGCCCATTTGGCTACTGCCTATTGTCGCGTTGGC ATTGGGTGCGTGGCTGGGCATTAAGAGTATTAAAGAATCGGGCGTTGAAATTCAAATTCACTTTCCGAGCGCAACTGGGA TTGACGTAGGTAAAACCTTAGTCAAATACCAAGGCTTGACTGTCGGTAAAGTCAAAGACATAGGAATAGATGAAGATCTC AAGGGTGTAAACGTTAAAGTCATGATGGACTACCGTGCTAAGCCTTTCTTAAATAAAGAGACCCTCTTCTGGCTTGTCAC CCCTAAGGCCAGTATCACAGGTGTTGAAGGTTTAGATGCGTTGTTCTCAGGTAACTACATCGCGATTCAACCGGGTAAAG GTAATGCGTCAACATTTTTTGAAGCAGAACGCCAACCGCCGCCGATGCAAATCGGCTCAGAAGGTGTGATGGTCGAACTG ACCTCAGACAAACTCGGTTCGTTGGATGTTGGCTCGCCAATATTTTTCCGCCAAATCCCTGTGGGCAGTGTGGTCAGCTA TCGTTTAGATGGCAATCAAAGAGTCATCATCAGCGCCTTCATTCAAGAGCAATACGCGCGATTAGTGAAGAAAAACTCTC ACTTTTGGAATGTCTCCGGCGTAAAAATTGATGCATCACTGACTGGGGTTAAAGTCAGCTCTGAGAGTTTGGCATCCATT CTGGCTGGCGGCGTGAGTTTTAGCTCTGACGATAAAGCGGATATTGCCAAAAACGGTGACATTTTTTCGCTTTATGATTC AGAAACCACAGCCCTTGGCGGCATAGAAATAAACCTGACCATGGCTGATGCTAACGGTGTCGACAAAGGCACTCGTATTG TTTATCGCGGCATCAATATCGGCAGCATTTTAAGCAAGCAACTCACCGCGAATGGCGTAATAGCCGTGGCTAAGTTTGAA CCTCAATACGGTTCACTGTTAACTAACGACGGGGTGTTTTGGCTTGAAGGTGCCGATATTTCCCTCTCAGGCATTAAAAA TCCAGAGCGTTTACTAACGGGCAGCGTGATCAACTTCCTGCCGGGCATTAATACAAAAACGGCGATGCCAAGCAGTTTTG CCTTACAAGCCAAAGCGCCTGATTTACTGCAATCAAAGAAGCGTTTCTTGACCTTAACCTCAGCCGAAAACATGGGTATT TCAGCGGGCGCTGAAGTTCGCTTTAAGCAAATCCCTATTGGCTCAGTGCTTGCGGTTAAGTTAACCAAAGATTTATCGGC GGTGGAATACCAACTCGAGTTACAACCTGAGTTTGCTAGCCTAATTCGCAGCGACAGCTATTTTGTCCCTGAGTCGGCAT TAACAGTAAAAGCATCACTAGAGGGCGTGTCAGTCAAAGCAAGGGATTTTACGACGCTCACTCAAGGTGCGGTTAGCTTG ATCCAAGGCCACAGCGATACGCCACTCGCCGCCAACAGCGCCCTCACCTTGTTTAGCTCAGTGGATGCCGCGACAGCCTT TTATGATCGCCAGCAACAAGTGCATCTGACCTTAATCAGTCAAGATGGCGCCGATGTCAGCCAAGGCTCACCGATTTACT ATAAAAAGATGCAAATTGGGACAGTTGACTCAGTGAACTGGCAAAGTAAGACCGAAGACTTTGCTATCAAGCTCGCTATC GACAAACAATTCCAGCCCTTGCTGAAAAAGCCGAATGTGTTCTGGCGTAACAGCGCCGTGGATATCAGCGCCAGTCTTGC GGGCATTGATGTTGCGGTCGCGCCGCTTCAAGGAGCATTAAAGGGCAGCATCAGTCTGGGATTGCTTGATAGCAATGGCA AAGCCAGCAATACAGCTAACTTAAAACTCTATGAGAGCAAGCAGTTGGCATTAACGCAGGCGCAGGCAATTCGCCTCACC TTACCCGCTTCAAGTAAACTGACGGCCAAAGCAGCGATTCGCTATCAAGGTCATCAAGTGGGTGAAGTGTCGCAGGTGAA GCTCAATGCCGATCTCAATACACTCACTGCAACGGCCTATCTCTACGGCGAATACGCCGAACATTTCAGCCGCAGCGACT GTGAATATCATCTAGTGGATGCGCAAATTTCTCTAGCAGGAATTAAAGCACCAGAAACCTTGATCACTGGCCCTTACATC GGTGTGCTACCGGGTACAAGCAGTCAAAAAGCGACCCAGTTTGTTGCCAACCTCGCTGCCAGCAGCTATGCCAACGTTGC CGAAGATGCGCTAAAATTCACCTTAGAAGATAACAACTTAGGCTCGATGAAAGTCGGCACACCTATCTTCTTCCGTGGTA TCAAAGTCGGTCAAATCGATGGTTATCACCTGTCGACACAGGGCAATAGCGTGCTGATGCAGGCCCATATCGAGCCGCAG TACAGTCACTTAGTGAATCAGAGCAGTCAGTTCTGGGATGCTTCAGGGATTAAAGTCGATGTTGGCCTCTTTTCAGGTGC GCAAATCGAAGCGGGCTCGCTGGAAACCTTACTCGCTGGCGGCATTAATGTTGCGACTAAGGACACGACTCAAGAGGGTA ATCGTTTAGCAGCAGGAACAGTATTAAGATTGCAACACAAAGCCGAAAACGAATGGCAGGAATGGGCACCCGCCCAGTAA
Upstream 100 bases:
>100_bases GCGCCTGCCGCGACCGCATTTGCCTTGGTTATTCTGTTAACTCAGTTAGCCGCAAAAGTGTTAGACACTCGTTTACTCTG GGATCGATTGGAACCTCAAG
Downstream 100 bases:
>100_bases TTCTTTTCTTCAAAATACTTACACCAACGCACTAATATTAAAGCTCTTAAAAGTCAATCAGGCGCATTATACGCCTGATT GATTTTTAGCTTCTCGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 879; Mature: 878
Protein sequence:
>879_residues MTQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDIGIDEDL KGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVEL TSDKLGSLDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASI LAGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGVDKGTRIVYRGINIGSILSKQLTANGVIAVAKFE PQYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFLPGINTKTAMPSSFALQAKAPDLLQSKKRFLTLTSAENMGI SAGAEVRFKQIPIGSVLAVKLTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLEGVSVKARDFTTLTQGAVSL IQGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIGTVDSVNWQSKTEDFAIKLAI DKQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGALKGSISLGLLDSNGKASNTANLKLYESKQLALTQAQAIRLT LPASSKLTAKAAIRYQGHQVGEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPETLITGPYI GVLPGTSSQKATQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQIDGYHLSTQGNSVLMQAHIEPQ YSHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAGGINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ
Sequences:
>Translated_879_residues MTQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDIGIDEDL KGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVEL TSDKLGSLDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASI LAGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGVDKGTRIVYRGINIGSILSKQLTANGVIAVAKFE PQYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFLPGINTKTAMPSSFALQAKAPDLLQSKKRFLTLTSAENMGI SAGAEVRFKQIPIGSVLAVKLTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLEGVSVKARDFTTLTQGAVSL IQGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIGTVDSVNWQSKTEDFAIKLAI DKQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGALKGSISLGLLDSNGKASNTANLKLYESKQLALTQAQAIRLT LPASSKLTAKAAIRYQGHQVGEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPETLITGPYI GVLPGTSSQKATQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQIDGYHLSTQGNSVLMQAHIEPQ YSHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAGGINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ >Mature_878_residues TQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDIGIDEDLK GVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVELT SDKLGSLDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASIL AGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGVDKGTRIVYRGINIGSILSKQLTANGVIAVAKFEP QYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFLPGINTKTAMPSSFALQAKAPDLLQSKKRFLTLTSAENMGIS AGAEVRFKQIPIGSVLAVKLTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLEGVSVKARDFTTLTQGAVSLI QGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIGTVDSVNWQSKTEDFAIKLAID KQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGALKGSISLGLLDSNGKASNTANLKLYESKQLALTQAQAIRLTL PASSKLTAKAAIRYQGHQVGEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPETLITGPYIG VLPGTSSQKATQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQIDGYHLSTQGNSVLMQAHIEPQY SHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAGGINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=887, Percent_Identity=33.7091319052988, Blast_Score=450, Evalue=1e-127, Organism=Escherichia coli, GI1787184, Length=307, Percent_Identity=33.8762214983713, Blast_Score=169, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 94276; Mature: 94145
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTL CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH VKYQGLTVGKVKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDA HHHCCCEEECEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHH LFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVELTSDKLGSLDVGSPIFFRQIP HHCCCEEEEECCCCCCCCEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEEECC VGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASI CCCEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCEEEECCEEEECEEEEEEECHHHHHHH LAGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGVDKGTRIVYRGINI HHCCCCCCCCCCCHHCCCCCEEEEECCCCEEECCEEEEEEEECCCCCCCCCEEEEECCCH GSILSKQLTANGVIAVAKFEPQYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFL HHHHHHHHCCCCEEEEEEECCCCCCEEECCCEEEEECCCEEECCCCCHHHHHHHHHHHHC PGINTKTAMPSSFALQAKAPDLLQSKKRFLTLTSAENMGISAGAEVRFKQIPIGSVLAVK CCCCCCCCCCCCEEEECCCCHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEE LTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLEGVSVKARDFTTLTQGAVSL EECCCCEEEEEEEECHHHHHHHCCCCEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHH IQGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIG HCCCCCCCCCCCCCEEEEHHCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEC TVDSVNWQSKTEDFAIKLAIDKQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGAL CCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCEEEECCCEEEEEEECCCEEEEECCCCCC KGSISLGLLDSNGKASNTANLKLYESKQLALTQAQAIRLTLPASSKLTAKAAIRYQGHQV CCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCC GEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPETLITGPYI CCEEEEEEECCCCEEEEEEEEEHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEEECCEE GVLPGTSSQKATQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQID EEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECCCCEEEECEEEECCC GYHLSTQGNSVLMQAHIEPQYSHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAG CEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHC GINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ CCEEEECCCCCCCCEEEEEEEEEEEHHCCCCHHHCCCCC >Mature Secondary Structure TQIESPKVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGVEIQIHFPSATGIDVGKTL CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHH VKYQGLTVGKVKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDA HHHCCCEEECEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHH LFSGNYIAIQPGKGNASTFFEAERQPPPMQIGSEGVMVELTSDKLGSLDVGSPIFFRQIP HHCCCEEEEECCCCCCCCEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCCCEEEEECC VGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFWNVSGVKIDASLTGVKVSSESLASI CCCEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCEEEECCEEEECEEEEEEECHHHHHHH LAGGVSFSSDDKADIAKNGDIFSLYDSETTALGGIEINLTMADANGVDKGTRIVYRGINI HHCCCCCCCCCCCHHCCCCCEEEEECCCCEEECCEEEEEEEECCCCCCCCCEEEEECCCH GSILSKQLTANGVIAVAKFEPQYGSLLTNDGVFWLEGADISLSGIKNPERLLTGSVINFL HHHHHHHHCCCCEEEEEEECCCCCCEEECCCEEEEECCCEEECCCCCHHHHHHHHHHHHC PGINTKTAMPSSFALQAKAPDLLQSKKRFLTLTSAENMGISAGAEVRFKQIPIGSVLAVK CCCCCCCCCCCCEEEECCCCHHHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEE LTKDLSAVEYQLELQPEFASLIRSDSYFVPESALTVKASLEGVSVKARDFTTLTQGAVSL EECCCCEEEEEEEECHHHHHHHCCCCEECCCCCEEEEEECCCEEEEECCCHHHHHHHHHH IQGHSDTPLAANSALTLFSSVDAATAFYDRQQQVHLTLISQDGADVSQGSPIYYKKMQIG HCCCCCCCCCCCCCEEEEHHCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEC TVDSVNWQSKTEDFAIKLAIDKQFQPLLKKPNVFWRNSAVDISASLAGIDVAVAPLQGAL CCCCCCCCCCCCCEEEEEEECCCHHHHHHCCCEEEECCCEEEEEEECCCEEEEECCCCCC KGSISLGLLDSNGKASNTANLKLYESKQLALTQAQAIRLTLPASSKLTAKAAIRYQGHQV CCCEEEEEEECCCCCCCEEEEEEEECCCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCC GEVSQVKLNADLNTLTATAYLYGEYAEHFSRSDCEYHLVDAQISLAGIKAPETLITGPYI CCEEEEEEECCCCEEEEEEEEEHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEEECCEE GVLPGTSSQKATQFVANLAASSYANVAEDALKFTLEDNNLGSMKVGTPIFFRGIKVGQID EEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECCCCEEEECEEEECCC GYHLSTQGNSVLMQAHIEPQYSHLVNQSSQFWDASGIKVDVGLFSGAQIEAGSLETLLAG CEEEECCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCEEEEEECCCCEEECCCHHHHHHC GINVATKDTTQEGNRLAAGTVLRLQHKAENEWQEWAPAQ CCEEEECCCCCCCCEEEEEEEEEEEHHCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]