| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174504
Identifier: 126174504
GI number: 126174504
Start: 2658499
End: 2661321
Strand: Direct
Name: 126174504
Synonym: Sbal_2288
Alternate gene names: NA
Gene position: 2658499-2661321 (Clockwise)
Preceding gene: 126174499
Following gene: 126174505
Centisome position: 51.85
GC content: 42.86
Gene sequence:
>2823_bases ATGATGCGATTTAAACCCAGTTTGCTAACCTTAGCGCTCATTGCCGCAGGTGCGAGTATGCACTCCTATGCGGCAGATGA AGTGACCACAGATAAAGAAGCGAAAGCGAAAGAAGCTGCAATTGAAGTTATTGAAGTAAAAGGTTTTAGAACCAGTGTCA TCAAGTCATTAAATGATAAACGTTTTGGAGATACCGTCTCTGAATCGATTTCAGCCGATGATCTTGGCGCCCTTCCCGAC CAGTCAATTGCTGATGCGTTAACTCGTTTACCCGGCGTGACTGCAGTCCGTACTGGTGGACAAGCAAGCGGCCTCAACAT TCGTGGTCTTGATGGTGATTTTGTCTTTGCAACACTTAACGGACATGAACAAGTTACTACGGGTGGTAAACGCGCGATTG AGTTTGACCAATACCCATCAGAATTGATTAGCCAAGCCGCAGTATATAAAACGCCTAAGGCCTCGCTCATTGAAGGTGGC GTTGCTGGTACTGTAGAGTTAAAAACCGCAGATCCACTAAAAAGCGACAAAGACCAATCATTTAATATCAATGCTCGCGG CAGTTTTAATGACAGAGCCGATGAAATCTCTGATGCCGAGCAGTATGGCAATCGCCTCAGCTTAGCCTATCAAGGCAAAT TCCTAGAAGACACGCTCGGTGTGGCGCTAGGCTATGCCCACCTTTATCAACCTTATGTTGCAAGTCAGTTCATTGGCTTA CGTTTCAACGATGATAAAAAAGATGTCAATGGCGACGGTGTTGCCGAATCAATCAGTGAAGGTTTTGAATTACAGCAAAA AGGCGGTGATGATACACGTGATGGTTATATGGCGGCTATCCATTGGCAACCGACAGACAGCCTCAGTGTAAAAGGTGATT TATTCCATTCAAAATTCACTTCCGAAAACTTTGCCCGTGGCTTTCGCGTTAAGTCATTAAAAAACGGCACGATCAGTGAT GCAGTTGTCGAAAATGGCTCTATGACTGGCGGAACCGTATCAACCGATGGCAATGATAACTTTGCCGTTTTTGTTATCAA TGATAACGACTCAAAGTATTCAGAACTGACGTCTGGCTCAATCAATGTTGAGTGGAATAATGGCGGCGCCTTAACGGTTG CGGCTGACGTTAGCTATTCAAAAGCCGATGGCGAATTCGTCAACGGTGGTACGCGTGCCGTGTTATATGATGATTTAGGT AATGAAGTACGTTCAGCCGAATCAATTAATTATCAACTACATGGCTTAAACCCTGCCGATGTTAATTTCTCAAACGACTA TACCAATACGGCAACCTTGGGTTTAAAAGAAGTGGGTATGTGGCCATACGATCAGCAAAATGATCTTGTCGCCTATAAGT TAGATTTTAACTACGTGTTAGATTCTAGTTTCTTATCTTCTGTCGATTTTGGTCTGCGCTACTCGCAGCGTGAGTTTAAT GCGCAACGTTCACAAGCGGGATATGGTTTTGAATTTGGTAAAAACCCAACTAATCAACCTGTGCTTCAAATGAACACTGA CATGACAAATGTCGTTAACTTTGGCGGAGAATTGTCTGGCTACCCGAACTTCCTTTCCGTTGATTTCAACAAAGCCATTG AACTGGTTAACGCACAGTTAGCCGCGACAGGGCAATCTCCTTTTACCCCAACGGCCAATTGGTCTAATAACTGGACCATG ATCCAAAGTGGTTCGGTTAATGAAGACGTACTAGCAGGTTATGTTCAGGGTAATCTTGATTTTGACTTAGGTGATATTAA AGTCACGGGTAACGTGGGTGTGCGTGTTGTGCACACAGACCAAAGCAGTAAAGGTCTACAACAAGTTGGCTATGGTCTAG GTGAAGCGATTACCGATGAACTTGGCGTGATCAGTAACGACTATATTCGTAACGAGATAGGTAAAACCTATACCGATTAC TTGCCGTCGATTAACTTGAGCTTCCACCTCACTGAAAATGATCAACTTCGTTTTGCTGCAGCTTCTGTGATGTCACGTCC TCCAATCGACAAGCTGAAATCAGGCATGGGATCTTGGTATGACGATTCAGCCACACCGGGATACAAAAAATACAATGCTT GGGGTAATACCAGTCCGCTACTTGATCCATTTTATGCCGATCAATACGACTTATCTTACGAGCACTATTTTGAAGATTCA CAGGGTGCAGTTGTCGTAGCCTTGTTCTACAAAGATATTAAATCCTTTATCAACAACTTCACAATCCAACCTTATGACTT TGAAGGTAATGGATTTATTGTTCCCGATACTATTGTCGATAATGGTGTTGAGTTCCCAGTGGTGAAAGATGAAGGTCAAT ATCAAACTGCAATCAACAACGACAATGGCGGCTATATTCGTGGTGTTGAGTTAGGTTATACCCAAGTCTTTGATTTCCTA CCATCACCTCTCAGTGGTCTTGGCTTCACTGGTAGCTACTCGTATTCAGACAGTGAAGTGGAATTTACAACAGATTTAAG TGGTTCAAACTTAACAATTCCATTACCAGGTTTATCAGAAAGCGTACTGAACACAACCCTTTTCTATTCACTAGATGGTT TCGATACTCGCGTCAGCATGAGATATCGTAGCAGCTACGTTTCAGAACAAGTGGCAGTTGAATCACAACTCGCCTTCTTC GATGCCGAAACGATTGTGGATTATCAAGCTTCATACGCTCTGGAAAATGGACTTAAGTTCTTATTCCAAATTAATAACTT AACTGATGAACCAAACAAAACCTATTTTGGTGAAGAACATCAGACAGGAACAATCCAATACTTCGGTAGACAGTACTTCC TAGGGTTAAGTTACTCTTTATAA
Upstream 100 bases:
>100_bases ATTAAGCGCTTAGATACCAAAAAAAGGCCGCAAACATAACGCGGTGATAACGATAAAACGCTCTACAAAGCGATAAAGCG ACTCCAAGGGGAAGAGAGAT
Downstream 100 bases:
>100_bases GTTACCCAGAATAAAGCCTGCTTCAATTAAGAAGCAGGCTTTTGCTTATGTAGATTTCAGCGATGTTAAACTTCATCATG CCAGCGCATTTTACTTCTCT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor-Related Protein; Outer Membrane Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Protein; NB-Dependent Receptor Subfamily Protein; Nucleoside Diphosphate Kinase; Nb-Dependent Outer Membrane Receptor Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB Dependent Receptor; NB-Dependent Maltose Outer Membrane Transporter MalA; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; 3-Dehydroquinate Synthase; DEAD/DEAH Box Helicase-Like; NB Dependent Receptor Protein; NB Domain-Containing Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase
Number of amino acids: Translated: 940; Mature: 940
Protein sequence:
>940_residues MMRFKPSLLTLALIAAGASMHSYAADEVTTDKEAKAKEAAIEVIEVKGFRTSVIKSLNDKRFGDTVSESISADDLGALPD QSIADALTRLPGVTAVRTGGQASGLNIRGLDGDFVFATLNGHEQVTTGGKRAIEFDQYPSELISQAAVYKTPKASLIEGG VAGTVELKTADPLKSDKDQSFNINARGSFNDRADEISDAEQYGNRLSLAYQGKFLEDTLGVALGYAHLYQPYVASQFIGL RFNDDKKDVNGDGVAESISEGFELQQKGGDDTRDGYMAAIHWQPTDSLSVKGDLFHSKFTSENFARGFRVKSLKNGTISD AVVENGSMTGGTVSTDGNDNFAVFVINDNDSKYSELTSGSINVEWNNGGALTVAADVSYSKADGEFVNGGTRAVLYDDLG NEVRSAESINYQLHGLNPADVNFSNDYTNTATLGLKEVGMWPYDQQNDLVAYKLDFNYVLDSSFLSSVDFGLRYSQREFN AQRSQAGYGFEFGKNPTNQPVLQMNTDMTNVVNFGGELSGYPNFLSVDFNKAIELVNAQLAATGQSPFTPTANWSNNWTM IQSGSVNEDVLAGYVQGNLDFDLGDIKVTGNVGVRVVHTDQSSKGLQQVGYGLGEAITDELGVISNDYIRNEIGKTYTDY LPSINLSFHLTENDQLRFAAASVMSRPPIDKLKSGMGSWYDDSATPGYKKYNAWGNTSPLLDPFYADQYDLSYEHYFEDS QGAVVVALFYKDIKSFINNFTIQPYDFEGNGFIVPDTIVDNGVEFPVVKDEGQYQTAINNDNGGYIRGVELGYTQVFDFL PSPLSGLGFTGSYSYSDSEVEFTTDLSGSNLTIPLPGLSESVLNTTLFYSLDGFDTRVSMRYRSSYVSEQVAVESQLAFF DAETIVDYQASYALENGLKFLFQINNLTDEPNKTYFGEEHQTGTIQYFGRQYFLGLSYSL
Sequences:
>Translated_940_residues MMRFKPSLLTLALIAAGASMHSYAADEVTTDKEAKAKEAAIEVIEVKGFRTSVIKSLNDKRFGDTVSESISADDLGALPD QSIADALTRLPGVTAVRTGGQASGLNIRGLDGDFVFATLNGHEQVTTGGKRAIEFDQYPSELISQAAVYKTPKASLIEGG VAGTVELKTADPLKSDKDQSFNINARGSFNDRADEISDAEQYGNRLSLAYQGKFLEDTLGVALGYAHLYQPYVASQFIGL RFNDDKKDVNGDGVAESISEGFELQQKGGDDTRDGYMAAIHWQPTDSLSVKGDLFHSKFTSENFARGFRVKSLKNGTISD AVVENGSMTGGTVSTDGNDNFAVFVINDNDSKYSELTSGSINVEWNNGGALTVAADVSYSKADGEFVNGGTRAVLYDDLG NEVRSAESINYQLHGLNPADVNFSNDYTNTATLGLKEVGMWPYDQQNDLVAYKLDFNYVLDSSFLSSVDFGLRYSQREFN AQRSQAGYGFEFGKNPTNQPVLQMNTDMTNVVNFGGELSGYPNFLSVDFNKAIELVNAQLAATGQSPFTPTANWSNNWTM IQSGSVNEDVLAGYVQGNLDFDLGDIKVTGNVGVRVVHTDQSSKGLQQVGYGLGEAITDELGVISNDYIRNEIGKTYTDY LPSINLSFHLTENDQLRFAAASVMSRPPIDKLKSGMGSWYDDSATPGYKKYNAWGNTSPLLDPFYADQYDLSYEHYFEDS QGAVVVALFYKDIKSFINNFTIQPYDFEGNGFIVPDTIVDNGVEFPVVKDEGQYQTAINNDNGGYIRGVELGYTQVFDFL PSPLSGLGFTGSYSYSDSEVEFTTDLSGSNLTIPLPGLSESVLNTTLFYSLDGFDTRVSMRYRSSYVSEQVAVESQLAFF DAETIVDYQASYALENGLKFLFQINNLTDEPNKTYFGEEHQTGTIQYFGRQYFLGLSYSL >Mature_940_residues MMRFKPSLLTLALIAAGASMHSYAADEVTTDKEAKAKEAAIEVIEVKGFRTSVIKSLNDKRFGDTVSESISADDLGALPD QSIADALTRLPGVTAVRTGGQASGLNIRGLDGDFVFATLNGHEQVTTGGKRAIEFDQYPSELISQAAVYKTPKASLIEGG VAGTVELKTADPLKSDKDQSFNINARGSFNDRADEISDAEQYGNRLSLAYQGKFLEDTLGVALGYAHLYQPYVASQFIGL RFNDDKKDVNGDGVAESISEGFELQQKGGDDTRDGYMAAIHWQPTDSLSVKGDLFHSKFTSENFARGFRVKSLKNGTISD AVVENGSMTGGTVSTDGNDNFAVFVINDNDSKYSELTSGSINVEWNNGGALTVAADVSYSKADGEFVNGGTRAVLYDDLG NEVRSAESINYQLHGLNPADVNFSNDYTNTATLGLKEVGMWPYDQQNDLVAYKLDFNYVLDSSFLSSVDFGLRYSQREFN AQRSQAGYGFEFGKNPTNQPVLQMNTDMTNVVNFGGELSGYPNFLSVDFNKAIELVNAQLAATGQSPFTPTANWSNNWTM IQSGSVNEDVLAGYVQGNLDFDLGDIKVTGNVGVRVVHTDQSSKGLQQVGYGLGEAITDELGVISNDYIRNEIGKTYTDY LPSINLSFHLTENDQLRFAAASVMSRPPIDKLKSGMGSWYDDSATPGYKKYNAWGNTSPLLDPFYADQYDLSYEHYFEDS QGAVVVALFYKDIKSFINNFTIQPYDFEGNGFIVPDTIVDNGVEFPVVKDEGQYQTAINNDNGGYIRGVELGYTQVFDFL PSPLSGLGFTGSYSYSDSEVEFTTDLSGSNLTIPLPGLSESVLNTTLFYSLDGFDTRVSMRYRSSYVSEQVAVESQLAFF DAETIVDYQASYALENGLKFLFQINNLTDEPNKTYFGEEHQTGTIQYFGRQYFLGLSYSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102878; Mature: 102878
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRFKPSLLTLALIAAGASMHSYAADEVTTDKEAKAKEAAIEVIEVKGFRTSVIKSLNDK CCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHEEEEEEECCHHHHHHHHCCCC RFGDTVSESISADDLGALPDQSIADALTRLPGVTAVRTGGQASGLNIRGLDGDFVFATLN CCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCEEEEEEC GHEQVTTGGKRAIEFDQYPSELISQAAVYKTPKASLIEGGVAGTVELKTADPLKSDKDQS CCCEECCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCCCCC FNINARGSFNDRADEISDAEQYGNRLSLAYQGKFLEDTLGVALGYAHLYQPYVASQFIGL EEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHEEEE RFNDDKKDVNGDGVAESISEGFELQQKGGDDTRDGYMAAIHWQPTDSLSVKGDLFHSKFT EECCCCCCCCCCHHHHHHHHCCEEHHCCCCCCCCCEEEEEEECCCCCCEEECCHHHHHCC SENFARGFRVKSLKNGTISDAVVENGSMTGGTVSTDGNDNFAVFVINDNDSKYSELTSGS CCHHHCCEEEEECCCCCCCHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCHHHHHCCCE INVEWNNGGALTVAADVSYSKADGEFVNGGTRAVLYDDLGNEVRSAESINYQLHGLNPAD EEEEECCCCEEEEEEECCCCCCCCCEECCCEEEEEECCCCCHHHCCCCCEEEEECCCCCC VNFSNDYTNTATLGLKEVGMWPYDQQNDLVAYKLDFNYVLDSSFLSSVDFGLRYSQREFN CCCCCCCCCEEECCHHHHCCCCCCCCCCEEEEEEECCEEECHHHHHHHHHCCEECHHHHC AQRSQAGYGFEFGKNPTNQPVLQMNTDMTNVVNFGGELSGYPNFLSVDFNKAIELVNAQL CHHHCCCCCEECCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHE AATGQSPFTPTANWSNNWTMIQSGSVNEDVLAGYVQGNLDFDLGDIKVTGNVGVRVVHTD EECCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEECCCEEECCCEEEECCCCEEEEECC QSSKGLQQVGYGLGEAITDELGVISNDYIRNEIGKTYTDYLPSINLSFHLTENDQLRFAA CCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCCCEEEEECCCCCEEHHH ASVMSRPPIDKLKSGMGSWYDDSATPGYKKYNAWGNTSPLLDPFYADQYDLSYEHYFEDS HHHHCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHEECC QGAVVVALFYKDIKSFINNFTIQPYDFEGNGFIVPDTIVDNGVEFPVVKDEGQYQTAINN CCCEEEEHHHHHHHHHHHCCCCCEEEECCCCEECCCHHHCCCCCCEEECCCCCEEEEEEC DNGGYIRGVELGYTQVFDFLPSPLSGLGFTGSYSYSDSEVEFTTDLSGSNLTIPLPGLSE CCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCH SVLNTTLFYSLDGFDTRVSMRYRSSYVSEQVAVESQLAFFDAETIVDYQASYALENGLKF HHHCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHCCEE LFQINNLTDEPNKTYFGEEHQTGTIQYFGRQYFLGLSYSL EEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECC >Mature Secondary Structure MMRFKPSLLTLALIAAGASMHSYAADEVTTDKEAKAKEAAIEVIEVKGFRTSVIKSLNDK CCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHEEEEEEECCHHHHHHHHCCCC RFGDTVSESISADDLGALPDQSIADALTRLPGVTAVRTGGQASGLNIRGLDGDFVFATLN CCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCEEEEEEC GHEQVTTGGKRAIEFDQYPSELISQAAVYKTPKASLIEGGVAGTVELKTADPLKSDKDQS CCCEECCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCCCCCCCCCC FNINARGSFNDRADEISDAEQYGNRLSLAYQGKFLEDTLGVALGYAHLYQPYVASQFIGL EEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHEEEE RFNDDKKDVNGDGVAESISEGFELQQKGGDDTRDGYMAAIHWQPTDSLSVKGDLFHSKFT EECCCCCCCCCCHHHHHHHHCCEEHHCCCCCCCCCEEEEEEECCCCCCEEECCHHHHHCC SENFARGFRVKSLKNGTISDAVVENGSMTGGTVSTDGNDNFAVFVINDNDSKYSELTSGS CCHHHCCEEEEECCCCCCCHHHCCCCCCCCCEEECCCCCCEEEEEEECCCCHHHHHCCCE INVEWNNGGALTVAADVSYSKADGEFVNGGTRAVLYDDLGNEVRSAESINYQLHGLNPAD EEEEECCCCEEEEEEECCCCCCCCCEECCCEEEEEECCCCCHHHCCCCCEEEEECCCCCC VNFSNDYTNTATLGLKEVGMWPYDQQNDLVAYKLDFNYVLDSSFLSSVDFGLRYSQREFN CCCCCCCCCEEECCHHHHCCCCCCCCCCEEEEEEECCEEECHHHHHHHHHCCEECHHHHC AQRSQAGYGFEFGKNPTNQPVLQMNTDMTNVVNFGGELSGYPNFLSVDFNKAIELVNAQL CHHHCCCCCEECCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHE AATGQSPFTPTANWSNNWTMIQSGSVNEDVLAGYVQGNLDFDLGDIKVTGNVGVRVVHTD EECCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEECCCEEECCCEEEECCCCEEEEECC QSSKGLQQVGYGLGEAITDELGVISNDYIRNEIGKTYTDYLPSINLSFHLTENDQLRFAA CCCCHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCHHHHHCCCCCEEEEECCCCCEEHHH ASVMSRPPIDKLKSGMGSWYDDSATPGYKKYNAWGNTSPLLDPFYADQYDLSYEHYFEDS HHHHCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHEECC QGAVVVALFYKDIKSFINNFTIQPYDFEGNGFIVPDTIVDNGVEFPVVKDEGQYQTAINN CCCEEEEHHHHHHHHHHHCCCCCEEEECCCCEECCCHHHCCCCCCEEECCCCCEEEEEEC DNGGYIRGVELGYTQVFDFLPSPLSGLGFTGSYSYSDSEVEFTTDLSGSNLTIPLPGLSE CCCCEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCH SVLNTTLFYSLDGFDTRVSMRYRSSYVSEQVAVESQLAFFDAETIVDYQASYALENGLKF HHHCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHCCEE LFQINNLTDEPNKTYFGEEHQTGTIQYFGRQYFLGLSYSL EEEECCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA