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The map label for this gene is ddl [H]

Identifier: 126174499

GI number: 126174499

Start: 2649984

End: 2650997

Strand: Direct

Name: ddl [H]

Synonym: Sbal_2283

Alternate gene names: 126174499

Gene position: 2649984-2650997 (Clockwise)

Preceding gene: 126174498

Following gene: 126174504

Centisome position: 51.68

GC content: 46.65

Gene sequence:

>1014_bases
ATGTCTAAGATCAATCTACTTTTGCTGTGCGGCGGCGGAAGTGCCGAACACGATATTTCATTAATGTCGGCCAACTATTT
TGAAACCTCACTGGCAAAATCTGAGCAGTTTTCCGTGTTGCGAGTCGAGCTGGATAAATTCGGCCAGTACCGCACTGCCG
CTGGTGACGACAGTGAGCTGACCAATAGCCGCGAGATTCGCTTCCGTGATGAAAGCAAAACGCCATGGCCAGTCGATTAC
GTCATTCCTTGCATTCATGGCTATCCCGGCGAGACTGGCGACATTCAATCCTATTTTAATCTGATCCAACTGCCCTATTT
TGGCTGTGAATCCGAAGCGAGCAGCAACTGCTTCAATAAGATCACCGCTAAAATGTGGTTCTCGGCCTTAGGTATTCCTA
ATACGCCATATATTTTCCTGAATCAGTTCGATGATGCGGCGATTGAGCAAACCCAAGCGGCATTGGCACAATGGGGATCG
ATCTTCGTTAAAGCGGCCTCGCAGGGTTCCTCTGTTGGTTGTTACAAAGTGGATGACAGCGATAAAGTTGCAGGCGTGCT
TAAGGATGCTTTTGGCTATGCACCCTATGTGATCGTTGAAAAAACCATAAAAGCCCGCGAGTTAGAAGTAGCAGTATACG
AGTACAATGGTGAAGTGGTGGCGACAGTGCCAGGTGAAATCATCTGTGATACCAACACCTTCTACACCTTCGATGAGAAA
TACGCCAAAAACAGTAAAGCGCGCACCGATGTGGTCGCACAGCATGTTTCAGCTGAGATCAGCGAACAGATCCGTGCCTA
TGCAATCAAGGCATTTAAAGGAATGAAGCTGCGTCATCTGTCGCGCATCGACTTTTTCTTAACCGCGGACAATGAAATTC
TATTGAATGAAATCAATACCTTCCCAGGTTCTACGCCGATTTCTATGTTCCCTAAAATGCTGCAAAATCACGGTCATGAC
TTTACTGAATACTTGAGCCTAGTGATTAACGGTCAGCTAACCGCTAAATCTTAA

Upstream 100 bases:

>100_bases
AGGGACAAGAAAACTAAGATGACAGCGGTTGTACTATAGGATGATGTTCGTATTGCCACAGGCCGATATCATCCGATTTT
GCTCACTTTGAGGAATCACA

Downstream 100 bases:

>100_bases
AATTCATCAATCTGACTCAGTGTGCACGCCTATACTCAGTGCAACACCCGTTTTCAGTAATAAAAAGAGCGCCTTGGCGC
TCTTTTTGTTTTTATATTTC

Product: D-alanyl-alanine synthetase A

Products: NA

Alternate protein names: D-Ala-D-Ala ligase; D-alanylalanine synthetase [H]

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSKINLLLLCGGGSAEHDISLMSANYFETSLAKSEQFSVLRVELDKFGQYRTAAGDDSELTNSREIRFRDESKTPWPVDY
VIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNKITAKMWFSALGIPNTPYIFLNQFDDAAIEQTQAALAQWGS
IFVKAASQGSSVGCYKVDDSDKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYNGEVVATVPGEIICDTNTFYTFDEK
YAKNSKARTDVVAQHVSAEISEQIRAYAIKAFKGMKLRHLSRIDFFLTADNEILLNEINTFPGSTPISMFPKMLQNHGHD
FTEYLSLVINGQLTAKS

Sequences:

>Translated_337_residues
MSKINLLLLCGGGSAEHDISLMSANYFETSLAKSEQFSVLRVELDKFGQYRTAAGDDSELTNSREIRFRDESKTPWPVDY
VIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNKITAKMWFSALGIPNTPYIFLNQFDDAAIEQTQAALAQWGS
IFVKAASQGSSVGCYKVDDSDKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYNGEVVATVPGEIICDTNTFYTFDEK
YAKNSKARTDVVAQHVSAEISEQIRAYAIKAFKGMKLRHLSRIDFFLTADNEILLNEINTFPGSTPISMFPKMLQNHGHD
FTEYLSLVINGQLTAKS
>Mature_336_residues
SKINLLLLCGGGSAEHDISLMSANYFETSLAKSEQFSVLRVELDKFGQYRTAAGDDSELTNSREIRFRDESKTPWPVDYV
IPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNKITAKMWFSALGIPNTPYIFLNQFDDAAIEQTQAALAQWGSI
FVKAASQGSSVGCYKVDDSDKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYNGEVVATVPGEIICDTNTFYTFDEKY
AKNSKARTDVVAQHVSAEISEQIRAYAIKAFKGMKLRHLSRIDFFLTADNEILLNEINTFPGSTPISMFPKMLQNHGHDF
TEYLSLVINGQLTAKS

Specific function: Cell wall formation [H]

COG id: COG1181

COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Escherichia coli, GI1786579, Length=351, Percent_Identity=33.9031339031339, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786280, Length=328, Percent_Identity=26.219512195122, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR000291
- InterPro:   IPR005905
- InterPro:   IPR011095
- InterPro:   IPR011127
- InterPro:   IPR013817
- InterPro:   IPR016185 [H]

Pfam domain/function: PF07478 Dala_Dala_lig_C; PF01820 Dala_Dala_lig_N [H]

EC number: =6.3.2.4 [H]

Molecular weight: Translated: 37516; Mature: 37384

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS50975 ATP_GRASP ; PS00843 DALA_DALA_LIGASE_1 ; PS00844 DALA_DALA_LIGASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKINLLLLCGGGSAEHDISLMSANYFETSLAKSEQFSVLRVELDKFGQYRTAAGDDSEL
CCCEEEEEEECCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEEHHHCCCEECCCCCCHHC
TNSREIRFRDESKTPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
CCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
ITAKMWFSALGIPNTPYIFLNQFDDAAIEQTQAALAQWGSIFVKAASQGSSVGCYKVDDS
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCC
DKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYNGEVVATVPGEIICDTNTFYTFDEK
HHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCEEEEECCCEEEECCCCEEEECHH
YAKNSKARTDVVAQHVSAEISEQIRAYAIKAFKGMKLRHLSRIDFFLTADNEILLNEINT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCCEEEEEEHHC
FPGSTPISMFPKMLQNHGHDFTEYLSLVINGQLTAKS
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCEEEECC
>Mature Secondary Structure 
SKINLLLLCGGGSAEHDISLMSANYFETSLAKSEQFSVLRVELDKFGQYRTAAGDDSEL
CCEEEEEEECCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEEHHHCCCEECCCCCCHHC
TNSREIRFRDESKTPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
CCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
ITAKMWFSALGIPNTPYIFLNQFDDAAIEQTQAALAQWGSIFVKAASQGSSVGCYKVDDS
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECCC
DKVAGVLKDAFGYAPYVIVEKTIKARELEVAVYEYNGEVVATVPGEIICDTNTFYTFDEK
HHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCEEEEECCCEEEECCCCEEEECHH
YAKNSKARTDVVAQHVSAEISEQIRAYAIKAFKGMKLRHLSRIDFFLTADNEILLNEINT
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCCEEEEEEHHC
FPGSTPISMFPKMLQNHGHDFTEYLSLVINGQLTAKS
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA