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The map label for this gene is rmuC [H]

Identifier: 126174488

GI number: 126174488

Start: 2628941

End: 2630500

Strand: Direct

Name: rmuC [H]

Synonym: Sbal_2272

Alternate gene names: 126174488

Gene position: 2628941-2630500 (Clockwise)

Preceding gene: 126174485

Following gene: 126174489

Centisome position: 51.27

GC content: 47.31

Gene sequence:

>1560_bases
ATGCCATTTTCTCAATCTTTTTCCGTCGCCGAAATCATCGGCCTTCTCGCCATTGCCTTCTTAGGCCTGTTGATCGGTGC
CCTGCTCAACCAAAGACTCACCCGCCAACGTTGGCAACAACACAAAGACCAACTCGAGCAAGAGATGCGTCAAGTGAATG
AAGATGCTGAATTATCCTTAGCACAACAGCAGATTTTGGTTGATGACAAAGAGGCGCAACTGCGCCAATACCAGCAGCGC
CTTGAGCTCAAAATTGAACAATTAGGTAAAGCCGAGGCTTTAGCCGAACGTGTACCCACCTTAGAGCAACAATTGAATGA
CAGCCAGCGCCGTCAATTAGAAATTCAATTGGCGCTGTCGAAATCCAATGCCATGCAGCAAACCATTCAAGCCAAGGCCG
ATGTCCAGCAAGAATCACTGCAGGATAAAATCGCCAGCCTAGAATCGGCCGAAGTGCGCTTACAAACCCAATTTGAAAAC
CTCGCCAATCGAATCTTTGAAGAACGTAGCGAAAACTTTAAGCATCAAAATGCCAGCCAACTCGAAGGCGTGCTTGGGCC
ATTGAAACAACAGCTTGAAGGATTCAGACAGCAAATTCGTGAATCCTACACCCACGAACAGTCCGAGCGCAGCGCCCTTA
AACATCAACTTGAGCACCTCAGAGATCTCAATCTGAAGATGAGCCAAGATGCAATCAACCTGACCAAAGCGCTCAAGGGT
GATAACAAGCAGCAAGGTAACTGGGGTGAAGTGATCCTCGATCGCGTGCTGCAGGAAAGCGGTCTACGTGAAGGCCATGA
ATACCATACCCAGCAAGATCTCAAGGACGACAACGGTAAGCGCTTTAAGCCGGATGTGATTGTGCATCTGCCAGAAAATA
AAGACGTGGTCATCGATGCTAAGATGTCCTTGGTCAGTTATGAGCGTTACTTTAACAGTGAAGATCCTGCCCTGCGCCAA
CAGGCGATTAATGAGCATGTGATCTCGATTCGTAGCCACATTAAGGGCTTGAGTCAAAAGGATTATCAAAATCTGCACGG
GCTTAAGAGCCTCGATTATGTGTTGATGTTTATTCCTATTGAACCGGCATTTTTACTGGCGTTAGAGCATGATCCTAGCC
TAGTCAATTTTGCCCTTGAGCAGAATATTATGTTGGTGAGCCCAACGAATTTACTGGTGGCCCTGCGCACCATTAACAAT
ATTTGGCGCTACGAATATCAAAACCAACATGCGCAAACCATAGCAAAACAAGCGGGTCGAATTTACGACAAGTTATGTGG
TTATATTGAAGACATGGAAAAACTCGGTCGTGCCTTAGATAACGCCGAAAAAACCTATCACAGCGCCATGAACAAGCTGT
CATCGGGCAAAGGCAACCTAGTGCGTCAAGCCCATTTAATGCAGCAACTCGGGGTCGATACCAGTAAACAGCTAGATAAA
ATGCTGCTAGAAAAAGCACTCAATGAAGCCCAAGACGACAACGACACACAGGATGATGACGCTGAGCTAACGCTGCCGCC
AACGCGCGATCCTAAGGACACAGAACTCGAACCCGCATAA

Upstream 100 bases:

>100_bases
TCATTCAGGCATTAAGCGCAGATATAGTTGATTAAAGGGCTTGAAGCCTATTGGGCGGCATGCGAACCTAAGCGCCAAAG
CTAAAGGAGTGCTATTGATC

Downstream 100 bases:

>100_bases
TGCCCAAAATGATAAATTGAGTTAATAAACTGATTCGATAAACAAAGTTGATAGACCTAATTGATTGATAGAGTTGAACA
CTCGCCAATAACCTTGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MPFSQSFSVAEIIGLLAIAFLGLLIGALLNQRLTRQRWQQHKDQLEQEMRQVNEDAELSLAQQQILVDDKEAQLRQYQQR
LELKIEQLGKAEALAERVPTLEQQLNDSQRRQLEIQLALSKSNAMQQTIQAKADVQQESLQDKIASLESAEVRLQTQFEN
LANRIFEERSENFKHQNASQLEGVLGPLKQQLEGFRQQIRESYTHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKG
DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDNGKRFKPDVIVHLPENKDVVIDAKMSLVSYERYFNSEDPALRQ
QAINEHVISIRSHIKGLSQKDYQNLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINN
IWRYEYQNQHAQTIAKQAGRIYDKLCGYIEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
MLLEKALNEAQDDNDTQDDDAELTLPPTRDPKDTELEPA

Sequences:

>Translated_519_residues
MPFSQSFSVAEIIGLLAIAFLGLLIGALLNQRLTRQRWQQHKDQLEQEMRQVNEDAELSLAQQQILVDDKEAQLRQYQQR
LELKIEQLGKAEALAERVPTLEQQLNDSQRRQLEIQLALSKSNAMQQTIQAKADVQQESLQDKIASLESAEVRLQTQFEN
LANRIFEERSENFKHQNASQLEGVLGPLKQQLEGFRQQIRESYTHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKG
DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDNGKRFKPDVIVHLPENKDVVIDAKMSLVSYERYFNSEDPALRQ
QAINEHVISIRSHIKGLSQKDYQNLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINN
IWRYEYQNQHAQTIAKQAGRIYDKLCGYIEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
MLLEKALNEAQDDNDTQDDDAELTLPPTRDPKDTELEPA
>Mature_518_residues
PFSQSFSVAEIIGLLAIAFLGLLIGALLNQRLTRQRWQQHKDQLEQEMRQVNEDAELSLAQQQILVDDKEAQLRQYQQRL
ELKIEQLGKAEALAERVPTLEQQLNDSQRRQLEIQLALSKSNAMQQTIQAKADVQQESLQDKIASLESAEVRLQTQFENL
ANRIFEERSENFKHQNASQLEGVLGPLKQQLEGFRQQIRESYTHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKGD
NKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDNGKRFKPDVIVHLPENKDVVIDAKMSLVSYERYFNSEDPALRQQ
AINEHVISIRSHIKGLSQKDYQNLHGLKSLDYVLMFIPIEPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNI
WRYEYQNQHAQTIAKQAGRIYDKLCGYIEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDKM
LLEKALNEAQDDNDTQDDDAELTLPPTRDPKDTELEPA

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=416, Percent_Identity=49.2788461538462, Blast_Score=419, Evalue=1e-118,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 59574; Mature: 59443

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSQSFSVAEIIGLLAIAFLGLLIGALLNQRLTRQRWQQHKDQLEQEMRQVNEDAELSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AQQQILVDDKEAQLRQYQQRLELKIEQLGKAEALAERVPTLEQQLNDSQRRQLEIQLALS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHCHHHHHEEEEEEEEH
KSNAMQQTIQAKADVQQESLQDKIASLESAEVRLQTQFENLANRIFEERSENFKHQNASQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LEGVLGPLKQQLEGFRQQIRESYTHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDNGKRFKPDVIVHLPENKDVVIDA
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEECCCEEEECCCCCCEEEEH
KMSLVSYERYFNSEDPALRQQAINEHVISIRSHIKGLSQKDYQNLHGLKSLDYVLMFIPI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHCCEEEEEEC
EPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGR
CCEEEEEECCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IYDKLCGYIEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
MLLEKALNEAQDDNDTQDDDAELTLPPTRDPKDTELEPA
HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
PFSQSFSVAEIIGLLAIAFLGLLIGALLNQRLTRQRWQQHKDQLEQEMRQVNEDAELSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
AQQQILVDDKEAQLRQYQQRLELKIEQLGKAEALAERVPTLEQQLNDSQRRQLEIQLALS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHCHHHHHEEEEEEEEH
KSNAMQQTIQAKADVQQESLQDKIASLESAEVRLQTQFENLANRIFEERSENFKHQNASQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LEGVLGPLKQQLEGFRQQIRESYTHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDNGKRFKPDVIVHLPENKDVVIDA
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEECCCEEEECCCCCCEEEEH
KMSLVSYERYFNSEDPALRQQAINEHVISIRSHIKGLSQKDYQNLHGLKSLDYVLMFIPI
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHCCEEEEEEC
EPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGR
CCEEEEEECCCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IYDKLCGYIEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
MLLEKALNEAQDDNDTQDDDAELTLPPTRDPKDTELEPA
HHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]