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The map label for this gene is yccA [C]

Identifier: 126174383

GI number: 126174383

Start: 2508634

End: 2509293

Strand: Reverse

Name: yccA [C]

Synonym: Sbal_2166

Alternate gene names: 126174383

Gene position: 2509293-2508634 (Counterclockwise)

Preceding gene: 126174384

Following gene: 126174382

Centisome position: 48.94

GC content: 44.85

Gene sequence:

>660_bases
ATGACCCAAGAAACCTTATATTCGACAAGTGCGTCAACACTGGAAGTGAACAAACTTCTTAAAAACACTTATATGCTGTT
GTCTATGACATTGGCCTTCTCTGCCCTGTGCGCTGGCTTGGCAATGGCATTAAATATCAGTCCATTACTCTCCATTGGCT
TATCCATTGGTGGCCTAGTGCTGTTGTTTGTAACCTTACGTAAAGCCGAGTCTGCAGCGGGTATCTTCTGGGTATTTGCC
TTTACTGGTATGGAAGGCGCGTCACTGGGCTACATGCTGAATCACTACGTAGGCATGGCAAACGGTCCACAGCTGATCAT
GCAAGCACTGGGGTTAACGTCAGTGATTTTCGTTGCCTTATCAGCCTATGCGGTGACCACTAAGAAAGATTTCTCTTTTC
TACGTGGATTCTTGTTTGCTGGCTTGATTGTGGTGATTGCCGCTGCCGTAATTAACATCTTTATGGGTAACAGCATTGCC
TTTATGGCGATTAACGCCGGTATTGCATTATTGATGACAGGTTTTATCCTGTTTGATACTAGCCGTATTGTGAACGGTGG
CGAGACGAACTACATTCGCGCAACTATCTCATTATACTTAGATTTCTTAAACCTCTTCATCGCGCTGTTGCACCTTATGG
GCATAGGCAACGATGACTAA

Upstream 100 bases:

>100_bases
ATCATGAATGCAGTTAAGTTCGTTTTAGGATTTTACGGGAACTTAGTGTGCTGTAAAAAATCAAAATGATCAGTTTGGAA
ATGTGTCAACGGAGATCAAC

Downstream 100 bases:

>100_bases
TCCTAGTTAGCGATTTTTAGCTTAACTTGCGTTAGAATGGCCCTACTTTTAGGGCCATTTTTATTTTAAATGAGCAAATT
TATTATCCAAGTGAACGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTQETLYSTSASTLEVNKLLKNTYMLLSMTLAFSALCAGLAMALNISPLLSIGLSIGGLVLLFVTLRKAESAAGIFWVFA
FTGMEGASLGYMLNHYVGMANGPQLIMQALGLTSVIFVALSAYAVTTKKDFSFLRGFLFAGLIVVIAAAVINIFMGNSIA
FMAINAGIALLMTGFILFDTSRIVNGGETNYIRATISLYLDFLNLFIALLHLMGIGNDD

Sequences:

>Translated_219_residues
MTQETLYSTSASTLEVNKLLKNTYMLLSMTLAFSALCAGLAMALNISPLLSIGLSIGGLVLLFVTLRKAESAAGIFWVFA
FTGMEGASLGYMLNHYVGMANGPQLIMQALGLTSVIFVALSAYAVTTKKDFSFLRGFLFAGLIVVIAAAVINIFMGNSIA
FMAINAGIALLMTGFILFDTSRIVNGGETNYIRATISLYLDFLNLFIALLHLMGIGNDD
>Mature_218_residues
TQETLYSTSASTLEVNKLLKNTYMLLSMTLAFSALCAGLAMALNISPLLSIGLSIGGLVLLFVTLRKAESAAGIFWVFAF
TGMEGASLGYMLNHYVGMANGPQLIMQALGLTSVIFVALSAYAVTTKKDFSFLRGFLFAGLIVVIAAAVINIFMGNSIAF
MAINAGIALLMTGFILFDTSRIVNGGETNYIRATISLYLDFLNLFIALLHLMGIGNDD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=222, Percent_Identity=27.4774774774775, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1787205, Length=209, Percent_Identity=46.4114832535885, Blast_Score=156, Evalue=9e-40,
Organism=Drosophila melanogaster, GI45551091, Length=123, Percent_Identity=30.8943089430894, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI17647735, Length=123, Percent_Identity=30.8943089430894, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24653225, Length=123, Percent_Identity=30.8943089430894, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24653221, Length=123, Percent_Identity=30.8943089430894, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24653223, Length=123, Percent_Identity=30.8943089430894, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24653227, Length=123, Percent_Identity=30.8943089430894, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 23400; Mature: 23269

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQETLYSTSASTLEVNKLLKNTYMLLSMTLAFSALCAGLAMALNISPLLSIGLSIGGLV
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFVTLRKAESAAGIFWVFAFTGMEGASLGYMLNHYVGMANGPQLIMQALGLTSVIFVAL
HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SAYAVTTKKDFSFLRGFLFAGLIVVIAAAVINIFMGNSIAFMAINAGIALLMTGFILFDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
SRIVNGGETNYIRATISLYLDFLNLFIALLHLMGIGNDD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TQETLYSTSASTLEVNKLLKNTYMLLSMTLAFSALCAGLAMALNISPLLSIGLSIGGLV
CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLFVTLRKAESAAGIFWVFAFTGMEGASLGYMLNHYVGMANGPQLIMQALGLTSVIFVAL
HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SAYAVTTKKDFSFLRGFLFAGLIVVIAAAVINIFMGNSIAFMAINAGIALLMTGFILFDT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHH
SRIVNGGETNYIRATISLYLDFLNLFIALLHLMGIGNDD
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]