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The map label for this gene is ychE [H]

Identifier: 126174149

GI number: 126174149

Start: 2237124

End: 2237756

Strand: Direct

Name: ychE [H]

Synonym: Sbal_1923

Alternate gene names: 126174149

Gene position: 2237124-2237756 (Clockwise)

Preceding gene: 126174147

Following gene: 126174150

Centisome position: 43.63

GC content: 46.76

Gene sequence:

>633_bases
TTGGAGTTAACTCTTTACGTTAAATTTTTTCTTGGCCTAGTTGCCATCATCAACCCAGTCGGGTTGTTGCCTGTGTTTGT
GAGCTTAACCAGCCATCAAACTGAAGCTGAGCGAAATCACACGGGTAAAGTGGCTAACTTTGCGGTTGTGGTGATCCTCT
TAGTCACGATTGTGGCGGGTCAGCACATTCTGAATATGTTCAGCATTTCGTTATCAGCCTTTAGGATCGCGGGTGGTAGT
CTGATCGCCATTATTGCGATGTCGATGTTGCAAGGTAAGTTAGGCGAAGTGAAGCGTAACCAAGAGGAAGACCGCGAATC
TTCTGCGATGGAGTCGGTGGCGGTTGTGCCTTTGGCTTTGCCACTGATGGCCGGACCAGGTGCGATCAGTTCGGTGATTG
TCTTTGCCGCCGAGCATAATTCATTGTCGAACATCATTGCGATGTTTATTACTGTGATTGTGTTTGGTTTAGTGAGTTTT
GGCCTGTTTAGAATGGCATCCGTCATCTATAAGATTTTGGGTAAGACGGGGATTAACGTCATTACCCGTCTTATGGGGCT
GTTGATGCTATCCATAGGTATTGAAGTGATTGCGGCAGGTGTAAAGGGATTATTCCCGCAGCTCTTTAGCTAG

Upstream 100 bases:

>100_bases
TCAAAAATCTCATTTTTCAGTCAATAGCGCTTGAGATACTATACTTGCCCTCAAGCATATTTTGATGAAGACGGCGTGAC
ACGCACATAAGGATAGCAAC

Downstream 100 bases:

>100_bases
AGTCGTATTACCCCGCAGAATTGAGTTTTTCCTTCTTTTTACGAAACGCATTGGAGTTTATCCCGTGCGTTTTTTTTATC
AGTGACTCGTTTGATGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MELTLYVKFFLGLVAIINPVGLLPVFVSLTSHQTEAERNHTGKVANFAVVVILLVTIVAGQHILNMFSISLSAFRIAGGS
LIAIIAMSMLQGKLGEVKRNQEEDRESSAMESVAVVPLALPLMAGPGAISSVIVFAAEHNSLSNIIAMFITVIVFGLVSF
GLFRMASVIYKILGKTGINVITRLMGLLMLSIGIEVIAAGVKGLFPQLFS

Sequences:

>Translated_210_residues
MELTLYVKFFLGLVAIINPVGLLPVFVSLTSHQTEAERNHTGKVANFAVVVILLVTIVAGQHILNMFSISLSAFRIAGGS
LIAIIAMSMLQGKLGEVKRNQEEDRESSAMESVAVVPLALPLMAGPGAISSVIVFAAEHNSLSNIIAMFITVIVFGLVSF
GLFRMASVIYKILGKTGINVITRLMGLLMLSIGIEVIAAGVKGLFPQLFS
>Mature_210_residues
MELTLYVKFFLGLVAIINPVGLLPVFVSLTSHQTEAERNHTGKVANFAVVVILLVTIVAGQHILNMFSISLSAFRIAGGS
LIAIIAMSMLQGKLGEVKRNQEEDRESSAMESVAVVPLALPLMAGPGAISSVIVFAAEHNSLSNIIAMFITVIVFGLVSF
GLFRMASVIYKILGKTGINVITRLMGLLMLSIGIEVIAAGVKGLFPQLFS

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=209, Percent_Identity=52.6315789473684, Blast_Score=238, Evalue=2e-64,
Organism=Escherichia coli, GI1787809, Length=194, Percent_Identity=31.9587628865979, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789842, Length=192, Percent_Identity=26.5625, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22357; Mature: 22357

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTLYVKFFLGLVAIINPVGLLPVFVSLTSHQTEAERNHTGKVANFAVVVILLVTIVAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QHILNMFSISLSAFRIAGGSLIAIIAMSMLQGKLGEVKRNQEEDRESSAMESVAVVPLAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PLMAGPGAISSVIVFAAEHNSLSNIIAMFITVIVFGLVSFGLFRMASVIYKILGKTGINV
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ITRLMGLLMLSIGIEVIAAGVKGLFPQLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELTLYVKFFLGLVAIINPVGLLPVFVSLTSHQTEAERNHTGKVANFAVVVILLVTIVAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
QHILNMFSISLSAFRIAGGSLIAIIAMSMLQGKLGEVKRNQEEDRESSAMESVAVVPLAL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
PLMAGPGAISSVIVFAAEHNSLSNIIAMFITVIVFGLVSFGLFRMASVIYKILGKTGINV
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ITRLMGLLMLSIGIEVIAAGVKGLFPQLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]