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The map label for this gene is nudL [H]

Identifier: 126174142

GI number: 126174142

Start: 2225869

End: 2226456

Strand: Reverse

Name: nudL [H]

Synonym: Sbal_1916

Alternate gene names: 126174142

Gene position: 2226456-2225869 (Counterclockwise)

Preceding gene: 126174143

Following gene: 126174140

Centisome position: 43.42

GC content: 50.34

Gene sequence:

>588_bases
ATGGATCAAGCGGAATTTAGACTCAGATTTAATCTGCACCCTTTAGCGCTGCAAGATCCGGCGGCCTTCCCACACCTTGG
ACTGCGCAAAGCTGCGGTGTTGATCCCACTGCAGGATATCAACGGTGAACTGAATCTGATTTTAACCCAAAGACCCATGC
ACCTTCGCGCCCATCCGGGGCAGATCAGTTTCCCCGGCGGTAAAATTGAGCCCTACGATGTCGATGCAATTGCGGCTGCG
TTAAGGGAAGCTGAAGAAGAAATTGGATTATCGCGGTATAACGTCGATGTGGTGGGCACATTTCCGGCCCACAATACTTT
TACCGGATTTGAAATCACGCCCGTGGTCGGCATTATCAAGCAGGCATTTGATTGGAAACTCGATCCCGGTGAGGTAGCCG
ATTGCTTTACTGTGCCATTAAGCTTTTTTATTGAGCCGAGCAATCGCCACCAAAAACGCTTTTTACGCCAAGGGCGCTAC
TACAGCGTGCATTTTATTCCCTATCAACAACGCTTTATCTGGGGCGCGACCGCCGCCATTATCGACCATTTATGCCGCCA
GTTAAGCATTCCTGCGGATATCCTCTGA

Upstream 100 bases:

>100_bases
TACCAAGAAACCTTTGATAAGATCAGCCGGATTTTGCCTTTACTTGGCGCAGAGCCGCAAAAGCCGTAAGCTTTCATACT
AAACAGTAACGAGAACGTCG

Downstream 100 bases:

>100_bases
CTTCATTTGCCATCGCTAAACCGTTAAAAAGCCAACTGGCTAATTTAAACCACCAAGTGAATATACAAACCGGCGACAAT
CGAGGTTAACAGCAACATGG

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MDQAEFRLRFNLHPLALQDPAAFPHLGLRKAAVLIPLQDINGELNLILTQRPMHLRAHPGQISFPGGKIEPYDVDAIAAA
LREAEEEIGLSRYNVDVVGTFPAHNTFTGFEITPVVGIIKQAFDWKLDPGEVADCFTVPLSFFIEPSNRHQKRFLRQGRY
YSVHFIPYQQRFIWGATAAIIDHLCRQLSIPADIL

Sequences:

>Translated_195_residues
MDQAEFRLRFNLHPLALQDPAAFPHLGLRKAAVLIPLQDINGELNLILTQRPMHLRAHPGQISFPGGKIEPYDVDAIAAA
LREAEEEIGLSRYNVDVVGTFPAHNTFTGFEITPVVGIIKQAFDWKLDPGEVADCFTVPLSFFIEPSNRHQKRFLRQGRY
YSVHFIPYQQRFIWGATAAIIDHLCRQLSIPADIL
>Mature_195_residues
MDQAEFRLRFNLHPLALQDPAAFPHLGLRKAAVLIPLQDINGELNLILTQRPMHLRAHPGQISFPGGKIEPYDVDAIAAA
LREAEEEIGLSRYNVDVVGTFPAHNTFTGFEITPVVGIIKQAFDWKLDPGEVADCFTVPLSFFIEPSNRHQKRFLRQGRY
YSVHFIPYQQRFIWGATAAIIDHLCRQLSIPADIL

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=168, Percent_Identity=38.6904761904762, Blast_Score=109, Evalue=1e-24,
Organism=Escherichia coli, GI1788115, Length=165, Percent_Identity=41.8181818181818, Blast_Score=102, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17510677, Length=159, Percent_Identity=35.8490566037736, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17536993, Length=120, Percent_Identity=34.1666666666667, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI18859683, Length=169, Percent_Identity=35.5029585798817, Blast_Score=87, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22056; Mature: 22056

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQAEFRLRFNLHPLALQDPAAFPHLGLRKAAVLIPLQDINGELNLILTQRPMHLRAHPG
CCCCEEEEEEECCCEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEECCC
QISFPGGKIEPYDVDAIAAALREAEEEIGLSRYNVDVVGTFPAHNTFTGFEITPVVGIIK
EEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECEEEEEECCCCCCCCCEEHHHHHHHHH
QAFDWKLDPGEVADCFTVPLSFFIEPSNRHQKRFLRQGRYYSVHFIPYQQRFIWGATAAI
HHHCCCCCCCCHHHHHEECEEEEECCCCHHHHHHHHCCCEEEEEEEECHHHEEHHHHHHH
IDHLCRQLSIPADIL
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MDQAEFRLRFNLHPLALQDPAAFPHLGLRKAAVLIPLQDINGELNLILTQRPMHLRAHPG
CCCCEEEEEEECCCEEECCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEECCC
QISFPGGKIEPYDVDAIAAALREAEEEIGLSRYNVDVVGTFPAHNTFTGFEITPVVGIIK
EEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEECEEEEEECCCCCCCCCEEHHHHHHHHH
QAFDWKLDPGEVADCFTVPLSFFIEPSNRHQKRFLRQGRYYSVHFIPYQQRFIWGATAAI
HHHCCCCCCCCHHHHHEECEEEEECCCCHHHHHHHHCCCEEEEEEEECHHHEEHHHHHHH
IDHLCRQLSIPADIL
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA