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The map label for this gene is napC [H]

Identifier: 126174138

GI number: 126174138

Start: 2222338

End: 2222925

Strand: Direct

Name: napC [H]

Synonym: Sbal_1912

Alternate gene names: 126174138

Gene position: 2222338-2222925 (Clockwise)

Preceding gene: 126174137

Following gene: 126174139

Centisome position: 43.34

GC content: 48.98

Gene sequence:

>588_bases
ATGTTAGATAAACTGAAAAAAATCTGGCAGGTACTCAATCGTCCGAGTGTGCATTACAGTTTAGGTTTTTTGACCTTAGG
TGGCTTTGTGGCTGGAGTGATTTTCTGGGGCGGCTTTAACACGGCCCTTGAAGCGACCAACAAGGAAGCCTTCTGTATCA
GTTGCCATGAAATGGAAAACAACGTCTATCAAGAGTTACAGACGACAATTCACTTTACTAACCGCAGCGGTGTGCGGGCA
ACGTGCCCTGACTGCCATGTGCCGCATAATTGGACCGATAAAATCGCCCGTAAAATGCAGGCCTCTAAGGAAGTGTGGGG
CAAGGTTTTCGGTACGATTAACACCCGAGACAAGTTTGAAAGTAAACGGCGTGAACTGGCTGAGCATGAGTGGGCGCGTT
TAAAGGCCTATGACTCGCTCGAGTGTCGTAACTGCCATAACTTTACGTATATGGACTTTACCCGCCAATCACCTAGAGCG
GCTCAGATGCACTCAACGTCACTGGCGAGCGGCGAAAAGACCTGTATCGATTGCCACAAGGGGATTGCTCACCATCTCCC
CGATATGGCAGGTGTGAAGGGCTTTTAA

Upstream 100 bases:

>100_bases
TGCCGCAGTTAGATGCCAAGTTACTGGTCGAAAACGACTTTGTGGATATGGAACATCTGATCAAAGCCAACACTGAGCAG
AAAAAACACTAGGAGTTAGC

Downstream 100 bases:

>100_bases
TCTTAAACAGAGTGTGACTTCGTGTGGCTTAGCGTGACTTAGTCTCGTGTTAGTTTTACTTGATGTTGCTTTTGCTTAGT
GTTGCTTAAGGTTAGTTAGA

Product: NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLDKLKKIWQVLNRPSVHYSLGFLTLGGFVAGVIFWGGFNTALEATNKEAFCISCHEMENNVYQELQTTIHFTNRSGVRA
TCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTRDKFESKRRELAEHEWARLKAYDSLECRNCHNFTYMDFTRQSPRA
AQMHSTSLASGEKTCIDCHKGIAHHLPDMAGVKGF

Sequences:

>Translated_195_residues
MLDKLKKIWQVLNRPSVHYSLGFLTLGGFVAGVIFWGGFNTALEATNKEAFCISCHEMENNVYQELQTTIHFTNRSGVRA
TCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTRDKFESKRRELAEHEWARLKAYDSLECRNCHNFTYMDFTRQSPRA
AQMHSTSLASGEKTCIDCHKGIAHHLPDMAGVKGF
>Mature_195_residues
MLDKLKKIWQVLNRPSVHYSLGFLTLGGFVAGVIFWGGFNTALEATNKEAFCISCHEMENNVYQELQTTIHFTNRSGVRA
TCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTRDKFESKRRELAEHEWARLKAYDSLECRNCHNFTYMDFTRQSPRA
AQMHSTSLASGEKTCIDCHKGIAHHLPDMAGVKGF

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=192, Percent_Identity=57.8125, Blast_Score=238, Evalue=2e-64,
Organism=Escherichia coli, GI1787230, Length=187, Percent_Identity=43.3155080213904, Blast_Score=172, Evalue=1e-44,
Organism=Escherichia coli, GI1788181, Length=148, Percent_Identity=47.2972972972973, Blast_Score=147, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 22269; Mature: 22269

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKLKKIWQVLNRPSVHYSLGFLTLGGFVAGVIFWGGFNTALEATNKEAFCISCHEMEN
CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEHHHHHH
NVYQELQTTIHFTNRSGVRATCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTRDKFE
HHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SKRRELAEHEWARLKAYDSLECRNCHNFTYMDFTRQSPRAAQMHSTSLASGEKTCIDCHK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHH
GIAHHLPDMAGVKGF
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MLDKLKKIWQVLNRPSVHYSLGFLTLGGFVAGVIFWGGFNTALEATNKEAFCISCHEMEN
CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEHHHHHH
NVYQELQTTIHFTNRSGVRATCPDCHVPHNWTDKIARKMQASKEVWGKVFGTINTRDKFE
HHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
SKRRELAEHEWARLKAYDSLECRNCHNFTYMDFTRQSPRAAQMHSTSLASGEKTCIDCHK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHH
GIAHHLPDMAGVKGF
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7639719 [H]