| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174034
Identifier: 126174034
GI number: 126174034
Start: 2101305
End: 2101898
Strand: Direct
Name: 126174034
Synonym: Sbal_1807
Alternate gene names: NA
Gene position: 2101305-2101898 (Clockwise)
Preceding gene: 126174033
Following gene: 126174035
Centisome position: 40.98
GC content: 49.83
Gene sequence:
>594_bases ATGCCACTTGCATCCCTTTACCAAAAATTGCTCAATATGAGTCGCTATTTCGATGGCGTAGCGCCATTAGCCCTCAGGAT TTACCTTGCGCCCGTGTTGATGCAAGCGGGTTATAACAAGCTCGCCCACTTTGACGATACGGTTGCTTGGTTTGCCAATC CCGATTGGGGTTTAGGCCTGCCAATGCCGGCGGTAATGGCAGGATTGGCGGCGGGCACCGAGTTCTTCGGCGCTATCTTA TTGCTGCTTGGGCTCGCGACGAGGCTGATATCTATCCCTTTGATGGTCACCATGTTGGTCGCTGCATTTACCGTGCATTG GCCAAATGGCTGGTTAGCGATTGCCGATGGCAGTTCTTGGTTAGCTAACGACAGAGTGCTTGAGGCTGGGGATAAACTGG CGAAAGCCAAAGAAATATTGCAGGAGCACGGTAATTACGACTGGCTAACCAGCTCAGGTAACTTAGCTGTGCTTAATAAT GGGATAGAGTTTGCGGCAACTTATTTCATTATGTTGTTGGCACTCTTTACCTTAGGCGGCGGTCGTTACACTAGCCTAGA TTATTTTATCGCTAAGCGCTGCGGGGTTAAGTAA
Upstream 100 bases:
>100_bases GAAAAAGAGGCGAGTGCAAAAAAAGCCTAGGCCATGAAAGATTTATTGACTTGCTAGGGTCTATTCCTGCAAGCCAATAA ATTAGTCAAAGAGAGACACT
Downstream 100 bases:
>100_bases GCCTTTTATAAAGAGCTCTCGATTTTAAATAGCAATCAAAGCGTTAAATCCCACCCATGCGGTGGGATTTTTTTATGCCT CTTTGCCAGCAATTTGCTAT
Product: DoxX family protein
Products: NA
Alternate protein names: DoxX Subfamily; DoxD-Like Family Protein; DoxX Protein
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGLPMPAVMAGLAAGTEFFGAIL LLLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSWLANDRVLEAGDKLAKAKEILQEHGNYDWLTSSGNLAVLNN GIEFAATYFIMLLALFTLGGGRYTSLDYFIAKRCGVK
Sequences:
>Translated_197_residues MPLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGLPMPAVMAGLAAGTEFFGAIL LLLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSWLANDRVLEAGDKLAKAKEILQEHGNYDWLTSSGNLAVLNN GIEFAATYFIMLLALFTLGGGRYTSLDYFIAKRCGVK >Mature_196_residues PLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGLPMPAVMAGLAAGTEFFGAILL LLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSWLANDRVLEAGDKLAKAKEILQEHGNYDWLTSSGNLAVLNNG IEFAATYFIMLLALFTLGGGRYTSLDYFIAKRCGVK
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21477; Mature: 21346
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGL CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCC PMPAVMAGLAAGTEFFGAILLLLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCH LANDRVLEAGDKLAKAKEILQEHGNYDWLTSSGNLAVLNNGIEFAATYFIMLLALFTLGG HHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHCCC GRYTSLDYFIAKRCGVK CCCHHHHHHHHHHCCCC >Mature Secondary Structure PLASLYQKLLNMSRYFDGVAPLALRIYLAPVLMQAGYNKLAHFDDTVAWFANPDWGLGL CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCC PMPAVMAGLAAGTEFFGAILLLLGLATRLISIPLMVTMLVAAFTVHWPNGWLAIADGSSW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCH LANDRVLEAGDKLAKAKEILQEHGNYDWLTSSGNLAVLNNGIEFAATYFIMLLALFTLGG HHCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHCCC GRYTSLDYFIAKRCGVK CCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA