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The map label for this gene is ycgB [H]

Identifier: 126174006

GI number: 126174006

Start: 2070751

End: 2072277

Strand: Reverse

Name: ycgB [H]

Synonym: Sbal_1779

Alternate gene names: 126174006

Gene position: 2072277-2070751 (Counterclockwise)

Preceding gene: 126174007

Following gene: 126174004

Centisome position: 40.42

GC content: 43.29

Gene sequence:

>1527_bases
ATGGGGATAACTAAATCAACACCTTGGACACCACTGAGCGATGGTCCTGACTGGAGCTTCGAGCTACTGCAGGACTACCT
CAAGGAAATTGAACGGGTAGCAGCACTGTATAAGCTCAGCACTTACCCAAATCAAATTGAAGTCATCACCGCTGAGCAGA
TGATGGATGCTTATGCGGGCATAGGTATGCCCATTGGTTACACCCATTGGTCCTTTGGCAAACGTTTTATCGAAACCGAG
CAAGGTTACAAGCGCGGCCAAATGGGGCTTGCCTACGAAATTGTGATTAATTCTAACCCCTGTATTGCCTACCTTATGGA
GGAAAACACCATCACAATGCAGGCTCTGGTGATCGCCCACGCCTGTTTCGGACATAATAGCTTTTTTAAAAACAACTACT
TATTTAAGACATGGACAGATGCCAGCTCGATTATTGACTACCTTGTTTTTGCTAAAAACTACATCAGTGATTGCGAACAA
AAACATGGCGTTGCACAGGTCGAAAGCGTCATCGACTCCTGCCATGCGCTAATGAACTATGGTGTCGATCGCTATAAACG
CCCCTCAGAAATTTCATTCCGAGAAGAACAAGCAAGACAAAAAGATCGCGAGGCGTACCTTCAAAGCCAAGTTAATGATT
TATGGCGCACGATTCCTACCCAGCAACATGAACAGTCTCAATTGAAGAAACGTCGTTTCCCCGCAGAACCGCAGGAAAAC
ATCTTATATTTCATCGAGAAAAATGCCCCTTTACTGGAACCATGGCAAAGGGAAATTATCCGCATTGTACGTAAAATGGC
GCAATATTTTTACCCGCAAAAACAAACTCAAGTAATGAATGAAGGCTGGGCCACCTTCTGGCACTACACTATTTTGAATC
ACTTGTATGATGATGGCGTGGTCACTGACCGCTTCATTATCGAGTTTTTGCAAAGCCATACGGGCGTGGTTGCCCAACCC
GACTACAACAGTCGCTATTACAGTGGCATCAATCCCTATGCTTTAGGCTTTGCGATGTTTACTGACATTCGTCGAATTTG
TGAAAATCCGACCGATGAAGATAAAGCCTGGTTTCCCGACATTGCCGGCAGCAATTGGATTGAAACCTTACACTTTGCAA
TGCAGAACTTTAAAGACGAAAGTTTTATTAGCCAATATCTTTCACCAAAAGTCATCCGCCAATTTAAGTTGTTTGGTATC
CATGATGATGAGAAACGCAATTATCTGTCAGTATCGGCAATTCACGATGAACAAGGTTATCAAGATATTCGCCAGTTATT
ATCGCAGCAATATAACTTGTCGAATATTGAGCCGAATATCCAAGTGCATAATGTAGAGATCAACGGTGATAGATCCTTAA
CCTTACGTTATGTGCCGAATAACGATATTCCTTTAGCCAGCAGCCATAAAGAAGTATTAAAGCATTTACATAGATTATGG
GGTTTCACTGTCACCTTAGAGCAAAAAAATGGGGATGCGAGTGTGACCGTATTAGCATCCTGCCCTGAAGCGGCTAAACC
AGAATAA

Upstream 100 bases:

>100_bases
GCATTACGACAACATCGCCGTGCAGCACATACGTCAAGCCGAAGATATTTACCCTGTCTTTAGGGAGCTATTCAAGAAAC
AAGCGGTTTAAGGGGGCACT

Downstream 100 bases:

>100_bases
TAAACCGAATAAAAAAGCCGTTTCCATTGGAAACGGCTTTTATGTATTTATCGCTATTTTAATGCGACATCAATCGCAGC
AATTAATTATACTGTGCGAT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MGITKSTPWTPLSDGPDWSFELLQDYLKEIERVAALYKLSTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETE
QGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVIAHACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQ
KHGVAQVESVIDSCHALMNYGVDRYKRPSEISFREEQARQKDREAYLQSQVNDLWRTIPTQQHEQSQLKKRRFPAEPQEN
ILYFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVTDRFIIEFLQSHTGVVAQP
DYNSRYYSGINPYALGFAMFTDIRRICENPTDEDKAWFPDIAGSNWIETLHFAMQNFKDESFISQYLSPKVIRQFKLFGI
HDDEKRNYLSVSAIHDEQGYQDIRQLLSQQYNLSNIEPNIQVHNVEINGDRSLTLRYVPNNDIPLASSHKEVLKHLHRLW
GFTVTLEQKNGDASVTVLASCPEAAKPE

Sequences:

>Translated_508_residues
MGITKSTPWTPLSDGPDWSFELLQDYLKEIERVAALYKLSTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETE
QGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVIAHACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQ
KHGVAQVESVIDSCHALMNYGVDRYKRPSEISFREEQARQKDREAYLQSQVNDLWRTIPTQQHEQSQLKKRRFPAEPQEN
ILYFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVTDRFIIEFLQSHTGVVAQP
DYNSRYYSGINPYALGFAMFTDIRRICENPTDEDKAWFPDIAGSNWIETLHFAMQNFKDESFISQYLSPKVIRQFKLFGI
HDDEKRNYLSVSAIHDEQGYQDIRQLLSQQYNLSNIEPNIQVHNVEINGDRSLTLRYVPNNDIPLASSHKEVLKHLHRLW
GFTVTLEQKNGDASVTVLASCPEAAKPE
>Mature_507_residues
GITKSTPWTPLSDGPDWSFELLQDYLKEIERVAALYKLSTYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETEQ
GYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVIAHACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQK
HGVAQVESVIDSCHALMNYGVDRYKRPSEISFREEQARQKDREAYLQSQVNDLWRTIPTQQHEQSQLKKRRFPAEPQENI
LYFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVTDRFIIEFLQSHTGVVAQPD
YNSRYYSGINPYALGFAMFTDIRRICENPTDEDKAWFPDIAGSNWIETLHFAMQNFKDESFISQYLSPKVIRQFKLFGIH
DDEKRNYLSVSAIHDEQGYQDIRQLLSQQYNLSNIEPNIQVHNVEINGDRSLTLRYVPNNDIPLASSHKEVLKHLHRLWG
FTVTLEQKNGDASVTVLASCPEAAKPE

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=493, Percent_Identity=73.0223123732251, Blast_Score=800, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59141; Mature: 59010

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITKSTPWTPLSDGPDWSFELLQDYLKEIERVAALYKLSTYPNQIEVITAEQMMDAYAG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHC
IGMPIGYTHWSFGKRFIETEQGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVIAH
CCCCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHH
ACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKHGVAQVESVIDSCHALMNY
HHHCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GVDRYKRPSEISFREEQARQKDREAYLQSQVNDLWRTIPTQQHEQSQLKKRRFPAEPQEN
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
ILYFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGV
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC
VTDRFIIEFLQSHTGVVAQPDYNSRYYSGINPYALGFAMFTDIRRICENPTDEDKAWFPD
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
IAGSNWIETLHFAMQNFKDESFISQYLSPKVIRQFKLFGIHDDEKRNYLSVSAIHDEQGY
CCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCH
QDIRQLLSQQYNLSNIEPNIQVHNVEINGDRSLTLRYVPNNDIPLASSHKEVLKHLHRLW
HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
GFTVTLEQKNGDASVTVLASCPEAAKPE
CEEEEEEECCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
GITKSTPWTPLSDGPDWSFELLQDYLKEIERVAALYKLSTYPNQIEVITAEQMMDAYAG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHC
IGMPIGYTHWSFGKRFIETEQGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVIAH
CCCCCCCCCHHHHHHHHHHHCCHHCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHH
ACFGHNSFFKNNYLFKTWTDASSIIDYLVFAKNYISDCEQKHGVAQVESVIDSCHALMNY
HHHCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
GVDRYKRPSEISFREEQARQKDREAYLQSQVNDLWRTIPTQQHEQSQLKKRRFPAEPQEN
CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
ILYFIEKNAPLLEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGV
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCC
VTDRFIIEFLQSHTGVVAQPDYNSRYYSGINPYALGFAMFTDIRRICENPTDEDKAWFPD
HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
IAGSNWIETLHFAMQNFKDESFISQYLSPKVIRQFKLFGIHDDEKRNYLSVSAIHDEQGY
CCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCH
QDIRQLLSQQYNLSNIEPNIQVHNVEINGDRSLTLRYVPNNDIPLASSHKEVLKHLHRLW
HHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHH
GFTVTLEQKNGDASVTVLASCPEAAKPE
CEEEEEEECCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]