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The map label for this gene is cysS [H]

Identifier: 126173835

GI number: 126173835

Start: 1869367

End: 1870746

Strand: Direct

Name: cysS [H]

Synonym: Sbal_1601

Alternate gene names: 126173835

Gene position: 1869367-1870746 (Clockwise)

Preceding gene: 126173832

Following gene: 126173837

Centisome position: 36.46

GC content: 46.81

Gene sequence:

>1380_bases
ATGTTGAAGATTTACAACAGTATTACCCGCCAAAAACAGGAATTTAAGCCGATTACTCCCGGAAAAATCGGGATGTACGT
GTGTGGTGTGACCATATACGATCTCTGTCATATTGGTCATGGCCGTACTTTTGTTTCCTTTGACATGATCGTGCGCTACC
TGCGTTACGCGGGTTATGAAGTGAATTTTCAGCGCAATATTACCGATGTTGATGACAAAATCATCAAGCGCGCTAACGAG
AATAACGAAAGCTGTGAAGCCTTAACCGAGCGTTTGATCGGTGAAATGCATCAAGACTTCGATGCCTTAAATATGTTGCG
CCCAGACTTTGAACCGCGCGCAACCCTGCATATTGCCGAAATCATCGACATGGTTGAGTTATTACTCGCCCGTGGCCATG
CCTATGTGGCGAGCGATGGTGATGTGCTTTTCAGCGTGGCTTCCTATCCTGATTACGGCCGTTTATCAGGCCAGAATTTA
GATCAACTGCAAGCCGGTGCTCGGGTTGAAGTGGACGAAACCAAACAAAATCCAATGGATTTTGTGTTGTGGAAAATGTC
TAAACCTGGCGAACCGACGTGGGAATCGCCATGGGGACCGGGTCGTCCTGGCTGGCATATTGAATGTTCGGCCATGAACA
GCAAACATTTGGGTCTGCATTTTGATATTCATGGCGGCGGCTCTGACTTACAGTTCCCGCACCATGAGAACGAAATCGCC
CAGTCTTGCTGTGCCCATGACACACCATACGTGAACTATTGGATGCACACTGGTATGGTGATGGTTGACCGTGAAAAAAT
GTCTAAGTCGTTAGGCAATTTCTTCACTATTCGTGATGTACTTGGTCACTATGATGCTGAAACTGTGCGTTATTTCCTGT
TATCTGGCCATTATCGTAGCCAACTGAACTATTCAGAAGATAACTTAAAACAAGCTCGCTCAGCCTTAGAGCGTTTGTAT
ACGGCTATTAAAGATGTCGACTTAACTGTCGCTGCGGCGCCAGCAGAAGAGTTTGTCGCGAAATTTAAAGCGGCGATGGA
TGATGACTTTAATACGCCTGAAGCCTACTCAGTCCTGTTTGACATGGTACGTGAGATCAATCGCTTAAAACTGACCGATA
TGGCACAGGCATCGGCATTAGCAGTCACCTTGAAGCAATTAGCGGATGTTTTAGGCTTATTAAGCCAAGAGCCTGAAGCT
TTCTTCCAAGGCGGCGGTAGTTATGATGAAGTGGCTGAAATCGAAGCTTTAATCGTTGAACGTAACCGTGCTCGTACTGA
AAAGGACTGGGCTGCTGCGGATGTGGCGCGTAACTGTTTGAATGAGTTAGGCGTTGAGCTCGAAGATGGCCCAAGTGGCA
CCACTTGGCGCAAGAAATAA

Upstream 100 bases:

>100_bases
ATCTCGGATTGCGCGCAAAGTGCAGTATTCAAAACCTGTCAGGCCGTGGTAGACTGACTCCTTGATTTTACACCTGAATG
TATCATTGAAGAGAATATCG

Downstream 100 bases:

>100_bases
GCTTAGTTAGTTGTTTTCTCTCATCTAGATGAAATCTTCAGCCATAAAAAAACCTGCATCATGCAGGTTTTTTTATGCTT
GCAGAACTTAGAACTTAGAA

Product: cysteinyl-tRNA synthetase

Products: NA

Alternate protein names: Cysteine--tRNA ligase; CysRS [H]

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEVNFQRNITDVDDKIIKRANE
NNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNL
DQLQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA
QSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLY
TAIKDVDLTVAAAPAEEFVAKFKAAMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEA
FFQGGGSYDEVAEIEALIVERNRARTEKDWAAADVARNCLNELGVELEDGPSGTTWRKK

Sequences:

>Translated_459_residues
MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEVNFQRNITDVDDKIIKRANE
NNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNL
DQLQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA
QSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLY
TAIKDVDLTVAAAPAEEFVAKFKAAMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEA
FFQGGGSYDEVAEIEALIVERNRARTEKDWAAADVARNCLNELGVELEDGPSGTTWRKK
>Mature_459_residues
MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYEVNFQRNITDVDDKIIKRANE
NNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNL
DQLQAGARVEVDETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA
QSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLY
TAIKDVDLTVAAAPAEEFVAKFKAAMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEA
FFQGGGSYDEVAEIEALIVERNRARTEKDWAAADVARNCLNELGVELEDGPSGTTWRKK

Specific function: Unknown

COG id: COG0215

COG function: function code J; Cysteinyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI13375695, Length=384, Percent_Identity=39.5833333333333, Blast_Score=252, Evalue=5e-67,
Organism=Homo sapiens, GI10835051, Length=413, Percent_Identity=32.6876513317191, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI21269877, Length=413, Percent_Identity=32.6876513317191, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI303304987, Length=413, Percent_Identity=32.6876513317191, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI62240992, Length=413, Percent_Identity=32.6876513317191, Blast_Score=194, Evalue=1e-49,
Organism=Escherichia coli, GI1786737, Length=461, Percent_Identity=73.5357917570499, Blast_Score=703, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17509795, Length=237, Percent_Identity=40.084388185654, Blast_Score=175, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17509797, Length=237, Percent_Identity=40.084388185654, Blast_Score=175, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6324082, Length=304, Percent_Identity=36.5131578947368, Blast_Score=194, Evalue=3e-50,
Organism=Drosophila melanogaster, GI19922218, Length=499, Percent_Identity=35.6713426853707, Blast_Score=267, Evalue=1e-71,
Organism=Drosophila melanogaster, GI19922364, Length=308, Percent_Identity=36.038961038961, Blast_Score=179, Evalue=4e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015803
- InterPro:   IPR015273
- InterPro:   IPR014729
- InterPro:   IPR009080 [H]

Pfam domain/function: PF09190 DALR_2; PF01406 tRNA-synt_1e [H]

EC number: =6.1.1.16 [H]

Molecular weight: Translated: 51930; Mature: 51930

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCE
VNFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAE
EEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMD
HHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCE
FVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHH
QSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRS
HHHHCCCCCCCHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCHHHH
QLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFVAKFKAAMDDDFNTPEAYSVLF
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHH
DMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGGGSYDEVAEIEALIVE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHH
RNRARTEKDWAAADVARNCLNELGVELEDGPSGTTWRKK
HHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
>Mature Secondary Structure
MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE
CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCE
VNFQRNITDVDDKIIKRANENNESCEALTERLIGEMHQDFDALNMLRPDFEPRATLHIAE
EEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
IIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDETKQNPMD
HHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCEEEECCCCCCCCE
FVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPHHENEIA
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHHHH
QSCCAHDTPYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLGHYDAETVRYFLLSGHYRS
HHHHCCCCCCCHHHHHCCEEEEEHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCHHHH
QLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFVAKFKAAMDDDFNTPEAYSVLF
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHH
DMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGGGSYDEVAEIEALIVE
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHH
RNRARTEKDWAAADVARNCLNELGVELEDGPSGTTWRKK
HHHCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA