| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is kefC [H]
Identifier: 126173552
GI number: 126173552
Start: 1493126
End: 1494895
Strand: Direct
Name: kefC [H]
Synonym: Sbal_1314
Alternate gene names: 126173552
Gene position: 1493126-1494895 (Clockwise)
Preceding gene: 126173551
Following gene: 126173554
Centisome position: 29.12
GC content: 49.27
Gene sequence:
>1770_bases ATGGAACAGTCGAGTTTACTCACGTCGGTGCTGCTATTTTTATTGGCGGCGGTTATTTTTGTTCCTTTGGGTAAACGTTT TGGCGCAGGCCCGATTCTTTCCTACCTAGGTGCTGGCATCATTTTAGGCCCAGGCGGCATGGCCTTAGTTTCTGATCCTG CTGCTGTGTTGCATTTTGCCGAGTTAGGTGTAGTGCTGATGTTGTTTGTACTTGGACTCGAATTAAATCCAAGTAAATTA TGGGAACTTCGCAGTGCTATCTTTGGTTTAGGCAGTGGTCAATTGTTGTTGTCATGGGCTGCGATTGGTGGTTTAGCTTG GGGCTTTGGCTTGTCTGTTGATGCAGCTTTAGTGGTTGGCGCCGCGCTATCTTTATCATCGACAGCCTTTGCCGTGCAGT TAATGAGTGAGCATAGGTTGCTCACAACCCCACTCGGGCGTGATGCCTTTGGTGTCTTGTTAATGCAAGATCTTGCCGTT ATCCCCATGTTGCTGCTGACGGCATATTTGGCGCCCAATTCGGCGCAGATTGAACATCATGCCGTGCCTTGGTACTGGAC GTGTCTAGCCCTAGTAGGGTTTGTGTTAGTGGGCAAATACTTACTGCCAACACTCCTTAAGTTAGTCGCAAGTAGCGGGG TGCGTGAAGTACTCACCGCCTTTGCGTTACTGCTCGTGATGGGCAGCGCTGAGTTAATGGAGTGGCTTGGACTTTCCGCG GGTATGGGGGCATTTTTGGCGGGTATTATGCTCGCAAACTCAAGTTATCGACATCAACTCGAAACCGACATCGAACCCTT TAAAGGCTTATTGCTTGGGCTGTTTTTCATGGCGGTCGGTATGAGTATGGATTTGAAATTATTGATATCAGATCCGTTAC TTATCTTAGGTATTTTAATGGCGATGCTGCTGATTAAAACGTTTGTGCTGATGGTGCTGGGCCGCATTCGGCACCACAAA TGGCGACCGAGTATTGCATTGGGGTTGATCCTTGCCGAAGGCGGTGAATTTGCCTTTGTGCTGTTATCCCAGGCGCAGTT ATCTGGCATTGTCGGCGATAAAATTGCGCAAGTGCTAGTGCTGGCGATTGGTTTATCTATGGCGGTGACGCCGATATTGT TTACCCTGTTTCGCGCAACTAAGGCCAAGGTGGTGGACACTCGCCTGCCAGATACGATTAATGTCACGGAATCGGAAGTG GTGATTGCCGGTTTTGGCCGAGTAGGCCAGATAACCGGGCGTATTTTGGCCTCATCAGGGATCCCTTTTGTCGCCTTGGA TAAGGATGCGAGTCATGTGGATGTGATTCGCAAATATGGCGGTGAGGTCTATTTTGGTGATGCCAGACGCTTAGACATGT TGATGTCGGCGGGGATCGCGCGCTCGCGTTTGTTATTGCTGGCCGTGGACAGTGTTGAGGATTCCATCGAAATCGCCCAG CAAGTGAAAACCCATTTCCCTCATATCCACATAGTCGCGCGGGCAAGGGATCGTAACCATGCTTATCGTTTGATGAGCCT TGGGGTGACAGATGTGTTTCGTGAGACCTTTGGTTCAGCGCTTTCGGCCAGCGAGAAGATCCTCCAAGGTTTAGGTCTAT CTCAGGTACAAGCCAACGAGCGGGTAAAAATCTTTGCTGAGCATGATAAGAAACTGGTGATTGCGAGCGCAGCACATCAA AATGATTTAGCGACGTTAATCAATCTATCGAATAAGGGGAAGGCAGAGTTGGAATCCCTTATGCGCGGCGATAGGGAGAA TGTCAGTTAA
Upstream 100 bases:
>100_bases TTGTTAATAAATAAATGGGATATCATAGTTGCTAATTCGCCTAGCTGCGGCTGGGCTATTATATGGAACACTGCGCATTC CTTTTTCCGTTGGAGCCTTC
Downstream 100 bases:
>100_bases TACGCTGGGTATCATTTGCCATTATCGATTAAGGATTTAGATGTCAAAAGAGAGCATAAATGCTCTCTTTTTTGTTGGAA ACATATCGACTTTCGCGCTG
Product: potassium efflux system protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MEQSSLLTSVLLFLLAAVIFVPLGKRFGAGPILSYLGAGIILGPGGMALVSDPAAVLHFAELGVVLMLFVLGLELNPSKL WELRSAIFGLGSGQLLLSWAAIGGLAWGFGLSVDAALVVGAALSLSSTAFAVQLMSEHRLLTTPLGRDAFGVLLMQDLAV IPMLLLTAYLAPNSAQIEHHAVPWYWTCLALVGFVLVGKYLLPTLLKLVASSGVREVLTAFALLLVMGSAELMEWLGLSA GMGAFLAGIMLANSSYRHQLETDIEPFKGLLLGLFFMAVGMSMDLKLLISDPLLILGILMAMLLIKTFVLMVLGRIRHHK WRPSIALGLILAEGGEFAFVLLSQAQLSGIVGDKIAQVLVLAIGLSMAVTPILFTLFRATKAKVVDTRLPDTINVTESEV VIAGFGRVGQITGRILASSGIPFVALDKDASHVDVIRKYGGEVYFGDARRLDMLMSAGIARSRLLLLAVDSVEDSIEIAQ QVKTHFPHIHIVARARDRNHAYRLMSLGVTDVFRETFGSALSASEKILQGLGLSQVQANERVKIFAEHDKKLVIASAAHQ NDLATLINLSNKGKAELESLMRGDRENVS
Sequences:
>Translated_589_residues MEQSSLLTSVLLFLLAAVIFVPLGKRFGAGPILSYLGAGIILGPGGMALVSDPAAVLHFAELGVVLMLFVLGLELNPSKL WELRSAIFGLGSGQLLLSWAAIGGLAWGFGLSVDAALVVGAALSLSSTAFAVQLMSEHRLLTTPLGRDAFGVLLMQDLAV IPMLLLTAYLAPNSAQIEHHAVPWYWTCLALVGFVLVGKYLLPTLLKLVASSGVREVLTAFALLLVMGSAELMEWLGLSA GMGAFLAGIMLANSSYRHQLETDIEPFKGLLLGLFFMAVGMSMDLKLLISDPLLILGILMAMLLIKTFVLMVLGRIRHHK WRPSIALGLILAEGGEFAFVLLSQAQLSGIVGDKIAQVLVLAIGLSMAVTPILFTLFRATKAKVVDTRLPDTINVTESEV VIAGFGRVGQITGRILASSGIPFVALDKDASHVDVIRKYGGEVYFGDARRLDMLMSAGIARSRLLLLAVDSVEDSIEIAQ QVKTHFPHIHIVARARDRNHAYRLMSLGVTDVFRETFGSALSASEKILQGLGLSQVQANERVKIFAEHDKKLVIASAAHQ NDLATLINLSNKGKAELESLMRGDRENVS >Mature_589_residues MEQSSLLTSVLLFLLAAVIFVPLGKRFGAGPILSYLGAGIILGPGGMALVSDPAAVLHFAELGVVLMLFVLGLELNPSKL WELRSAIFGLGSGQLLLSWAAIGGLAWGFGLSVDAALVVGAALSLSSTAFAVQLMSEHRLLTTPLGRDAFGVLLMQDLAV IPMLLLTAYLAPNSAQIEHHAVPWYWTCLALVGFVLVGKYLLPTLLKLVASSGVREVLTAFALLLVMGSAELMEWLGLSA GMGAFLAGIMLANSSYRHQLETDIEPFKGLLLGLFFMAVGMSMDLKLLISDPLLILGILMAMLLIKTFVLMVLGRIRHHK WRPSIALGLILAEGGEFAFVLLSQAQLSGIVGDKIAQVLVLAIGLSMAVTPILFTLFRATKAKVVDTRLPDTINVTESEV VIAGFGRVGQITGRILASSGIPFVALDKDASHVDVIRKYGGEVYFGDARRLDMLMSAGIARSRLLLLAVDSVEDSIEIAQ QVKTHFPHIHIVARARDRNHAYRLMSLGVTDVFRETFGSALSASEKILQGLGLSQVQANERVKIFAEHDKKLVIASAAHQ NDLATLINLSNKGKAELESLMRGDRENVS
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=396, Percent_Identity=27.2727272727273, Blast_Score=81, Evalue=3e-15, Organism=Escherichia coli, GI1786232, Length=595, Percent_Identity=43.3613445378151, Blast_Score=471, Evalue=1e-134, Organism=Escherichia coli, GI1789749, Length=593, Percent_Identity=41.8212478920742, Blast_Score=399, Evalue=1e-112, Organism=Escherichia coli, GI1786685, Length=529, Percent_Identity=28.1663516068053, Blast_Score=162, Evalue=7e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR006036 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 63174; Mature: 63174
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQSSLLTSVLLFLLAAVIFVPLGKRFGAGPILSYLGAGIILGPGGMALVSDPAAVLHFA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEECCCCCEEECCHHHHHHHH ELGVVLMLFVLGLELNPSKLWELRSAIFGLGSGQLLLSWAAIGGLAWGFGLSVDAALVVG HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH AALSLSSTAFAVQLMSEHRLLTTPLGRDAFGVLLMQDLAVIPMLLLTAYLAPNSAQIEHH HHHHHCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AVPWYWTCLALVGFVLVGKYLLPTLLKLVASSGVREVLTAFALLLVMGSAELMEWLGLSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCC GMGAFLAGIMLANSSYRHQLETDIEPFKGLLLGLFFMAVGMSMDLKLLISDPLLILGILM CHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH AMLLIKTFVLMVLGRIRHHKWRPSIALGLILAEGGEFAFVLLSQAQLSGIVGDKIAQVLV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHH LAIGLSMAVTPILFTLFRATKAKVVDTRLPDTINVTESEVVIAGFGRVGQITGRILASSG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCC IPFVALDKDASHVDVIRKYGGEVYFGDARRLDMLMSAGIARSRLLLLAVDSVEDSIEIAQ CCEEEECCCCHHHHHHHHHCCEEEECCHHHHHHHHHCCHHHHEEEEEEECCHHHHHHHHH QVKTHFPHIHIVARARDRNHAYRLMSLGVTDVFRETFGSALSASEKILQGLGLSQVQANE HHHHHCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC RVKIFAEHDKKLVIASAAHQNDLATLINLSNKGKAELESLMRGDRENVS CEEEEEECCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MEQSSLLTSVLLFLLAAVIFVPLGKRFGAGPILSYLGAGIILGPGGMALVSDPAAVLHFA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEECCCCCEEECCHHHHHHHH ELGVVLMLFVLGLELNPSKLWELRSAIFGLGSGQLLLSWAAIGGLAWGFGLSVDAALVVG HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH AALSLSSTAFAVQLMSEHRLLTTPLGRDAFGVLLMQDLAVIPMLLLTAYLAPNSAQIEHH HHHHHCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC AVPWYWTCLALVGFVLVGKYLLPTLLKLVASSGVREVLTAFALLLVMGSAELMEWLGLSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCCC GMGAFLAGIMLANSSYRHQLETDIEPFKGLLLGLFFMAVGMSMDLKLLISDPLLILGILM CHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH AMLLIKTFVLMVLGRIRHHKWRPSIALGLILAEGGEFAFVLLSQAQLSGIVGDKIAQVLV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHH LAIGLSMAVTPILFTLFRATKAKVVDTRLPDTINVTESEVVIAGFGRVGQITGRILASSG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCC IPFVALDKDASHVDVIRKYGGEVYFGDARRLDMLMSAGIARSRLLLLAVDSVEDSIEIAQ CCEEEECCCCHHHHHHHHHCCEEEECCHHHHHHHHHCCHHHHEEEEEEECCHHHHHHHHH QVKTHFPHIHIVARARDRNHAYRLMSLGVTDVFRETFGSALSASEKILQGLGLSQVQANE HHHHHCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC RVKIFAEHDKKLVIASAAHQNDLATLINLSNKGKAELESLMRGDRENVS CEEEEEECCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA